BGIOSGA000687

From RiceWiki
Revision as of 10:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000687| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000687, complete gene.| tag = OsI_040...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000687

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000687, complete gene.

LocusTag

OsI_04010

Ensembl Transcript ID

BGIOSGA000687-TA

Ensembl Protein ID

BGIOSGA000687-PA

Length

7463

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36643727..36651189

Sequence Coding Region

36650431..36651189,36649752..36650313,36644995..36645170,36644678..36644761,36643727..36644038

Genome Context

<gbrowseImage1> name=IndicaChromosome01:36643727..36651189 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:36643727..36651189 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCTCCTCCCCGCTCTGCTGCTACCTGCTGCTCTTCGTCGTCGTCGTGGTGCTCACGGGCAGCTGCCGTGCCAGGGACACAGTCGTGCCCGGCCGCCCGCTCGCCGCGAACGAGACGCTGGTCTCGGGCGGCGACGCCAACTTCGTGCTCGGCTTCTTCACCCCGCCGGGCGCCAACAGCACCTACGTCGGCGTCTGGTACAACAAGGTCTCGGTCCGCACCGTCGTCTGGGTCGCCAACCGCGAGGACCCGCTCCCCGGCGACGTCGCGGACAACCCCGACGCCACGCTCTCCGTGTCGCCCACGGGCACGCTCGCCATTGTAGCGGGGAACTCGACCGTTGTGTGGTCGGTCACGCCGGCGGCCAAGCTGGCGAGCCCCACGGCCCGGATCATGGACAGCGGAAACCTGGTGATCGCGGACGGCGCTGGCGGTGGCGTGGCGTGGCAGGGGTTCGACTACCCGACCGACACGCTGCTCCCGGAGATGAGGCTGGGCGTCGACTACGTGAAGGGGAGGAACAGGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCCTCGCCGGGCCCCGTCGTGATGGCCATGGACACGTCCGGCGACCCCCAGGTGTTCATCTGGAACGGCGCCGAGAAGGTCTGGCGCTCCGGCCCCTGGGACGGCGTCCAGTTCACCGGCGTCCCGGACACCGTCACCTACTCCGGCTTCACCTTCAGCTTCATCAACAACGCCAAGGAAGTCACGTACAGCTTCCAGGTGCACAACGTGTCGATCATATCGAGGCTGGGGCTGAACAGCACGGGGAGCTACGGGCTGCTGCAGCGGTCGACGTGGGTGGAGGCGGCGGGGACGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGAGGTGTCCCCGTGCGGGGCCAACGGCGTGTGCGACACAAACAACCTGCCCGTCTGCTCCTGCCTCCGCGGCTTCACGCCCAAGTCGCCCGAGGCGTGGGCGCTGCGTGACGGCCGCGCGGGGTGCGTGCGGTCGACGCCGCTCGACTGCCAGAACGGCACCGACGGGTTCGTCGCCGTGGAGCACGCCAAGGTGCCCGACACGGAGCGGAGCGTCGTGGACCTGGGCCTCAGCCTGGAGCAGTGCCGGAAGGCGTGCCTCATGAACTGCTCCTGCACGGCGTACGCGAGCGCCAACGTGAGCGGTGGCGGCCGCGGCCACGGCGCCGGCACCGGCTGCGTCATGTGGACGACCGGGCTCACCGACCTGCGCGTGTACCCGGAGTTCGGCCAGGACCTCTTCGTCCGCCTCGCCGCCGCAGATCTCGGATCAAGCAAATGGAGCGGTGGTTCCCGCAGTACTGGTCGCCGCTATGAAGGAAGCAGTCATCACGATGATGATCTGGAACTTCCAATCTTTGATCTGGGGACAATTGCAGCTGCTACTGATGGTTTCTCAATCAACAACAAGCTCGGTGAGGGTGGCTTCGGACCAGTATACAAGGGTAAGCTCGAGGATGGACAAGAAATAGCAGTTAAAACGTTGTCCAAAACATCCGTACAGGGTCTCGACGAATTCAAGAATGAGGCATGGAGCTTATGGAATGAAGGAAAAAGCTTGGAGTTAGCAGATGAAACAATGAATGGCTCGTTCGACTCAGATGAAGTACTCAAATGCATCAGAGTGGGACTCCTATGTGTGCAAGAGAACCCAGATGACCGTCCATTGATGTCTCAGGTGCTTCTGATGTTAGCTACTACAGATGCTACCACATTGCCAACTCCTAAACAGCCTGGCTTTGCAGCTAGAAGAATTCTAATGGAAACAGACACATCATCAAGCAAGCCAGACTGCAGCATATTCGACAGTGCAACAGTTACTATACTTGAAGGTCGATAG</cdnaseq>

