BGIOSGA000727

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Revision as of 10:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000727| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000727, complete gene.| tag = P0490D0...")
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Gene Name

BGIOSGA000727

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000727, complete gene.

LocusTag

P0490D09.28

Ensembl Transcript ID

BGIOSGA000727-TA

Ensembl Protein ID

BGIOSGA000727-PA

Length

5900

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36036512..36042411

Sequence Coding Region

36042225..36042411,36038267..36038490,36038108..36038166,36037733..36037963,36037507..36037636
,36037098..36037408,36036857..36036998,36036512..36036757

Genome Context

<gbrowseImage1> name=IndicaChromosome01:36036512..36042411 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:36036512..36042411 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGCCAGCTGCATCGTCGTCCTCCTCCTCCTCTCGCGACCGGCTGACGATCAGCCGGCCGACGGAGAAGGACGACGTCGTAGAAGAGAAGAGGGACGGCGGCGACGTGACGGCGGCCGTGCCGAGGCTGGCGGTGTACGGCGCCGGCCGCGTGCACGAGATCGAGCGGTTCTCGCACTACGTTGCTAAGCAGATAGGGATTGAGGATGTGAGCGAGTGCCCCCACCTTTGTGCACTAGCTTACGGTTATCTGAAGAAGACTGAGGGTTATGAACAAAACCTACTCGCGTTCTTCCATAACAAAATAAACTCGGACGCTCTTCTCGTGCTGTTGATTGAGGAGCTAGACAAATGTATACTCGGCTACTTCTCCTTCCATTGGAAATTTGCCACTGAAGTAATCACACAGGTTCTAACAGCAGAGCAGCCTAGAAGAAAGCTCAAAACCATGGTGTTAGAAGCCACTAGAAAGATGAGGTTTGAGAGGGTGTCAAGGAAGCTGAAGGTGACGAGGCTGTTCTCCACGCTGGTGGAGGAGCTGAAGGTCATCGGGGTCACCTGCAACGACGGCCAGCTGCGCGACGCCGACGCCGACGTGATGGTCCCGGCGGCTCACCGCGACCGCAGCCCGGTCCTGCTCCTGATGGGCGGTGGCATGGGCGCCGGCAAGAGCACCGTGCTCAAGCAGATCATGAAGGGGTTGTTCTGGTCCGGCGCGGCGGCGCACGCCGTGGTGGTGGAGGCGGACGCGTTCAAGGAGTCGGACGTCATCTACCAGGCCATCAGCTCGCGCGGCCACCACAACGACATGCTGCAGACAGCCGAGCTGGTGCACCAGTCGTCGATCGACGCGGCGGCGTCGCTGCTGGTGACGGCGCTGAACGAGGGGCGGGACGTGATCATGGACGGCACGCTGTCGTGGGAGCCGTTCGTGCTGCAGACGATCGACATGGCGCGGTCCGTGCACCGGCAGCGGTACCGGATGGGCGTGGGCTACAAGGTCGCCGCCGACGGCAACGCCACCGAGCAGTACTGGGAGCCCGTCGAGGGCGCCCCCGTGCCCAGCGGGAGGAGGCCCTACCGAATCGAGCTCGTCGGCATCATCTGCGACGCCTACCTCGCCGTCGTCAGGGGGATCAGGCGAGCCATCATATCGGGGCGAGCCGTGCGGGTGAGCTCGCAGCTCAAGTCGCACAAGCGGTTCGCCGGCTCGTTCCGCAAGTACTGCGACCTCGTCGACAGCGCCAGCCTCTACAGCACCAACACCATCGCTGGCGCGAAGTTGATCGGGTGGAAGGACGTGGGGAGCAGGCTGCTGGTGGACGTGGAGGAGATCGGGCTGCTGGACAGGGTGAGCAGGATCAACGAGGAGGCCAACGGCGTGCACGAGCTGTACCCGGACGGCCACCCGACGGACGGCGCCGGGTCGGTGTGGGAGGATCTGGTGTCGTCGCCGGCCAGGGCCGCGATACAGCGGGAGCTCAGGGAGGCCATCCTCGATAGCGAGGCCTGCTTCCCGTCGCCGTAG</cdnaseq>

