BGIOSGA000717

From RiceWiki
Revision as of 10:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000717| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000717, complete gene.| tag = OS01G07...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000717

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000717, complete gene.

LocusTag

OS01G0777800

Ensembl Transcript ID

BGIOSGA000717-TA

Ensembl Protein ID

BGIOSGA000717-PA

Length

3591

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36231922..36235512

Sequence Coding Region

36235308..36235512,36234359..36234514,36234015..36234173,36233047..36233205,36232833..36232964
,36232635..36232748,36232188..36232286,36231922..36232109

Genome Context

<gbrowseImage1> name=IndicaChromosome01:36231922..36235512 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:36231922..36235512 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGCGGTGTGGGCGTGGAGTTGGGGCGCGGGAACGGACGGGCAGCTCGGGAACGGCGGCTTCCAGGACCACCACCTCCCGCAGCCGCTCCTCCTGCCACCTCGCTGCCGCGGTCTGGTTTCCTTCGTCGCCGGCGGTGGCGCCCACGCTATCGCCCTCACAAGTGATGGTGAAGTATTTACTTGGGGAAGAGGTACACATGGTCAGCTTGGTCATGGGGACGTGGAGAACATCCCTCATCCAAAGCTTGTAAAGTTCTTTGAGAACTACATGATAACCTGTGTGTCTGCTGGATGGAACCATTCTGGATTTGCTACAGATTCTGGACAGCTTTTCATGTGTGGAGATGGTTCATTTGGACAGCTCGGTGCTGGTGATAACCACCCAAGAAACTTACCTTTTGAAGTGGCATACTTTACCACAAAGCATGTTGTGAGGCTTGCACTTGGGATGCGTCATTCTCTTGTCCTTTTGAAAGATAATTCTGTCTATGGATTTGGCTCAACAAGACGGGGACAAATTGGTAGATGCACTAGGAACCAAAAGTTCTATGATGTTCCAAGAATAATTGATGGTTTTCCAGACTGTAAGATAGGGAATATATATGCCAATGGAGATCACAGTGCTGCATTGGATGAATCTGGTCAGTTGTACATCTGGGGAAGAGCATTAATTGGTGAACATGATGATGATCAACCTCGGCCAGTCTTTCCTTCTTTGGGTATTTCTCAAGTGGCATTAGGATGGCATCATGCATTAGTTTTATCTGGTGAATTGTACACAATTGGCGCTTACCGTCATCGTAAGCTTGATCCCCATGTGTTGCCAAGTGCAGAGCCAGTGCAGAGACTAAATCCCGCCACAACAAGCCATAGTCATGATGAATCATCCTCATCATCAACACTGGTGAAGGTTCCCTGTGTTGATGGAGAACAGGTGGTGCACATAGCTGCTGGCACTGAACATTCTGCTTCGGTAACAGATAAAGGAACAGTCTTCACCTGGGGTTGGGGAGAGCATGGACAGCTTGGTTTGGGAGATACTTGTGATCAAGTGACTCCACAGAGAGTTAATATAGGTGATAAGAGGCCATGTTCTTCTGCTTCAGTTAACGTCTATTGTGGGAGTGGATTTACCATTGCGGTGAATTCTGGCTTAGAGTCTGATTAG</cdnaseq>

Protein Sequence

<aaseq>MEAAAAAAAEEEEEEAVWAWSWGAGTDGQLGNGGFQDHHLPQPLLLPPRCRGLVSFVAGGGAHAIALTSDGEVFTWGRGTHGQLGHGDVENIPHPKLVKFFENYMITCVSAGWNHSGFATDSGQLFMCGDGSFGQLGAGDNHPRNLPFEVAYFTTKHVVRLALGMRHSLVLLKDNSVYGFGSTRRGQIGRCTRNQKFYDVPRIIDGFPDCKIGNIYANGDHSAALDESGQLYIWGRALIGEHDDDQPRPVFPSLGISQVALGWHHALVLSGELYTIGAYRHRKLDPHVLPSAEPVQRLNPATTSHSHDESSSSSTLVKVPCVDGEQVVHIAAGTEHSASVTDKGTVFTWGWGEHGQLGLGDTCDQVTPQRVNIGDKRPCSSASVNVYCGSGFTIAVNSGLESD</aaseq>