Protein Sequence

<aaseq>MASSSPLCCYLLLFVVVVVLTGSCRARDTVVPGRPLAANETLVSGGDANFVLGFFTPPGANSTYVGVWYNKVSVRTVVWVANREDPLPGDVADNPDATLSVSPTGTLAIVAGNSTVVWSVTPAAKLASPTARIMDSGNLVIADGAGGGVAWQGFDYPTDTLLPEMRLGVDYVKGRNRTLTAWKSPSDPSPGPVVMAMDTSGDPQVFIWNGAEKVWRSGPWDGVQFTGVPDTVTYSGFTFSFINNAKEVTYSFQVHNVSIISRLGLNSTGSYGLLQRSTWVEAAGTWNLYWYAPKDQCDEVSPCGANGVCDTNNLPVCSCLRGFTPKSPEAWALRDGRAGCVRSTPLDCQNGTDGFVAVEHAKVPDTERSVVDLGLSLEQCRKACLMNCSCTAYASANVSGGGRGHGAGTGCVMWTTGLTDLRVYPEFGQDLFVRLAAADLGSSKWSGGSRSTGRRYEGSSHHDDDLELPIFDLGTIAAATDGFSINNKLGEGGFGPVYKGKLEDGQEIAVKTLSKTSVQGLDEFKNEAWSLWNEGKSLELADETMNGSFDSDEVLKCIRVGLLCVQENPDDRPLMSQVLLMLATTDATTLPTPKQPGFAARRILMETDTSSSKPDCSIFDSATVTILEGR</aaseq>