Protein Sequence

<aaseq>MRPAASSSSSSSRDRLTISRPTEKDDVVEEKRDGGDVTAAVPRLAVYGAGRVHEIERFSHYVAKQIGIEDVSECPHLCALAYGYLKKTEGYEQNLLAFFHNKINSDALLVLLIEELDKCILGYFSFHWKFATEVITQVLTAEQPRRKLKTMVLEATRKMRFERVSRKLKVTRLFSTLVEELKVIGVTCNDGQLRDADADVMVPAAHRDRSPVLLLMGGGMGAGKSTVLKQIMKGLFWSGAAAHAVVVEADAFKESDVIYQAISSRGHHNDMLQTAELVHQSSIDAAASLLVTALNEGRDVIMDGTLSWEPFVLQTIDMARSVHRQRYRMGVGYKVAADGNATEQYWEPVEGAPVPSGRRPYRIELVGIICDAYLAVVRGIRRAIISGRAVRVSSQLKSHKRFAGSFRKYCDLVDSASLYSTNTIAGAKLIGWKDVGSRLLVDVEEIGLLDRVSRINEEANGVHELYPDGHPTDGAGSVWEDLVSSPARAAIQRELREAILDSEACFPSP</aaseq>

Gene Sequence

<dnaseqindica>1..187#3922..4145#4246..4304#4449..4679#4776..4905#5004..5314#5414..5555#5655..5900#ATGCGGCCAGCTGCATCGTCGTCCTCCTCCTCCTCTCGCGACCGGCTGACGATCAGCCGGCCGACGGAGAAGGACGACGTCGTAGAAGAGAAGAGGGACGGCGGCGACGTGACGGCGGCCGTGCCGAGGCTGGCGGTGTACGGCGCCGGCCGCGTGCACGAGATCGAGCGGTTCTCGCACTACGTTGGTACGTACGTACGGTTTCTCTCCATCGATCACCTAATTAATTTACGTTACTTTGTTTTTGTTTGAAGCCAAACCTTAAACGTACGTTGCTCTTCTCACGTTGTTAGCCAGCTAGCGCGTCGCGTCGTTTCTGAATTCTTAAATTCCATGAGACGTGTGCTCCGATAGTCCGATTCTTATAATGATTTTCATTGGGATCAGTTTTACATTCGTAAGAGCAAGTTTAATAGTATAACTCATTACTAGCTCCAAATCATATATAGAAAATGCAATAGCCAATTCATACAATAGCGCTTACTATACTATTAATATCCGATCTCACTTGTCATACATACATTACGTCTTGAAACCGTGCTGCAGCTGGCTACATATCTATAGCCTGCTGTTTTTCTCTCTCTTTCTTTATCTCTTTAAAATATGTTTATAGTTGACTTATAGCCTGCTATTATACCTGCTCTAACACATGAGGCAAAGAAGCAAAGCTAGTGGAGAAAAAAAAAGGGGGAAACTTGAATGCAGGTAAAGCGACTTTGGAGCCAGTCCATGGACGCATCCTCTGTATCGGATTCGATGCACAGAGTTTTGCATCTGAACATTTTGGTTAAGCTAGCTGTAGTGTAAAAAGTTCACATGGACCAAAACATTTTATTCTCAACACTTCACAAATGCAATTGAAATGACTCCGGCTCGGACGCTTGACGGAGGGTTTTTAAAATCGGGAGCTGATTTCAGCATGACATCAGCGTCACGTATCCTTGCAAAACCACTTTAAATTGATTTTTCTCTTAAATTACTTACCCAAATTATGATCCGATCGCACCATTAAATTTATTACAATTAAATTTTCAAAACAAGACCACACATGGATATATTCCAACAAAAAAATAGCTTATTATTGAATTATTTTTAAATGTTGCACGATGTTCCACCAGATATATCGGAATTGTTTCACTAAGTAGATCGAAAATGTTTCACTCGTTTAAATCGGGTGTTGTTTCACCTTATATAAAAACAATGTTTCAGCAAATAGCGAAAGAATGTTTCAGTTCACTATAACGTTAGATCTATGCATAGTGAAACATTATGAGTACACTAGGTGAAATATTTTTTGTGGAACAAAAAATGAAACGAATTCCCTTAATAGAGGGTTTCCAAAATATGTAGGTGATTTGTTGCAATAGAGTATTTCAGTTCACTGCAATATTAGATCTATATATAGTGAAACATTGTGAGTGCACTAGATGAAACATTTTTTTGGAAAAAAAATAAACCAAATTCCCTTAATAGAGGGTTTCTAAAATATGTGGGTAATTAATTTGTTACAATGGAGTATATATTGCAAATAAGTGGCAGGTGAGAGCAGAGACGTGGTGAGGCTCAGGGACAGAGAGCGCGCGTCGTGGAGGAGGGAGCGCCCGATATTTCTCCCTCCCCCGAGCGACAGATCCGGGGCATTCCCCAAATGCAATAGCCGTTTTTTACGATCATCTGTAATAGTATATCGTACAGTTTTCAACTGTATGTGTTCAGGTGTTCGATTACATCAGTGTTTTTGTCAAAGCTAATTCACCTTGCTGTTCATATCTATCCGTCCATTATAAAAGATTTGAAAATATTTAACAAGATATAAATATGCGATATATCGCTTCACAAACATGTAAGTCAAACCAAAATACCCAATAAGCATAAGCATTAGCTCTCCCTGAAAAGGAGGTGATCTAGCCGCACCTTCCAGTATGGCTACCTTGTTACGACTTCACTCCAGTCGCAAGCCTAGCCTTAGGCATCCCCTCCTTACGGCAGTTTATTGGCTCGTTCATTCACTCGCTGGGTAAGGAGGCAATGACTTACAAGATGTCGAAGGGAAAGTAGAACTTCTTCGGTGCTTGCCGCTACTGCCGCAAATCAACTCAAGCTCCTCGTTCCATCATGAAAGAGTAAAGCCCCAAAATAGGTACACAGCGTTTGCTATTGCAATAAGGGCTGCTCGCCTTTCCTTTTGACGGCTTGGCTTACTATCGCTCCTATGTAGTGGTCGGCCTTAAAAGTATCTTTGGACGAGGTCCTACGGTAGGTAAGAGCACGCACAAGCACTTGACCGAAGGGGACCAACGCTTCTACTCCTCCACCAAGGAGCTTTTTTTAAGAATACTGAGTCGGGTTCTTCTCCTACCAGTATCGAATAGAACATGTTGAACAAGATCTTCTTCATGGAAACCTGCTCAATTTAGATCGGTAAAATCGTACAGATTTTGAAAAGAACCCCCAGGGGGTAGTGAAATAGAACGTGAAACAGTGCTGAGCTCCCAAGCAGTGGGAGGGGAAAGTGATCTCTGACCGCGTGTTTGTTGAAGAATGAGCCGTTTCATTCTTGCGAACGTACTCCCCAAGCGAGATACTTAACGCGTTAGCTACAACACTGCACGGGTCGAGTCGCACAACACCCAGTATCCATCGTTTACGGCTAGGACTACTGGGGTCCTGTCCAAGCCAAAGAACTTACCCCTGAAAAGTCCTGACAAATGATGATTGAGACGAGATTCCGCGTTTTTGAACCACGAAAGGCCAACTTTCATAATTAAACGCTGTCACTGTATGGATAACTCTTATTGTGAAAAGAGCTATTTACTCTATAATAGATAGGTAGAGCCAAAGAATGTGAACCCTTTGGAAGGCTGTGGGCGATGAGGGATTCGAACCCCCGACACCGTGGTTCGTAGCCACGTTTCGACTGTATATAAATTGCAATTAAATTTATAGAATTAAAAGTTAAGAGTTGACAAGATAGATTAAATATAATTATATTTATGGAATCAAAAGTTAAATAGTGTTGTACAATAAGTCCAATTAGCATTTCCAGCAACAGCCCCTAGCCCCCTATTGTAAAGCCTCTAAAGGTCTAATGGGGGTTGCCCCCATCTTCAACTACAAACCCCATTTCTTAGGCTCCATCTCTCTCTCTGTGTGTGTGTTTTAGTACGCACATTATATTTATGTCTATGTCTAGTTTAACACCAGAATAGTTCAAACACGTAGAATTCAACCGTATTCAAATTTATAATTTTGAATACCATAATTCAAATTTAAATTCAAAATTTTCAACATTGCAAAATGCATAATAAAATTCAATTTTCACAATCACACACGTATGCAAGTTCACAAGAATTATATGATTTTTTTAAAATAACATATACTACAAACATGAATGGTTCAATCCGGACAACCGACTACTAGCACAAGACATTGCTAGAGTTGCTACGCATGAGGTCAACGACCTGCGACGTGTCAGTGTGGAGATCACGTAGGTTGACGAACGACATCGGACAGGGCAACGTTGGACTATCCTAGCAAGATGGTGGTCAGACAATAGCCGGTGGCACGACAAAAGAAAAGAGGGTAGCAACACAGTGAGAGCGCGAGAACAATGGGAGAAGCGCGCGCTAGGGAATTTTCACACGCACCAAAAAGAAAAAGAGATGGGGTTGGGTGTAGAGCCTCTAGGATTGAGGGCTATGGACAGAGATTTCGGTGCCTTTCTATTTTAGGAGCTTTAATAGCGGTCCTGCCGTCCTGCTGGATCTCAATTTTTCTCCTTTCACCCCAAAAACTATTTAGGGGTTTAATTAGTTTAGGGGCTCTGCTGGAGATACTGTCTAGTCCGTGTAAATTTGCACGGCATAATCTGCTAGTTGTTCATTATCCTAAATATCAATCAAATGATATATTTTTTTTCAGCTAAGCAGATAGGGATTGAGGATGTGAGCGAGTGCCCCCACCTTTGTGCACTAGCTTACGGTTATCTGAAGAAGACTGAGGGTTATGAACAAAACCTACTCGCGTTCTTCCATAACAAAATAAACTCGGACGCTCTTCTCGTGCTGTTGATTGAGGAGCTAGACAAATGTATACTCGGCTACTTCTCCTTCCATTGGAAATTTGCCACTGAAGTAATCACACAGGTAGGAAAGATTTACACATCCCGTGTTCTGCATTACCAATCAACTGTTAGTCCTTGAGATACTCTAAACACTGAAATGTTGGAGCCACTTAATTTCTTAGGTTCTAACAGCAGAGCAGCCTAGAAGAAAGCTCAAAACCATGGTGTTAGAAGCCACTAGGTAAATAATCATGCTTTATTAATCTGGAATATTTTTTGTAAGAATTAACCAGGATTGATTCTATTGATTTTGGTACAATTATGATCAAGAAAGAATGAAATCTGGTTCTTAATTGTTTTGTTTCTTCCTTTTTTGGACAAAAAGAAAGATGAGGTTTGAGAGGGTGTCAAGGAAGCTGAAGGTGACGAGGCTGTTCTCCACGCTGGTGGAGGAGCTGAAGGTCATCGGGGTCACCTGCAACGACGGCCAGCTGCGCGACGCCGACGCCGACGTGATGGTCCCGGCGGCTCACCGCGACCGCAGCCCGGTCCTGCTCCTGATGGGCGGTGGCATGGGCGCCGGCAAGAGCACCGTGCTCAAGCAGATCATGAAGGGGTCAGTCCGTTCGTCCACTTCGATCACGGACTCGAGCAGGCACGCGTGACGCGGCGATTGAGCTGACCACCACCGTGGCGTACGTGCAAAATGCAGGTTGTTCTGGTCCGGCGCGGCGGCGCACGCCGTGGTGGTGGAGGCGGACGCGTTCAAGGAGTCGGACGTCATCTACCAGGCCATCAGCTCGCGCGGCCACCACAACGACATGCTGCAGACAGCCGAGCTGGTATACGTACCACGCTTGCCCTGAACCTGCTCAATCGTCAGCCGGCTCGGTCTGTGTGGGTCTGGATGTGTCTGACACGTACGGTGTCGCGTGCGCAGGTGCACCAGTCGTCGATCGACGCGGCGGCGTCGCTGCTGGTGACGGCGCTGAACGAGGGGCGGGACGTGATCATGGACGGCACGCTGTCGTGGGAGCCGTTCGTGCTGCAGACGATCGACATGGCGCGGTCCGTGCACCGGCAGCGGTACCGGATGGGCGTGGGCTACAAGGTCGCCGCCGACGGCAACGCCACCGAGCAGTACTGGGAGCCCGTCGAGGGCGCCCCCGTGCCCAGCGGGAGGAGGCCCTACCGAATCGAGCTCGTCGGCATCATCTGCGACGCCTACCTCGCCGTCGTCAGGGGGATCAGGTAATTAACCAACCAACTACAATTAACGTGTTCACGCGCCTGATCGAGCCTAGCTGACACGACACGATCGATCGATCGATCGATCTACCCGTGCGTTAGGCGAGCCATCATATCGGGGCGAGCCGTGCGGGTGAGCTCGCAGCTCAAGTCGCACAAGCGGTTCGCCGGCTCGTTCCGCAAGTACTGCGACCTCGTCGACAGCGCCAGCCTCTACAGCACCAACACCATCGCTGGCGCGAAGGTATTATTCCTAACCCGTTCACCGATCGATTCCCCGTGTGATGATACCGTGCTGTGTGTTTGAGACGTTGTACGCGTGCGTATATATGTGCGCGTGCAGTTGATCGGGTGGAAGGACGTGGGGAGCAGGCTGCTGGTGGACGTGGAGGAGATCGGGCTGCTGGACAGGGTGAGCAGGATCAACGAGGAGGCCAACGGCGTGCACGAGCTGTACCCGGACGGCCACCCGACGGACGGCGCCGGGTCGGTGTGGGAGGATCTGGTGTCGTCGCCGGCCAGGGCCGCGATACAGCGGGAGCTCAGGGAGGCCATCCTCGATAGCGAGGCCTGCTTCCCGTCGCCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000727