BGIOSGA000679

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Revision as of 10:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000679| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000679, complete gene.| tag = OS01G07...")
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Gene Name

BGIOSGA000679

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000679, complete gene.

LocusTag

OS01G0786900

Ensembl Transcript ID

BGIOSGA000679-TA

Ensembl Protein ID

BGIOSGA000679-PA

Length

4572

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36824602..36829173

Sequence Coding Region

36828988..36829173,36827742..36828203,36827246..36827662,36826274..36826510,36825375..36826202
,36825101..36825267,36824602..36824917

Genome Context

<gbrowseImage1> name=IndicaChromosome01:36824602..36829173 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:36824602..36829173 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGAGCGGCGCGCAGGCTCCTCGAGGCGGCGGAGGCGGCGGGGCCTTCTCGAAGCGGACGCTGTCCGGCTACATGAGGATCATGTCGTCGGGGGCGTCCACGGCCGCGTCCAGCCTGCTGTCGGTGGGCGCGTCGCTGGTGAACTCGATCGCCAGCCACGACGAGGATGGGAGCCGTGACCAGGTACAATGGGCTGGATTTGATAAACTTGAATGTGGGGGTGACATGCTGCGACAGGTTTTACTTCTAGCTTACAGATCTGGTTTCCAAGTATGGGATGTTGAACATGCTAATGATGTAAGACAGCTAGAATCCAGACATGATGGTACAGTTTCTTTCATGCAACTCCTAAAGAAACCAATTGCCTCTACAAACAGTGAAGACAAATTTGCAGATGAACGGCCACTGTTAGCTCTTGCTTGTGATGGAACTAGCACAGGAAGTCTAATCAGCAATGATGGCAATGGCCCTGTTCCCAATGGAGCCAATGGTACTCTCCATAATATTGGCCATGAGAATCATCCTACTGTACTTCGGTTTTATTCATTAAGGGTCCATGATTACGTGCATACAATAAAGTTCAGATCAACTGTTTATTCCATACGGTGCAGTTCTAGAGTTGTAGCTGTATCTCAGGCTAATCAGATACATTGTTTTGATGCTGCAACACTGGAGAGAGAATACACAATCCTTACCAGTCATATAGTTCCACCAATTTCAAGTTATGGACCACTTGCACTGGGTCCTAGATGGATTGCATATTCTGGGAATCCAGTCCCAGTTCCGGATACAGGCCGTGTTACCCCTCAGCTTCTTAATCTATCTCCCCTAGTTCCACAACCTGGTTCAAATGGCAGTGTTGTGGCATACTATGCAAAAGAATCAAGCAAGCAACTGGCTTCTGGCATTATAACACTTGGTGATGTTGGATATAAGAAGTTGTCCAAGTATTGTTCAGACTTAATTCCAAGTAGTAACAATGTTATAAACCAAAGGAATTCTGGCTTCAAAGCAAATGGGGCAACAATAAACGGGCATACAGACAGCGAATATGCTGGAATGGTTATTGTTCGAGATATTGTCTCTAAATCAATGGTGGTTCAGTTCAGGGCACATACTAGCCCCATTTCAGCACTCTGTTTTGATCCCAGTGGAACTTTGTTGGTGACAGCTTCAATTCACGGTCGAAATATCAATGTTTTCCGCATTCTGCCTTCTTCGCATGGGAGTTCATCAGAAGCTGGTCCAAATGGAACCTGTGTTCATCTGTACAAATTGCAAAGAGGCATCACCAATGCGGTCATAAAAGATATCAGTTTTAGTGACGACAGTGAATGGATAATGATTAGCTCTTCAAGGGGAACTAGTCATTTCTTTGCAATATCTCCATATTGTGGATCAACAAGCTTTGACTACAACGAAAACAATCTTGCAGAAAATAGTTATGCGGTGGATTCATCAGTTAATCATACTGCCCATTGGTCCCAAAACTCAGCTCCCTCTCTGAGTCTCAATCAGAAGATACTCTCTGTTACGGGCCCCCCTGTAACATTGTCTGTTGTTAGTAGAATAAGAAATGGAGGCAACCTGTTGAAGGGCGCTGTTCATGGTGCTGCAGCATTTGCAACAGGTGTTTCCAGTCCAATTTCTGGTGCTATTGCTTCAACATTTCACAATTGCAAGGGTGCCGTCAAAAACTCAGATGGAAGTTCGCCTTGCATGAAGTATCATTTACTAGTATTTTCTCCATCTGGAAGCATCATTCAGTATGTTCTCCATCGCTCTGCAGAGCAGGATCCTGGAATTGATTTTCCCTCGAGTGCCATTCCTTATGGATCACAAAGAGAAACTGACACTAGGTTTATTATTGAGGCTCTTCAAAAGTGGGATGTTTGTCATAAAAGAAATCGAAGAGACGCTGCTGAGAGTTTTGTATATAGTGATTTTGACATCGGAGAAAACAGTAAACTTTTTCAGAAAGTGGCAAAGAAAGGAACTAGTGTTTATCCATCCAATGGCACTGCTGTTGAAAAGCAGAAGCTAGGTGATGAGAATCATAATTTTTATATTTCTGAGAGTGAATTGCAGACTCATGTTGTTCCAACACCACTCTGGTCAAGATCTGGGATGCATTTTCAAGTAATGGGGGATGGAGCTCTAGAAGCAGACAATACTGGTATAATTTCAGGTGAACTTGAAATAGAAAAGCTCCAGACTCGCAATATTGAATCTAGGTCAAAGAATCTTATACCAGTATTTGAATCTCTTCATACATCCAGGTTTCAACAGTCAAGGGTGAGCACACCTGATAGTAACAAATATGGATTGCTTCAGCGTCAAAAGTCCGGATTTTCAGAGGACGGTAGACTCTCCTGCAGAAGCAGTTCTAGCTCTTTGGACTGCATGTCTGAAGGCCCAATTAGCACTGATGATAATGGTTTTGGTCAATGTTTAGTAGAAGATAGTGGTGGTGCTGTAAATAAGAACCCAAATGTTAACCCCCGTTCCGAGCTTGTAAATAATACTCAGAGCCTTAACACAGAGGCCCAGCTCGGATTTGTAAATAACAAAGAGGATTGTGAAGACAGAGAGCAACTCCCAGATTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MRSGAQAPRGGGGGGAFSKRTLSGYMRIMSSGASTAASSLLSVGASLVNSIASHDEDGSRDQVQWAGFDKLECGGDMLRQVLLLAYRSGFQVWDVEHANDVRQLESRHDGTVSFMQLLKKPIASTNSEDKFADERPLLALACDGTSTGSLISNDGNGPVPNGANGTLHNIGHENHPTVLRFYSLRVHDYVHTIKFRSTVYSIRCSSRVVAVSQANQIHCFDAATLEREYTILTSHIVPPISSYGPLALGPRWIAYSGNPVPVPDTGRVTPQLLNLSPLVPQPGSNGSVVAYYAKESSKQLASGIITLGDVGYKKLSKYCSDLIPSSNNVINQRNSGFKANGATINGHTDSEYAGMVIVRDIVSKSMVVQFRAHTSPISALCFDPSGTLLVTASIHGRNINVFRILPSSHGSSSEAGPNGTCVHLYKLQRGITNAVIKDISFSDDSEWIMISSSRGTSHFFAISPYCGSTSFDYNENNLAENSYAVDSSVNHTAHWSQNSAPSLSLNQKILSVTGPPVTLSVVSRIRNGGNLLKGAVHGAAAFATGVSSPISGAIASTFHNCKGAVKNSDGSSPCMKYHLLVFSPSGSIIQYVLHRSAEQDPGIDFPSSAIPYGSQRETDTRFIIEALQKWDVCHKRNRRDAAESFVYSDFDIGENSKLFQKVAKKGTSVYPSNGTAVEKQKLGDENHNFYISESELQTHVVPTPLWSRSGMHFQVMGDGALEADNTGIISGELEIEKLQTRNIESRSKNLIPVFESLHTSRFQQSRVSTPDSNKYGLLQRQKSGFSEDGRLSCRSSSSSLDCMSEGPISTDDNGFGQCLVEDSGGAVNKNPNVNPRSELVNNTQSLNTEAQLGFVNNKEDCEDREQLPDL</aaseq>