Gene Sequence

<dnaseqindica>1..205#999..1154#1340..1498#2308..2466#2549..2680#2765..2878#3227..3325#3404..3591#ATGGAGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGCGGTGTGGGCGTGGAGTTGGGGCGCGGGAACGGACGGGCAGCTCGGGAACGGCGGCTTCCAGGACCACCACCTCCCGCAGCCGCTCCTCCTGCCACCTCGCTGCCGCGGTCTGGTTTCCTTCGTCGCCGGCGGTGGCGCCCACGCTATCGCCCTCACAAGTAAGCCCCGGTCCCGTTCAAAGCCGCCACATTTTTTTTTCTAGTAAACGATCGTTGTAGTAATGATTGGTTCTCGCATTTGCCGGAACTTGAACTCAGTTAGATACCTAGATTGACAATGGATTTGTGCACGGCGATGTAGTTTTGCTCACCATAGCAACAGATGTTCAGAGACTTCAGTTTGCACCAGTTCTAGTGTCTAGAATAATCACTTCCATCCAAACACCACTGAAGTGTTGCTGTGTTGGGCTTGATGATTAATCAGAACAGTTTTCTATTTCACAAATTTAAAACTTTTCGGTTTTCGCTAGTTCCTTTGTTCTGAATATTTGAACTTAGTGCCATTAAGTGGAGAGACATCTCTCTGTTGTATACTTGTATTCTAACAAGGGGCTGAGTGTTTTCCTTTTCAGTTCAAATTCCGCTTTCCAGTAATTAGTGATTGGATATGTTTCACAGATTTGTTCTATCCTTGGCCATTTTTTCAAAGCATTCTTGTTCCATTATCAAGATATATTGCTCGCTGAAGCTTGATCATTTACCAGGAAGAAAATTCTCTCATTGGCAACCTAAGCATTTTTGCCTTCTTTCCTCTTGGGTGTTTTGAGATGGGCTTGTAAATCTGAATCTTTTTGTGCCTATATTAGTGCAATGGCACGCAGAAATTTTGTATGTGCCCTAAATTGGCAACCTTGTCCCATTTCCGTCAGTCCTCAAGAATTTAGTCTCTGCATCAGATGCCTTCACGTGAGCAATATGCATCAGTTCTTTGAACAGCTACTCAACATTTCAGGTGATGGTGAAGTATTTACTTGGGGAAGAGGTACACATGGTCAGCTTGGTCATGGGGACGTGGAGAACATCCCTCATCCAAAGCTTGTAAAGTTCTTTGAGAACTACATGATAACCTGTGTGTCTGCTGGATGGAACCATTCTGGATTTGCTACAGGTGTCCAATTCTGAAACCACCTTATTTCCTTGTACTTTCTTTTGATCCTTTATGCTTTATGTTCAAAAAATCTACTTTATACTCTATATCACATATAGTCTGTGCATTTCAGGTGTTTATTTTGTTTCAAAAATAAAACCATTACTGATGAGCTTAGCTGTGATGTTTCTAGTTCTTATTTTCAGATTCTGGACAGCTTTTCATGTGTGGAGATGGTTCATTTGGACAGCTCGGTGCTGGTGATAACCACCCAAGAAACTTACCTTTTGAAGTGGCATACTTTACCACAAAGCATGTTGTGAGGCTTGCACTTGGGATGCGTCATTCTCTTGTCCTTTTGAAAGGTATGCAACATCATGTGTTGCGATGTTAGCTTAATTTTTAAGAAATTGCATAGTACATGAACCTACCCAGAATTACTCTGTTACCTCTTCTGAAACCACTTGCTCAGAAATCTTCCATTGTCTGGGCAATACCCAACTTTTAAATGACCCAATCATATTCCGTAATGCATTTTCTAAAGTTAAACAGCCTTTGAAAGAAACAATTAATCAATATTTTTTCTTTACAATTGAGGATAGGCATCGCTATAGCAGGGCAAGACCATACTGATAATTTTTATTGAAAGCGAAAATCAAGAACAAGATGACCTATACACAGTTATACACTTCTTTGAAGCCAAACATACCGGCAACTTAGGGTTGTTGATTCCTTGAAGAAGGGCTGAGTGAGCATTCTTTGATTTTTTTCCAACTATGGCAATATGGCATACAAAGCATTCATGTGGATGCAGAACCATCCCTTCTGCACTAGTGATTCGGGAGACGTGGGAGGGTCATCAATCCACAACCATATAATATTTCCTATCAGTCATCTGAGAATTTTAAGGCCACTGCTTTCTCTGATGATGTGGAATCTATGAAGGTGTACCTTTGAGCCATCCTTTAGCATTCTTTTCAGAGGGATGCTGCACCATCATTGTGTTCTAATGATGAATATGCATGAGATGTTGCAGGTTTTAGCTCATCAGTCATATATCTTTCCTATTGGACGTCCTGAGAATTATATGGACACCTCTTCTACTTGATGTATTGACAAACTAATTGTTATATATGTTACAAACGGATGACACTGCTAGTCCTTGTTCTTGCAGATAATTCTGTCTATGGATTTGGCTCAACAAGACGGGGACAAATTGGTAGATGCACTAGGAACCAAAAGTTCTATGATGTTCCAAGAATAATTGATGGTTTTCCAGACTGTAAGATAGGGAATATATATGCCAATGGAGATCACAGTGCTGCATTGGATGGTAAGCCTTGTAAATTTGTTGTGCAAACACTCTTCTTCTCTTTGGTACTTGGACATGATTGTACTTTCATTGCATGGAACAGAATCTGGTCAGTTGTACATCTGGGGAAGAGCATTAATTGGTGAACATGATGATGATCAACCTCGGCCAGTCTTTCCTTCTTTGGGTATTTCTCAAGTGGCATTAGGATGGCATCATGCATTAGTTTTATCTGGTATGTGGTGCGTTGTTCCTTTTCAATTGAAATATGTTTTCTGGAACTGCTGTCAAATGAGTAAGCATTCCGCAGTTACAGCAGGTGAATTGTACACAATTGGCGCTTACCGTCATCGTAAGCTTGATCCCCATGTGTTGCCAAGTGCAGAGCCAGTGCAGAGACTAAATCCCGCCACAACAAGCCATAGTCATGATGGTAGCCCCTTTTCAATTTTGGTTATATTATGTCACGTAGTTGTATTAAGTTTTTATTAGGAACCAGTAGCTGGACTGGAAAATATCTTTACATATAGATGAATACTCATTCTATGTGTTAGCCTAGTAATTATTGCCCAACCGTTGTGCTTTCTGTTAATTTCTTTTGTAATAACAATCTGCTTAGTTCATACAAGATTAGTTGAAATAAACTCATAGCATAGGGTAAATCGGACGTCGAACAATTTTTTTCTTCAATAAGAGGTTGGCATTCTTTTCTTTGCCATTTGATCTGCATGCTGCATTTTTTTCCCTATCACCATATAAAATTTGTCTTTGTGATTTGCAGAATCATCCTCATCATCAACACTGGTGAAGGTTCCCTGTGTTGATGGAGAACAGGTGGTGCACATAGCTGCTGGCACTGAACATTCTGCTTCGGTAACAGGTAAGTTACTCAAAGGCTGAAAATGAGCACATAATCCCTGGGTGGTACAAACTAATTGCTCTTGCATCTTTTTGTCAGATAAAGGAACAGTCTTCACCTGGGGTTGGGGAGAGCATGGACAGCTTGGTTTGGGAGATACTTGTGATCAAGTGACTCCACAGAGAGTTAATATAGGTGATAAGAGGCCATGTTCTTCTGCTTCAGTTAACGTCTATTGTGGGAGTGGATTTACCATTGCGGTGAATTCTGGCTTAGAGTCTGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000717