BGIOSGA000709

From RiceWiki
Revision as of 10:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000709| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000709, complete gene.| tag = OsI_039...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000709

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000709, complete gene.

LocusTag

OsI_03969

Ensembl Transcript ID

BGIOSGA000709-TA

Ensembl Protein ID

BGIOSGA000709-PA

Length

4806

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36374026..36378831

Sequence Coding Region

36378677..36378831,36376715..36376825,36376538..36376643,36374955..36375158,36374780..36374866
,36374608..36374706,36374329..36374533,36374209..36374279,36374026..36374115

Genome Context

<gbrowseImage1> name=IndicaChromosome01:36374026..36378831 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:36374026..36378831 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCCAACGCTTCGGTGGACATTGACGATCAACATGTCTGCCTGAAGATCTCCAACCAGGAGTCCACCACGAGCATGTTTCGCTCGCACAAGCAGAGGCACCTCGTCCGGCTCACCGACGCCCAGCTAGCCCTGCGCCAAGATGCATCCACTTTTGGGGAAACAATAGGCTCTGCTCAAGATGTGAAGTTTGATGCAAAAACACTTACTCAGGCCCATCGTTATGTCTTACGACATCTTGATGAAATAGAGGATTTTCGTAGAGAATTTCTAGAGGAGGAGAAGAGAAAACAAAAGAAGTCAGTTTTCACTTCTTTTGAATCTGACAAGTTGATTAATGAGCGATTCCATGATTGGCTATACCACAAGAGAAAGTTTGCAATTGATGGGAGAGCTAAGAGTTGGCTTCTCCATCAGTTAGATGGTAAATGGAGGCAATACAAGGGAAAACTGAAAGGAAAATATTACAAGCCTAACTTACCTATGGAACGAGTATTGCAAACGGTGCCCAACACTGTTGATGAATCTCGATGGCCTACACTAGTTTCCTACTGGTACTCAAAGGACTCTAAGAAAATCAGTGACAGAAACCAAGAGAATGCACTCAAGCATCCACACACTTTAGGAAGAAAGAGTTTTACAAGAAAGAGAAAAGAACTGGAAGTTAATGGGGTGGAGGTGGACCGAGAAACCTTCTTTGATGAATGCCATAAGACAAAAGATGGTAGATATGTTACTGATGCTACTCAAGAAAAAATGAATGAGGTATACATGAAATTGGCTGAGAAAAGAGTAGATAGTCAACAACTCACTGAAGCTGATTTTGAACAAGCTATGTTAGATATGTTTGGAAAGGATCATAGTGGTAGAGTTAGAGGCATGGGTCCAACCATTACTCCTACAAACTATTATGGTGGAAGGTTTCTGAATATATCAGCAATCAATGAACAAGGAACCAGCTCCAAGAAATATCCCGAGGACAATTTGTTGGCTAGGCTGCCACCATCCCTTACTAGGCTCATCCCAACAAGTGAGGTTAATCAAAACCAAGAAGTTCAGGCACCAAATACTGCGCCATCTCCCAGTCAGAGAGCATCTTCTCAGCCTTCAACTGAAGAAGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MEANASVDIDDQHVCLKISNQESTTSMFRSHKQRHLVRLTDAQLALRQDASTFGETIGSAQDVKFDAKTLTQAHRYVLRHLDEIEDFRREFLEEEKRKQKKSVFTSFESDKLINERFHDWLYHKRKFAIDGRAKSWLLHQLDGKWRQYKGKLKGKYYKPNLPMERVLQTVPNTVDESRWPTLVSYWYSKDSKKISDRNQENALKHPHTLGRKSFTRKRKELEVNGVEVDRETFFDECHKTKDGRYVTDATQEKMNEVYMKLAEKRVDSQQLTEADFEQAMLDMFGKDHSGRVRGMGPTITPTNYYGGRFLNISAINEQGTSSKKYPEDNLLARLPPSLTRLIPTSEVNQNQEVQAPNTAPSPSQRASSQPSTEEE</aaseq>