Gene Sequence

<dnaseqindica>1..186#971..1432#1512..1928#2664..2900#2972..3799#3907..4073#4257..4572#ATGCGGAGCGGCGCGCAGGCTCCTCGAGGCGGCGGAGGCGGCGGGGCCTTCTCGAAGCGGACGCTGTCCGGCTACATGAGGATCATGTCGTCGGGGGCGTCCACGGCCGCGTCCAGCCTGCTGTCGGTGGGCGCGTCGCTGGTGAACTCGATCGCCAGCCACGACGAGGATGGGAGCCGTGACCAGGTTATTTCGCTTGATTTTAAACAATTCACTGTGCTCGTTGGTTTTTTTGGGCTGTGTTTTACTAGCATAGCAACTGCTAGCTTGGCAATAATTGTAGTACAACGGAAAAGCCTTTAGATGTCTCACCGTCTCACGTGTGCATTAGTGGTAACTGGTGCAAAATGAGCAAAGATTAATTATGGCTGTAGGGCGCAATCAGTTTCTGCTCCTGCCACCAAGGTGCTCACCATATGTGGCAGTATTAGTATTTATTGTTAGTGTTGATGCATTTATTTTGAGCACCATATAACAATCTGCCTATGTTTGAAATAGATAGTGCTTTTGGTAGTTACTAGCAATTGTCCAGCGGAAAGAAAAAATGGTGAGATGATTAGTGTGTTAACATTAACAATGCTAGCTGCAGATATTAATCCATTGAGTTATCATGAATATGAAAAGCTTCTTTTGAGCTTCGGCTATAATTCTCCTGGCCAAATAATTCCTATTTGGACAGCACATTATGATACGACGCTGCATATTATATGCCATTCCTAGTTCATCCAAATGGACAAATGTTGTGGCAGGAGTAGGGTCAGTCAAATCGTCCGGATGTACATAAACCGGTTGGATCTAAGTAAAAGATCCCCTTTTTAGTAGAAGTAATAATTCCTTGCAAAGGATCCATGTCTACAAAAACTAGCAAATACATGCAGAAGGGTAACTTTTCCTTTTGTTTGCATCCTCGGGAAATATTTTCATATAAAAATGTATTTACACCTGTCTTACATGTAAAATGTGGTTGCAGGTACAATGGGCTGGATTTGATAAACTTGAATGTGGGGGTGACATGCTGCGACAGGTTTTACTTCTAGCTTACAGATCTGGTTTCCAAGTATGGGATGTTGAACATGCTAATGATGTAAGACAGCTAGAATCCAGACATGATGGTACAGTTTCTTTCATGCAACTCCTAAAGAAACCAATTGCCTCTACAAACAGTGAAGACAAATTTGCAGATGAACGGCCACTGTTAGCTCTTGCTTGTGATGGAACTAGCACAGGAAGTCTAATCAGCAATGATGGCAATGGCCCTGTTCCCAATGGAGCCAATGGTACTCTCCATAATATTGGCCATGAGAATCATCCTACTGTACTTCGGTTTTATTCATTAAGGGTCCATGATTACGTGCATACAATAAAGTTCAGATCAACTGTTTATTCCATACGGTGCAGTTCTAGAGTTGTAGCTGTATCTCAGGCTAATCAGGTATGCCATACTCCACGCTTTTAACTTGGTGTTTGGATCATGAATAATCCTTTATGGAAAACAAAAATGCTTCTTGCAGATACATTGTTTTGATGCTGCAACACTGGAGAGAGAATACACAATCCTTACCAGTCATATAGTTCCACCAATTTCAAGTTATGGACCACTTGCACTGGGTCCTAGATGGATTGCATATTCTGGGAATCCAGTCCCAGTTCCGGATACAGGCCGTGTTACCCCTCAGCTTCTTAATCTATCTCCCCTAGTTCCACAACCTGGTTCAAATGGCAGTGTTGTGGCATACTATGCAAAAGAATCAAGCAAGCAACTGGCTTCTGGCATTATAACACTTGGTGATGTTGGATATAAGAAGTTGTCCAAGTATTGTTCAGACTTAATTCCAAGTAGTAACAATGTTATAAACCAAAGGAATTCTGGCTTCAAAGCAAATGGGGCAACAATAAACGGGCATACAGACAGCGAATATGCTGGAATGGTACAGATTTCATCTCAGTATATGTTGGTTACCAGCTTTGGATACTCTATTGTGATGTTTCTATATGCTAACCATATTAACAACCAACCAATTGAAGGCCATTGAGAAACCCATCTGACTAGTTGAGTAATCATCTGATGGTGCAGTTGGTGTTGTTCCTGTCTGATTGCACCATTCAGCCCTAACTCGCTGTCTCGCTGTGCATAAAAATGAAATTGTTTGTCATTTTATTTTGCAAACAACGAACTTTGAGTTAGTCTTGATGATTCCACCAAAAAGATTCTGTTTTGTTAAAGGCATAATGAGAATTACTGTTAACAACTTATACCTCAATGCAACATGAATTTAAGTTTTCCCCTTCTGCTTAAACCTAGCAAAAGCAGGTGTTGTCGTAGGATAAATGGAAAGTTAATTCATCCTGTGGTCGTACTTTTGTCTTGGTGGAATTCAGATATAGAGTAAACTGACGATGGTGGATGTCAAAACTTATCCTGATTAAGTTGGTTAGTGATAGCGCTTATTTGTGACCAAAGGAGTTGTTTTATATATTAAAAAGTTGCCAGGAGTATTATTTCAAGATAGTTTTGTGCATATGCCACTGATATGCCATATCTCACTGACAATTGGTACTTATAGGATGGAGTGAACTTTCAGTGAGGATTTTATCCGTACTCATATTTGTCTTGCCAGCTTCATGGAACCGTGACATTTAGAATGTTCCCTTTCCAATGACAGGTTATTGTTCGAGATATTGTCTCTAAATCAATGGTGGTTCAGTTCAGGGCACATACTAGCCCCATTTCAGCACTCTGTTTTGATCCCAGTGGAACTTTGTTGGTGACAGCTTCAATTCACGGTCGAAATATCAATGTTTTCCGCATTCTGCCTTCTTCGCATGGGAGTTCATCAGAAGCTGGTCCAAATGGAACCTGTGTTCATCTGTACAAATTGCAAAGAGGCATCACCAATGCGGTAAGGTAGCGTACATATTTCTGGACTAGTCTAATTTTTAGTTTTGGTAACAATATCTCTTTTTACCATAGGTCATAAAAGATATCAGTTTTAGTGACGACAGTGAATGGATAATGATTAGCTCTTCAAGGGGAACTAGTCATTTCTTTGCAATATCTCCATATTGTGGATCAACAAGCTTTGACTACAACGAAAACAATCTTGCAGAAAATAGTTATGCGGTGGATTCATCAGTTAATCATACTGCCCATTGGTCCCAAAACTCAGCTCCCTCTCTGAGTCTCAATCAGAAGATACTCTCTGTTACGGGCCCCCCTGTAACATTGTCTGTTGTTAGTAGAATAAGAAATGGAGGCAACCTGTTGAAGGGCGCTGTTCATGGTGCTGCAGCATTTGCAACAGGTGTTTCCAGTCCAATTTCTGGTGCTATTGCTTCAACATTTCACAATTGCAAGGGTGCCGTCAAAAACTCAGATGGAAGTTCGCCTTGCATGAAGTATCATTTACTAGTATTTTCTCCATCTGGAAGCATCATTCAGTATGTTCTCCATCGCTCTGCAGAGCAGGATCCTGGAATTGATTTTCCCTCGAGTGCCATTCCTTATGGATCACAAAGAGAAACTGACACTAGGTTTATTATTGAGGCTCTTCAAAAGTGGGATGTTTGTCATAAAAGAAATCGAAGAGACGCTGCTGAGAGTTTTGTATATAGTGATTTTGACATCGGAGAAAACAGTAAACTTTTTCAGAAAGTGGCAAAGAAAGGAACTAGTGTTTATCCATCCAATGGCACTGCTGTTGAAAAGCAGAAGCTAGGTGATGAGAATCATAATTTTTATATTTCTGAGAGTGAATTGCAGACTCATGTTGTTCCAACACCACTCTGGTCAAGATCTGGGGTATTTTGCTTCACCAATTCCCTTACAATACAGTTCTCTTGTTCTGTTTGACTTCTACATGTTTGCACAATTGCACGCATAACACGTGTGTGTTGATTGATGTCCAGATGCATTTTCAAGTAATGGGGGATGGAGCTCTAGAAGCAGACAATACTGGTATAATTTCAGGTGAACTTGAAATAGAAAAGCTCCAGACTCGCAATATTGAATCTAGGTCAAAGAATCTTATACCAGTATTTGAATCTCTTCATACATCCAGGTTTCAACAGTCAAGGTATGCTATGCACTTTTATTTGGCAATTGATACATTAGGCATTAACTCAATAATGTAAGGCATCTTTCCTGCTGGTAAAGGCCAAATGATGTCGTGGATTTTTTAATGTACAAGAATGGTCTGTTGATACTTTTGGTTTTGTTAGCTCCCTCTCGTGCTAACCTTTTTCTTCTTTCCCTATAGGGTGAGCACACCTGATAGTAACAAATATGGATTGCTTCAGCGTCAAAAGTCCGGATTTTCAGAGGACGGTAGACTCTCCTGCAGAAGCAGTTCTAGCTCTTTGGACTGCATGTCTGAAGGCCCAATTAGCACTGATGATAATGGTTTTGGTCAATGTTTAGTAGAAGATAGTGGTGGTGCTGTAAATAAGAACCCAAATGTTAACCCCCGTTCCGAGCTTGTAAATAATACTCAGAGCCTTAACACAGAGGCCCAGCTCGGATTTGTAAATAACAAAGAGGATTGTGAAGACAGAGAGCAACTCCCAGATTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000679