BGIOSGA000700

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Revision as of 10:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000700| Description = BGIOSGA000700| Definition = Oryza sativa Indica Group BGIOSGA000700, complete gene.| tag = | tid = BGIOSGA000700-TA|...")
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Gene Name

BGIOSGA000700

Description

BGIOSGA000700

Definition

Oryza sativa Indica Group BGIOSGA000700, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA000700-TA

Ensembl Protein ID

BGIOSGA000700-PA

Length

2577

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36509942..36512518

Sequence Coding Region

36512255..36512518,36511535..36511568,36511144..36511238,36510933..36510998,36510762..36510822
,36509942..36510102

Genome Context

<gbrowseImage1> name=IndicaChromosome01:36509942..36512518 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:36509942..36512518 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGCTGGAGAAGAAGGCGTTCGTGGTGGAGCTGTTCGACAAGTATGTCAAGACGCTCGGCTCCGGGATCGACGTGCTCGCCCCCCTCGTCGACCACATCGCCTACGTCCACTCGCTCAAGGAGGAGGCCATCCCCATCCCTGACCAGTCCGCCATCACCAAGGACAACGTCTCCATCCAGATCGACGGCGTCCTCTGCGTCAAGTGCCAGCGAGTGGCCTCCCTCATCAGGGCCACATATGAAGCACATCTTGCCTTCAAGAAGGCAGTTACAACTTCTGATGGGATATTCCTCAACTGGCGTGAACAAGATGTGTATCCTTGCAATTGGAAGTTCACCGCCATCTTCGACATTGGCAGCTCCAACCTCTGGGTGCCATCAGCCAATTGTTACTTCTCAGTTGCGTGCTTCTTCCACTCTCACTACAAGTCTGGGCAGTCAAGCACTTATCAGAAGAATGGAGATTCAAACACCACCTATATCTTACTCAACCGGGAGGATAGAGAGAGAACTAAGTCAAACAATCCAAGCGCCAGAGTGCAACAGAAACAATGGGGACTGATCAAATTTTGTCAGACTGCCGGGCAGCTCAACAAGGAGTCAAGGACACATTCGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MMSXXXXXXXXXXXXXXXXXVLEKKAFVVELFDKYVKTLGSGIDVLAPLVDHIAYVHSLKEEAIPIPDQSAITKDNVSIQIDGVLCVKCQRVASLIRATYEAHLAFKKAVTTSDGIFLNWREQDVYPCNWKFTAIFDIGSSNLWVPSANCYFSVACFFHSHYKSGQSSTYQKNGDSNTTYILLNREDRERTKSNNPSARVQQKQWGLIKFCQTAGQLNKESRTHSK</aaseq>