Gene Sequence

<dnaseqindica>1..759#877..1438#6020..6195#6429..6512#7152..7463#ATGGCCTCCTCCTCCCCGCTCTGCTGCTACCTGCTGCTCTTCGTCGTCGTCGTGGTGCTCACGGGCAGCTGCCGTGCCAGGGACACAGTCGTGCCCGGCCGCCCGCTCGCCGCGAACGAGACGCTGGTCTCGGGCGGCGACGCCAACTTCGTGCTCGGCTTCTTCACCCCGCCGGGCGCCAACAGCACCTACGTCGGCGTCTGGTACAACAAGGTCTCGGTCCGCACCGTCGTCTGGGTCGCCAACCGCGAGGACCCGCTCCCCGGCGACGTCGCGGACAACCCCGACGCCACGCTCTCCGTGTCGCCCACGGGCACGCTCGCCATTGTAGCGGGGAACTCGACCGTTGTGTGGTCGGTCACGCCGGCGGCCAAGCTGGCGAGCCCCACGGCCCGGATCATGGACAGCGGAAACCTGGTGATCGCGGACGGCGCTGGCGGTGGCGTGGCGTGGCAGGGGTTCGACTACCCGACCGACACGCTGCTCCCGGAGATGAGGCTGGGCGTCGACTACGTGAAGGGGAGGAACAGGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCCTCGCCGGGCCCCGTCGTGATGGCCATGGACACGTCCGGCGACCCCCAGGTGTTCATCTGGAACGGCGCCGAGAAGGTCTGGCGCTCCGGCCCCTGGGACGGCGTCCAGTTCACCGGCGTCCCGGACACCGTCACCTACTCCGGCTTCACCTTCAGCTTCATCAACAACGCCAAGGAAGTCACGTACAGCTTCCAGGTATAAACTGACGGAGTACCCGTGCAATTTATGTGTACAACTTTTTAAATTTTATTGGAGTTGTACCGTACCGCTGGTGCCATGTCATATATGACACGCGTGCGCGTGTTCGTGTAGGTGCACAACGTGTCGATCATATCGAGGCTGGGGCTGAACAGCACGGGGAGCTACGGGCTGCTGCAGCGGTCGACGTGGGTGGAGGCGGCGGGGACGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGAGGTGTCCCCGTGCGGGGCCAACGGCGTGTGCGACACAAACAACCTGCCCGTCTGCTCCTGCCTCCGCGGCTTCACGCCCAAGTCGCCCGAGGCGTGGGCGCTGCGTGACGGCCGCGCGGGGTGCGTGCGGTCGACGCCGCTCGACTGCCAGAACGGCACCGACGGGTTCGTCGCCGTGGAGCACGCCAAGGTGCCCGACACGGAGCGGAGCGTCGTGGACCTGGGCCTCAGCCTGGAGCAGTGCCGGAAGGCGTGCCTCATGAACTGCTCCTGCACGGCGTACGCGAGCGCCAACGTGAGCGGTGGCGGCCGCGGCCACGGCGCCGGCACCGGCTGCGTCATGTGGACGACCGGGCTCACCGACCTGCGCGTGTACCCGGAGTTCGGCCAGGACCTCTTCGTCCGCCTCGCCGCCGCAGATCTCGGTACGCCATCACATTCCACGCGAACTATGTACTATGCATTGCTACATACGTACGTATATATCTACGTATTACGTGCATGTTTTACGTATTCCATGCATGCTGCGCTGCATATAGAATCTTTCCCATGTGTTTGGTGTTCGTTCCGTCCAAATCAGACAGCACAAAAGTACCGTCGAAGGCCAGATATTTGGGCCTCCTAGTCCATTCCTTTTTGGCTATCTCCCTCTAATCCTCCATAGCTCCAATCCCTCCTTTTTTGGGGAGAATCTCAATAGAAGATTAGAAAGAGATGATGAGTGCCACGCAGCGTGGCCTGCTTCAACCGAGAGAACTTGCTGCCCTGATCCATTTCACTGGAAGACGATCACGACATTGATTTTGATTCCGGCCATCTTTATTCCTTGCCCTTTAATCTCCTTTTCTCTCCATCATGAAACCGATCGATGTTAGCAAGGGAGAAAGGAAGCGAAAGGAGCTTTGATTAATTAGCCAGACAGCGATCGATACCATTTGGTCCCGGGCTCTTTCGAAGGCGGGGCGCTTATCGTCGCAAAAGAAGCACGCTTTGATTTTAGGAGCTATCGCGCGCAACAAAAGCTCAATTATACACGGTAGAGGAATGAGACGGCTTCCACGTCGATCTCTCCAACGTGCATCATATCACTGCACCTGCTAGCTCCCGTGCAGCATTCTCGAGTCGATCCATTGCTGCCCGGCCATTTGTGAGGCCCCTACTGATCGCCTCGACGTGTATCATCGACCAAAGGAGCCTTTTACATGGTGTGGGGCTTGCCCGATTTGGCAGCTAGTACAAAGATTAGAGGGCCCTGTACACCACAAGAGCGAAGTGTGGCCGTCGTCTTGATTGGTAGGTGAAATTTCGCCGGGAAGAAGATAAAGTAGCAGATCTTGGATAGCTCTAGTCAACAGCGACAAGACAAATAGACAATGATCCTCATTATTTGAGGAGATAGGCAGAGGCAGGGATTGCAGTAGATCTGTAGATGTACGTACAAATCTTTAGCTTATAAATTGGAAACGAATTTGATGGTCTGAAGTTTGAACTCACGGTGCAACTTGGAACTTAATTTGGATCTTACGCTTGTTGTGTTCAATAATAGTATTTTAAGACGATGGTAAGTTCACATGACAAAAAAAAAACTAAGAAGTACTCTCTTCGTCGTATAATATAATAACCTAGTATCAGATGCGATATATTCTAATGTCCCATTTAGTTTTGAACACATCCCTATGTTTTATTCAGTCCTATATTATTATAGTGTAGGAAAGAGGGAGTAGAAGTACTCCCTCCGTCCCATTATATCTGCAGTTGAGAATTCCTGCGTCTGATATTTGACCGTCCATCTTATTTAAAAAAATTTATGATTAATATTTTTATTTTTATTAGATGATAAAAATAAATAATACTTTATGCATGACTTATTTTTTAAAATTTTTTCATATTTTTTTCAAATAAGACAGATGGTCAAATGTTGTATATGAAAAATCCATGATTGCATTTAAAAGAGACGGAGGGATTAGTATACTAGTGGAAAGGAGGGAGTAGAAGTTCCTAGTACAACGAATTTGAACTGTTTGTCTAGATTTGTTGTACTAGGATGTCTCATATCCCACACCAAAATCCCTTATATACAGAGACAGAGGGAGTAGGAAGTTGTAGCTCGTTGGGAATTGGATTTGGAACCGGGTAGATCGATGTGAAGAATCTGCCCTTGCCGAGAGCTAGAAAACATCCCATCTGCCACAAAGCTCTACGTGGTAATCAAACAACCTAATGTCTCCTTCGGTTTTAGATTGTTGTAGTCTCTCCGTCCCATAATATAAGAGATTTTGGATAGATGTGACATATCCTAGTACAATGAATCTGGGCAGATTCATTGTATTAGGATATGTCATACCTACCTAAAATCTCTTATATTATGGGACAACCTAGTAGTGGATGTGACACATTCTAATACTATGAATTTGGATATACACATATTCAGATTCGTGGTAATAGGATGTCATATACTCCCTCCATCCCAAAATAAGTGCAGCCATGAGTTTCCGTGTTCAACTTTGATCGTCCGTCTTATTTGAAATTTTTTTATGATTTGATTTTTATTGTTGTTATATTATAAAATTAGCATGGTGTCCCTTGCAGATTGCGCGGCTAGGATCATTATATTTTCTCTCATATATTCTTATTTTTTTAATTCAGAATTTCCATTAATTCTAAATTGTATATCGATATGGACTCTAGTCTCATATTCCAATATTCATTATTTTTTAATTCTGAATTTCAGCTATTTCTAAATTGTATTTCTATATGGACTCTATTTTTCTTTTTCTTCAATTAATATGAGAATTTCTAGACCACGAGAACGAACGTGGAGGCTTTCTTTTTCTATTACTTTAATAAGTTAATAGATTATAAAACATAAATAGACTTTACGCTTGACTTATGTTTTTTAGTTTTTTGGAAAAAAATTCAAATAAGACGGACGATTAAAGTTGGACATGAAAACTCATGGCTACGCTTATTTTGGGACGGAGGGAGTACTATCATAGATTTGTTTTTTTATGAGACGGTGGGAGTAGGAAAGATGGAGCAGAAGTAGTAGCACTGCTTTGTTTAGTTTTTTTTTTCCAAAAACATCTCATCGAATCTTTGATACATGCATGGAGCATTAAATATTAGATAAAGAAAAAAACAAATTGCACAGTTTGCATAGAAATCGGAAGACAAAACTTTTGAGCCTAATTAGTCCATGATTAGCCATAAGTGCTATAGTAACCCACATGTGCTAATGACGGATTAATTAGGCTTAATAAATTCGTCTCGAGGTTTCCAGGTGATTTTTGAAATTAATTTTTTCATTTGTATCTGAAAACCCATTCCGACATCCGGTGAAATATCTGATGTGACACCCAAATTTATTTTTTCGCGATCTAAACAAGGACTTAGATTGTACTCCCTCCATCACATAAAAAACGAATCTAGAACCAAATGTGACATATTGTAGCATTACGAATCTAGACATAGTACTATGATGTTTTGAATTCTATACTAAGTTGGTTTTTTATGGGACGGAGGGAGTAGCTTCGTTGGGAATTGGATTTGGAACCGGACAGATCGATGCCAAGAATCTTCCCTCGCCGAGTCAAGCCAGAAAACATCCCAGCTGCCACAAGCTTCACGTCGCAATCAAACAACCATCGGTCGCTTCGCTTTATCGCCCAGCCGGGAGAGATATTTTCCGTGCAAAAACCACGCTCCAAAGCGACCGGCCGCCACCGCGCCACCCGCGACATGGCAGCGGCCAGCGGGGGTGGCCGGCCAATCGGCCATACGCCTCGCTTTCCAGCACACACTGCACGCGCGGCCGCGGGCGGCGTACCGGCCGAACCATCGAGACAGTGCATGGACAAATATGTGAACGTGTGATGCGTCGCCGGACGCCGGGCTCTGCGGCGTTGCTGGGCTAACCGAAAACACAAAGCGTGAAGGCCTCTGTGCCTCTAGAGAATTCAAAACCACAAATGTTCAAACGCTAGACACCGATAAATCCTTACGAAGAGGTTGGGTACTTGGGTAAACATGTTGAACTGGTTCATGGTTGATCACATATTCACATGCATTTGCCACTGTAGATTGCCTGTGATGCTGTAGCTCAAGGTTTCCAGGTGTACCTGAAACAGAGCATCTGACTCTGGTTTGGCATTGTTTCGAGGGCATCATATGTGGCACTACATGTTGTTCAGCGCGCTACTCTGCTCTACGAATAGGCCCCTATTCTTCTCGGCTTTTTCATCAGATTATTTGCTTCACAAAAAATATATTTTATTAAAAAAACCTTTCCAATAGCATTACTTAGGTGGTGTTTGAATCTCCTTAAGAAAAAGATTAAGTGTTTCACGTAAAACGAGATGATAATAACATATGATTAATTAAGTTTTAATTATTACAAACTTAAAAAATAGATTAATCTGATATATTATAACAGCTTTCATATAGAAAATTTTTACACGAAACGTACATTTTAGCAGTTTGAAAAGCGTGTCACTAGTATCCAAAAGTTTATTCAACTTTTGTTGGAGAAAAGAACATGGCCACTTCTTTTAAGATATTTATTTTTTTTAAAAAATATTCCTACAGTAAATAGATATTCTGTAGCAATAATCGTTCCATATTCCAAACCAAACAGGTAATACTGATTAAATGCTCATATATGGGGCAACTCATTATATTCCTCTAGATAAATTAGTCGACATGTCGATGCATACCATCATCGATTTAACAGCTACGTTTTTCTTGCACAGGTTTAACAAGCAAATCTAACAGGCACGTATAATAATCGCCATCGTTGTCAGCATCTCATCGGTGACGTTTCTGTCAGTTCTCGCTGGTTTTCTCGTCTGGACAAGAAAGAAGAAGAGAGCAAGAAAAACCGGTAATGGCCATGTGTCTTCCGAGTGTTAACAAGCAGATACTCCATATAAATACTTGAACAAAAAGAGGGGAAAATAATAAGCATATTTCAGGGTATCATACTCATACCGACTTCTATGTGATTATAGGATCAAGCAAATGGAGCGGTGGTTCCCGCAGTACTGGTCGCCGCTATGAAGGAAGCAGTCATCACGATGATGATCTGGAACTTCCAATCTTTGATCTGGGGACAATTGCAGCTGCTACTGATGGTTTCTCAATCAACAACAAGCTCGGTGAGGGTGGCTTCGGACCAGTATACAAGGTACAACACTACATGAACCACCCCAATGAATCACGCATAAACATGCAAACATTTTGAACGCAAGTTCAATGGCAACTCATGATTTTCGTTCAAAAAAATGGCAACTCATGATTTCAAGCATCAAAAGGCAATTATTTAAGGTCTTCAGCATATAAATGAACGAACAATGATAGCATAAAAAAAATGATCTTCTGAAATTTGAACTACAGCCGCTATGTCTGGTTGATCAACAGGGTAAGCTCGAGGATGGACAAGAAATAGCAGTTAAAACGTTGTCCAAAACATCCGTACAGGGTCTCGACGAATTCAAGAATGAGGTAATGTTGATAGCTAAACTTCAGCATAGGAATCTTGTTCGGCTTCTCGGCTTCAGCATTAGTGGACAAGAAAGGATACTTGTGTACGAATACATGGCAAACAAGAGCCTAGACTACTTTCTGTTCGGTATGACTATCTCAGTCTTTTTATGACCATGAAAAAAATGGCTGATAATACTGTGAAGAACATAACAGTTTGCAAATGTAACAGAAAAATCCAACAGTGTCCTGCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGGCACATAGTAAGTATGCTAAGTATTTACAACAGGAAATACTGATCGTATAAATGAATTTACTCATATATTTGCTTTATTCATTTTGGCTCTTTTGTAGTGGCTATATGTCTCCAGAATATGCAATGGACGGAGTCTTTTCTGTCAAATCAGATGTATTTAGTTTTGGAGTTTTACTACTGGAAATAATTAGTGGCAGGAGGAACAGAGGGGTTTATTCATATTCAAACCACCTAAATCTTCTGGGACATGTGAGAGCTTAAATCATCTACTACATGTTTGAATGGAAGTTGTTTTCTCAATTCAATTTCAGAGTAACTTCAAAAACTTTTTTTCTTTTTTTGCCCCTTAGGCATGGAGCTTATGGAATGAAGGAAAAAGCTTGGAGTTAGCAGATGAAACAATGAATGGCTCGTTCGACTCAGATGAAGTACTCAAATGCATCAGAGTGGGACTCCTATGTGTGCAAGAGAACCCAGATGACCGTCCATTGATGTCTCAGGTGCTTCTGATGTTAGCTACTACAGATGCTACCACATTGCCAACTCCTAAACAGCCTGGCTTTGCAGCTAGAAGAATTCTAATGGAAACAGACACATCATCAAGCAAGCCAGACTGCAGCATATTCGACAGTGCAACAGTTACTATACTTGAAGGTCGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000687