BGIOSGA000750

From RiceWiki
Revision as of 10:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000750| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000750, complete gene.| tag = OsI_038...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000750

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000750, complete gene.

LocusTag

OsI_03875

Ensembl Transcript ID

BGIOSGA000750-TA

Ensembl Protein ID

BGIOSGA000750-PA

Length

3044

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35659772..35662815

Sequence Coding Region

35662149..35662815,35661870..35662003,35661669..35661781,35661458..35661581,35661086..35661235
,35660774..35660926,35660425..35660504,35660263..35660312,35659772..35659950

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35659772..35662815 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35659772..35662815 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGTCCGCTCCCTCTCCTCCTCCTAATCCTCGCCGCCGCCGCGTCGGCCCTGGCGAGGGCGCCGCCCCGCTTCCCGGTGCCGCACGCGCGGCCGCGGCGTGGGGTGGTGGGGGCCGAGGAAGCGGTGAGAGGGTACGACTACGAGACGCGCTACTTCCGGCAGCGGCTGGACCACTTCAGCTTCCTGGAGGAGGAGGGGGAGGAGGGGGATGGGTTCTTCCAGCAGCGGTACCTGGTCGGCCGCGGCGGCGGGTGGGCCGGCGCCGGCGGGCCCATCTTCTTCTACTGCGGCAACGAGGGGGACATCGCCTGGTTCGCCGCCAACTCGGGCCTCGTGTGGGAGGCCGCCACGCGCTTCGCCGCTCTCGTCGTCTTCGCCGAGGCAAATTTATCCTCTCACCTTGCACCAGTCAGTGTGTTCTTCCTTGGGTGTGCGCTGATCGTGCGAGATCCGATCCCGTTTACTTGTTCTCTGCAGCATCGGTACTACGGGGAGTCGATGCCATTCGGCAGCAAGGATAAAGCTTACAACAATTCCAAGTCCTTGGCGTATCTCACAGCCGAGCAAGCGCTTGCTGATTATGCTGTACTGCTCACTGACCTCAAGAAGAACTTGTCATCAGAAGGCAGCCCTGTCGTGCTCTTCGGGGGCTCATACGGTGGAATGCTCGCTGCTTGGATGAGACTTAAATACCCACATATTGCTGTTGGGGCGCTCGCGTCATCAGCTCCAATCCTTCAATTTGAAGACGTTGTCCCTTCTACCATATTCTACGATCTCGTGTCAAATGATTTCAAGAGGGAAAGTTTAATCTGCTTTCAAACAATAAAGGACTCTTGGAAAGCACTGGATGCTCAAGGAAATGGGCAAGATGGTCTGCTGAAACTAAGCAAAACTTTCCATCTATGCAAGACTATAAAAAACACTGGGGAACTTTCAGATTGGTTGAGCTCAGCGTACAGTTACCTGGCCATGGTGGATTACCCAATGCCAGCAGATTTTATGATGCCTTTGCCTGGCAATCCAATAAAGGAATTGTGTACAAAAATTGACAATCAACCTGATGGAACCAGTATTCTGGAGCGCATATATGCAGGAGTAAATGTATACTACAACTACACTGGTACTGTTGACTGCTTTGATCTAAATGATGATCCGCATGGAATGGATGGATGGGACTGGCAGGCTTGTACCGAGATGGTTATGCCAATGTCATACAGTGAAGATAGTATGTTTCCAGCAGATAAATTCAACTACACTTCATATGAGAAGGATTGCATCAACAGCTTTGGTGTTGAACCAAGGCCTCAATGGATTACTACAGAGTTTGGTGGGCATAATATTAGTCTAGTTCTGGAGAGATTTGGTAGTAATATCATATTCTTCAATGGGCTTCTGGATCCTTGGAGTGGCGGAGGTGTCCTGAAGAATATATCTGAGAGTGTTGTGGCCATCATCGCTCCATTAGGAGCTCATCACATCGATCTGCGCCCCGCGAGCAAGGACGACCCGGATTGGCTTGTTAGGCTGAGAGAATCAGAACTGGGCATCATATCGGGCTGGCTCTCGGATTACTACGGTGCAAGAAGAGGGGCGCTCCTCCAGCGCGCCGCTCCCATCCCATGGACTCTTCTGCACCATTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MRPLPLLLLILAAAASALARAPPRFPVPHARPRRGVVGAEEAVRGYDYETRYFRQRLDHFSFLEEEGEEGDGFFQQRYLVGRGGGWAGAGGPIFFYCGNEGDIAWFAANSGLVWEAATRFAALVVFAEANLSSHLAPVSVFFLGCALIVRDPIPFTCSLQHRYYGESMPFGSKDKAYNNSKSLAYLTAEQALADYAVLLTDLKKNLSSEGSPVVLFGGSYGGMLAAWMRLKYPHIAVGALASSAPILQFEDVVPSTIFYDLVSNDFKRESLICFQTIKDSWKALDAQGNGQDGLLKLSKTFHLCKTIKNTGELSDWLSSAYSYLAMVDYPMPADFMMPLPGNPIKELCTKIDNQPDGTSILERIYAGVNVYYNYTGTVDCFDLNDDPHGMDGWDWQACTEMVMPMSYSEDSMFPADKFNYTSYEKDCINSFGVEPRPQWITTEFGGHNISLVLERFGSNIIFFNGLLDPWSGGGVLKNISESVVAIIAPLGAHHIDLRPASKDDPDWLVRLRESELGIISGWLSDYYGARRGALLQRAAPIPWTLLHHS</aaseq>