Gene Sequence

<dnaseqindica>1..264#951..984#1281..1375#1521..1586#1697..1757#2417..2577#ATGATGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGCTGGAGAAGAAGGCGTTCGTGGTGGAGCTGTTCGACAAGTATGTCAAGACGCTCGGCTCCGGGATCGACGTGCTCGCCCCCCTCGTCGACCACATCGCCTACGTCCACTCGCTCAAGGAGGAGGCCATCCCCATCCCTGACCAGTCCGCCATCACCAAGGACAACGTCTCCATCCAGATCGACGGCGTCCTCTGCGTCAAGGTTATAACTCGCTCCTCGCCTTAAGCCGTTTTTGCTTTGCTGCATTTCCAATTGCTGGTGGTGGTGGATTTAATGAGTTGTGTTGTGCGCGATCGAGCTTGCAATTTTGGGCGGCTCAAACTGGTGTGCTCGGTTTAGTGTCAGTAGCGTCGCGGAGGCTTGTGGATTGGGTTGTGGCTGTACCCTACTTTTGCTTGGTGGCGTCGGGGCCGGCAGTTGCGGCGGCTTTAGCTCTGGTCCTCCGGATGACTAGATGCGTCCTTGCATTTTGGTGGTTGCGAGCTGGAATTAGTAACTGCTTTGTTGTTTCTTCGGCTAACTAGGCTGGTCCCTTTTTTCTTTTTCAGAGGTAACTGAAAGATTGGGGTGACTAAATTGTTTTTCAAAACAGTAATTGGGGTGACTAAATTGTTTTTCAAAATTAAACGCTGTCCAAATTGTTTTTGTTAGAATTTTTGGGGAAATTTCAAATTGCATGTTCTAGGTAATTCAATTACCCTGAAACAATTTTGTGGAAGCACATTGAAATTCTTTTATTAATAAATTGTCATTCCTGGTTCTTATGGTCATCCATTTTGCTAAGGTAGAGCTATAAGTGTGTCACAGTGTACTGCATTTGATTATTGCTGCTCTGTTTATTTGATAACTTTGCATGATTGCTGATATGTTCCTGTTTTTACTTACAGTGCCAGCGAGTGGCCTCCCTCATCAGGGCCACATGTACATGTGGAGTTCATCTCCCATAAAAGAGGATCCACATAGTATACCTCACACATGAACTCTGTAATAAGCTGTGGTGATCTTTATATGCTTCACCAACTGGTGACCAATGGGCTCTTTTCTGAGAAAACAGCCCAGTTTCCTCTTAATTTTGTTAATTTTGCACCTTGGTGCTCGTGAGGCAAGTGCACTAAGTTCAGATGGTATGTGACAGTCCATAGTTATGGTTGGTATTTGTGTGGTACATTAGACAATCTGTGCTCATTTACTATGATTCTTTTGACGGTTTCCTACAGATGAAGCACATCTTGCCTTCAAGAAGGCAGTTACAACTTCTGATGGGATATTCCTCAACTGGCGTGAACAAGATGTGTATCCTTGCAATTGGAAGGTTGTTAGATGTCACAGTCACACCAAGAGAGTAATTTATCTGTAAGACCAAAATAAACCCTACATAAATATTGTGAAATACTTAAAATTTCAACCTGGCTATTATTTTTTTCCCTTTTGAATATGGCATTTTGTAATATAAAAAGTTCACCGCCATCTTCGACATTGGCAGCTCCAACCTCTGGGTGCCATCAGCCAATTGTTACTTCTCAGTGAGTCCCTGTTCGATGCACTGTTCAAGGGAAGTTCTCTTAAGAGTCTGTCAATTGCGACTTGTGCAGTTGTGCTAATGATGGATTTTTCCTGGTGATGATTGATGCAGGTTGCGTGCTTCTTCCACTCTCACTACAAGTCTGGGCAGTCAAGCACTTATCAGAAGAATGGTCTGTGTCTTAAAACTTTCCCCAACCGTGCTATTATTTGTGTTGTGAGTTTGCAACAATTTGGCTATCAGTCTATACTATTACATGGATGCACTGAAATCTTCCCCCTGTTTTTTTTTTTGTTATTTACTCTACAGCTGGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTTTTCTTATGTTCCCATAATTATATTGTGAACTAACAACTACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTTCCACATTCATATTGATGTTAATGAATCTAGAAGCATCACTGTAAATGTGAGAAATGTTAGAATGACTTCTATTATGAAACGGAGGAAGTAGGTGACGCGCGAAGTCACGTGCTTCCACCGGTAGCAACGGACGGACATTCTGCTACTATTATCAAAATAAATCTGCTAACAAACGTTGGATAAACTTTTGGATACTCGTGGCACGCTTTTTAAACAGCTAAACGGTTCGTTTCGTGTGAAAACTTTCTATATGAAAGTTGTTCTAAAATATCATATTAATCTATTTTTCAAGTTTGTAATGATTAAAGCTTAATTACTCACACGTTATTACCACCTCGTTTGTGTGAAACATTTAATTTTTATCTTTATTTTTATCTTCAGGAGATTCAAACACCACCTATATCTTACTCAACCGGGAGGATAGAGAGAGAACTAAGTCAAACAATCCAAGCGCCAGAGTGCAACAGAAACAATGGGGACTGATCAAATTTTGTCAGACTGCCGGGCAGCTCAACAAGGAGTCAAGGACACATTCGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000700