Gene Sequence

<dnaseqindica>1..155#2007..2117#2189..2294#3674..3877#3966..4052#4126..4224#4299..4503#4553..4623#4717..4806#ATGGAGGCCAACGCTTCGGTGGACATTGACGATCAACATGTCTGCCTGAAGATCTCCAACCAGGAGTCCACCACGAGCATGTTTCGCTCGCACAAGCAGAGGCACCTCGTCCGGCTCACCGACGCCCAGCTAGCCCTGCGCCAAGATGCATCCACGTACATCTCGCACTCGCGTTGTTCTAGCTGAACTAAGTAGTGACGATGCCAGGCTCAGAGAACTATGGCGACGGGAGAAGTAGCGGCGACGCAGGAAAGAGCACGGCCAGCTAAATAACTACAAACTAAAGAAAGACAGGAAGTTTGATTTGAAGCATGGATGAGAAAAGAACGAGATGCTGGCTTAAATAGGGAAAGAAAGAGGTATTAAAGCGAGAAAAAAGTACTAATTAAGAAGCAGGAAACAGAAAATGTACCACGGTATGGCACAAGCGCAGCGGCATTCAGTGAGCCAAGTAGGGGGAAAAGCTAGCCTACGAGAAAACATGTGGCCATGCATGGTAGCACGCATAATACGCATGCAGGCACGAGGCAAGCACAAACAGCTAGCTGTGCGTTTGCTTACTACAGCAGCTAATTTTTCCAGGAAGCGGCATGCATTGGTGGAACCGGTTGAGCAAAAAAAAAAAAAAACGAGAGATCACCGGCACGTATACGCGGGGAGCATCGACCATCGCGCAGACACCGGATACGCCACCTGAATAAATATCCAACCGGTTACCCGACAAGAAGGAAATTAGAAAGAAAATCCATATAACACGCGGCAAGCAACGGAGTGAATAGAAAAAAATTCAAAAAATCAGAAAAATGGGAACCTGATCGGAGACTACTAGGTAAGTATGAGTTCCGTAATCAAACGCAACCATTTGATGGTACAGTGGAACATAGGACCGCCCCTCAAGCGCCCAGCAGTAGTTCAAACCTTACTAAGTTGGAAGGCAGAAATTTCACAATGAGAAAAATCAAATGATCAGCCAATCAAAGGTACTGACAAAAAGAAGAAAACTAAAAGAAAGAGGGGAAATGATGGTGAGAGTTCACAAACAAGTAGTTCTGGAGGAAATAGTCCCACGGATCCTATGGACTGGTGGAAGAAGAAAAGCATTTTCTTCAAATTGCAATATTGGGAGCACTTGTCTTTGCGCCATAATCTTGATGTAATGCATATAGAAAAAAATGTGTGTGATAACCTTGTTTGTACTCTGTTAAATGATGCCAAGTCAAAGGATAATCTCGAAGCACGTCTTGACTTGGTAGACCTAGGCATACATCAAGAACTTCATCCAAAACTGGAAGAAGATAGTCGTTATATAGTACCACTGGCTTGCTTCACAATGTCTAGAGAGAATAAGGAAACTTTATGTTCAGTTATTCAGAGCATCAAGTTGCCTTATGGCTATGCATCAAACATAGCAAGGTCTGTTGATATGAAAAGCTGCAAATTCATTGGTCTGAAAAGTCATGATTGCCATATTTTAATAGAGCACCTTCTACCGATTGCACTGTGAAATTGCTATCCTAACAAAGATATCATGTCAATTGTTGAGGAGCTATCCAATTTCTTCAAATCATTGTGCTCTAAGGTGCTAGACATATCTGAACTTGCCAGCCTTAAAGAACAAGTTCTGATGACACTGTAAAATGGAGAAGTTATTTATTCCTTCCTTTTTCACTATCATGGTTCATTTAATTGTGCACCTGGTTGATGAAGCTAAATTAGGAGGTCCTGTACACTATAGATGGATGTACCCTTTTGAGAGGTAATTAAATATGCTCATTCTATTTGTTCCATTAAAATTTACATATTCTATAGTAATTGATTTGATCATGATATCAAACTTCAGATATTTTGTTCGGTTGAAGAGCTATGTGCGTAATCGTGCACATCCCGAAGGGTCTATAGCAGAGCGGAAGAATGTTTAACATTCTGTGCAAGATTTCTCAAAGGGGTTGATAAATCTAGTCTTTCCATGCCCACAAATTCTGAACAAAAAAGTATTTGTTTGATAGTTTTGGGGAAACAATAGGCTCTGCTCAAGATGTGAAGTTTGATGCAAAAACACTTACTCAGGCCCATCGTTATGTCTTACGACATCTTGATGAAATAGAGGATTTTCGTAGGTATAGTACCTAACTGAACATTACCTTTAAAAAATAAAATTTATAAAATAATATAAATATGCTATTTGTAGAGAATTTCTAGAGGAGGAGAAGAGAAAACAAAAGAAGTCAGTTTTCACTTCTTTTGAATCTGACAAGTTGATTAATGAGCGATTCCATGATTGGCTATACCACAAGGTTAGTATAAGTTAGGCAAAACAAGTCAGATCATGCATGTACTTATGTTTTGTAAAATTAATATGCCTAATGTTTAAAACCCATGTTTTTATTGGTTATGCTTAATGCTTGTGGTCCTGATCCACGCATCACGGAAAATATCATAAAAATAGCTGAAAAACCGAGTAACTATGGAAGGAGATTTGGTAGATTCTTAATTAATGGGTTTAAATTCCATACTATTTCTCGTGAGAATAATCTGCAAACTTAAAACAGTGGTGTTGTTAATATATCTGAAGGTGATGCCATCAGCTATTATGGCCGTATTACAGACATTATAGAGCTGAACTATAATGGAGCATTTAAGGTCTTCTTATTTAAGTGTGATTGGTATGATGTGCACCATCGCGTGGGTACGAGGGAAGATGAGTTTGGTTTTACTCTTTTGAATTTTTCGTGGGGTATACACATTGGAAATAAGCTGATGGACGATCCATTTGTTTTCTCTTCACAAGTTGAACAAGTATTCTATGTCCAAGATTTGTTTGACATGGGAAAGGTTGGAGATGAAGATGATGAGATATGAGTTGTACATGATATATTTTGTTGCATTTATTTGCTGAAGGCATTAGAGTTTTAGTTATTTACATTCAAATATATTTTTAATGTATTTGTTTGTTCAATTGCTTGGTAATTTCTATAAGACACTTCCATTTAGTAACTGGAGATATGGAGATGTGTGATCTAGAGCTATGTGTGGTCTCATTTTGTCATTTTAACTGGTATGCAATGGTTGTCTTGTTACTTATATCTTTAAAATTCTAATCCATTTTTAAATATAGTGTGAATGGCTGCGAGGTCCCAGACACTACAGGGCTTGGATCTTTTGCAGAATGGAGTGCAAAATCAAGAAATAGATATACCAAGGAATGATCAGTATGTTGAAGAACAGAACATATCAAATGAGAATTGGTGCACAAACTGCCATAAGTATCGTAAGATATATTGTTTATTTTTCTGCAAAATTGTTTCTTATATACTAACTTTTAAAACTTTGTAGATCCTGATGGACGTATTAAAAGACGTCGGGGACCAACAAAATTGGCCAATGTTTAAAATCTTCCAGCTGGAGTTAAGATTATTGTCAAACTGGACCGTTTCAATGCACCTTGCTGACAATCTTCTGCAGTTCTTGGATCCTATTTAGGAACATTAGTCAGGAAGCCACATCTAGCTCCACTGAATATTCTAAAATGGAATGACAAAATTTTTATAAGAATATATCATCAAAAAATGATTACTGAAGTTAAGGTATTTATGTTTAGTTTACCATGTTTTTAAAATCATACTGTTATGGTGATCCCAGTATAATTCCATTGGCTCTTTTTTTTATGCACTAGAGAAAGTTTGCAATTGATGGGAGAGCTAAGAGTTGGCTTCTCCATCAGTTAGATGGTAAATGGAGGCAATACAAGGGAAAACTGAAAGGAAAATATTACAAGCCTAACTTACCTATGGAACGAGTATTGCAAACGGTGCCCAACACTGTTGATGAATCTCGATGGCCTACACTAGTTTCCTACTGGTACTCAAAGGACTCTAAGGTAAATATATGTTGGGACTTTTTAGTGAGTGGCTGTCATTTTGAATTATCTCAGCTCATTTAAATGATGATATATATTGTATTGTTAGAAAATCAGTGACAGAAACCAAGAGAATGCACTCAAGCATCCACACACTTTAGGAAGAAAGAGTTTTACAAGAAAGAGAAAAGAACTGGTAAGTCATTTAGCACTTTTATTTGTTAATTCATTCTTCTATTTCCTCATGCGTTTGAGATTTATAACTATAGGAAGTTAATGGGGTGGAGGTGGACCGAGAAACCTTCTTTGATGAATGCCATAAGACAAAAGATGGTAGATATGTTACTGATGCTACTCAAGAAAAAATGGTACTAACATATCTTTTTTTAACTGTTTGTACAACAAAATACACTATGCTAAGAGTATGATTTTTCCAATGTAGAATGAGGTATACATGAAATTGGCTGAGAAAAGAGTAGATAGTCAACAACTCACTGAAGCTGATTTTGAACAAGCTATGTTAGATATGTTTGGAAAGGATCATAGTGGTAGAGTTAGAGGCATGGGTCCAACCATTACTCCTACAAACTATTATGGTGGAAGGTTTCTGAATATATCAGCAATCAATGAACAAGGAACCAGCTCCAGTAATGTCAATGCTTTCATAAGTTAGTTTTATGGTCTCATATATGGCAGAGAAATATCCCGAGGACAATTTGTTGGCTAGGCTGCCACCATCCCTTACTAGGCTCATCCCAACAAGTGAGGTATGGGCCCAAGATTACTAGTTTTAAATGTAGCAACTTATATGGGCATATGCATAAGCTTGGAAAATAATGCATTCATGGATTCATTTTCAGGTTAATCAAAACCAAGAAGTTCAGGCACCAAATACTGCGCCATCTCCCAGTCAGAGAGCATCTTCTCAGCCTTCAACTGAAGAAGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000709