Gene Sequence

<dnaseqindica>1..667#813..946#1035..1147#1235..1358#1581..1730#1890..2042#2312..2391#2504..2553#2866..3044#ATGCGTCCGCTCCCTCTCCTCCTCCTAATCCTCGCCGCCGCCGCGTCGGCCCTGGCGAGGGCGCCGCCCCGCTTCCCGGTGCCGCACGCGCGGCCGCGGCGTGGGGTGGTGGGGGCCGAGGAAGCGGTGAGAGGGTACGACTACGAGACGCGCTACTTCCGGCAGCGGCTGGACCACTTCAGCTTCCTGGAGGAGGAGGGGGAGGAGGGGGATGGGTTCTTCCAGCAGCGGTACCTGGTCGGCCGCGGCGGCGGGTGGGCCGGCGCCGGCGGGCCCATCTTCTTCTACTGCGGCAACGAGGGGGACATCGCCTGGTTCGCCGCCAACTCGGGCCTCGTGTGGGAGGCCGCCACGCGCTTCGCCGCTCTCGTCGTCTTCGCCGAGGCAAATTTATCCTCTCACCTTGCACCAGTCAGTGTGTTCTTCCTTGGGTGTGCGCTGATCGTGCGAGATCCGATCCCGTTTACTTGTTCTCTGCAGCATCGGTACTACGGGGAGTCGATGCCATTCGGCAGCAAGGATAAAGCTTACAACAATTCCAAGTCCTTGGCGTATCTCACAGCCGAGCAAGCGCTTGCTGATTATGCTGTACTGCTCACTGACCTCAAGAAGAACTTGTCATCAGAAGGCAGCCCTGTCGTGCTCTTCGGGGGCTCATACGGTGGAAGTAAGGCTTCTCTTTAACTGGATAGCCTTGCCTGTGCAAAATCTGTATTCCGTAGGGTCTTCTTGAATGTGGTTTGGTGGTCTGTTGGGCTCCAGCTTCAATCTGTATTTCTGTACTGACACCATTGAATGTATGATTGCTGCAGTGCTCGCTGCTTGGATGAGACTTAAATACCCACATATTGCTGTTGGGGCGCTCGCGTCATCAGCTCCAATCCTTCAATTTGAAGACGTTGTCCCTTCTACCATATTCTACGATCTCGTGTCAAATGATTTCAAGGTGTTTATTTTGCAACATTTCCTGTTTCCTTATTATTCTCAATATACGTGAGTGACATGACAGATGACACTTATTCACTGTGTTTTAGAGGGAAAGTTTAATCTGCTTTCAAACAATAAAGGACTCTTGGAAAGCACTGGATGCTCAAGGAAATGGGCAAGATGGTCTGCTGAAACTAAGCAAAACTTTCCATCTATGCAAGTGAGTAATTTTTTTCTATTCACTACATCTTTTTTACATTGAGCTTTACTAATCGGTAATCATATATGTATAAAAAATGTTTTGCAGGACTATAAAAAACACTGGGGAACTTTCAGATTGGTTGAGCTCAGCGTACAGTTACCTGGCCATGGTGGATTACCCAATGCCAGCAGATTTTATGATGCCTTTGCCTGGCAATCCAATAAAGGAAGTTAGTTCCTTTTTGTGATAAAATTTAATTTGCTAACATTCATCAACCATTATTTAGTTTGTGTTCTCAAGACCCAACAAAGAAGATAATCTAGAGTATCACTATATCAGAATGATAATTTAGTGTGCTGCAACATTCTGAAGCCTTACCTGCTTACCATGTTCTATTTTCTGCATGTCATCACTACTCCCTACTTACTAGGTTATCTGGTTTCTCTTTCAGTTGTGTACAAAAATTGACAATCAACCTGATGGAACCAGTATTCTGGAGCGCATATATGCAGGAGTAAATGTATACTACAACTACACTGGTACTGTTGACTGCTTTGATCTAAATGATGATCCGCATGGAATGGATGGATGGGACTGGCAGGTCTTGCAACTAAAACTTTATGCTGTTTCTATCCATTGGATATATTTGATACTCCCTCTAAATGGGCAAAAAAACATTTATATTTTAGGACAGAGGGAGTATATGTTAAGGTACTTGAGTTATCTGATATGACGTATCTGCCACTATTGCTTAAAACAGGCTTGTACCGAGATGGTTATGCCAATGTCATACAGTGAAGATAGTATGTTTCCAGCAGATAAATTCAACTACACTTCATATGAGAAGGATTGCATCAACAGCTTTGGTGTTGAACCAAGGCCTCAATGGATTACTACAGAGTTTGGTGGGCATGTGAGTTATAGTATCAAAATCTCAAGGTTTTCATAAAGCATATACATTTGTTTTTAACGACTTGCTCTGCTAGATGATTTGTCATCGATAGGAAACTTTCTTAACTAAGAAAAAAATGTATTATTATTAGATATGTTATGGAATGCTCAAATTCTGTTCTACTCCATAAACTATTCTGCTTGCAATACAACTGATTCTTCATATTTTTTTCAGCCAAAATATACATGTGAGAGAGTTTAATGACTTCTTGTTTTTTTTTTCTTGTTCAGAATATTAGTCTAGTTCTGGAGAGATTTGGTAGTAATATCATATTCTTCAATGGGCTTCTGGATCCTTGGAGTGGCGGAGGGTAAACAAATTTCACTTGCCTTTTGAGCTTTATTTCCTCTGATGACGATCTCACCTACACGAGCCATTTTCCTGTTATGATCTTGCCGTTATCTGAACAATGAACATTACAGTGTCCTGAAGAATATATCTGAGAGTGTTGTGGCCATCATCGCTCCATTAGGTATGTTGTTTTCCTACACTTCCATTCATCAATGGTGGTGTTAATCTGTAATAGACTCAAGTGTGTGAGATACTGGGATATAATGGAATCAATAATATACTTGAGTATACTACTCCCTCCGTTTCACAATGTAAGTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGCGAAACGGAAGAAGTACTTGACTAAATCACGTTGATGTGGTGCAGTTTGTAAGCAAGCACATTGAGTCTCTGGTTTGCATCATCTTGAGTTATTGAATCGTAAATCCGCTTTGTGATTTGCCTTTGCAGGAGCTCATCACATCGATCTGCGCCCCGCGAGCAAGGACGACCCGGATTGGCTTGTTAGGCTGAGAGAATCAGAACTGGGCATCATATCGGGCTGGCTCTCGGATTACTACGGTGCAAGAAGAGGGGCGCTCCTCCAGCGCGCCGCTCCCATCCCATGGACTCTTCTGCACCATTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000750