BGIOSGA000760

From RiceWiki
Revision as of 10:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000760| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000760, complete gene.| tag = P0403C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000760

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000760, complete gene.

LocusTag

P0403C05.21-1

Ensembl Transcript ID

BGIOSGA000760-TA

Ensembl Protein ID

BGIOSGA000760-PA

Length

6158

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35540257..35546414

Sequence Coding Region

35544979..35546414,35543435..35543529,35543257..35543330,35542915..35543152,35542642..35542832
,35542183..35542418,35541371..35541614,35541178..35541285,35540257..35540385

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35540257..35546414 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35540257..35546414 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCGGCGGCCTCCCGCCGCCTCTCCGCCCGTCCACCGCGCCGCCGCCGCCCTCCGTCACGCGCGCGCTGCACGCGATCAACACCTGCACCACCGCCGCCGCGCTCGCGCCCATCCGCGGCGCCATCCTCGGGGACCGCGCGCTCCTCCGCTCCACCGCCGTCGTCTCCGCCTTCTTCCTCGCCTGCGGCCGTCTCCGCCACCTCGACCCGGCGCTCTCCCTCTTCGCCTGCCACCCGCGCCCCCACGTGTTCGTCTTCAACTCGCTCCTCCGCTCCCTCGGCCGCGCCCCCGCCCGCTCCCCGCTCCCGCTCTTCCGCCACTTCCTCCGATGCCGCGGCGTCCGCCCCAACCGCTTCACCTTCCCTCTCCTGCTCACCTCCCTGTCCTCCCTCGCCGACCTGAGGGCCGTGCATTGCCAGGTGGTCAAGTCCGGGTTCGGGCCCGACCTCCACGTCCGCAACGCCCTCCTCGCGCGCTACGCGGACTGCGACCCTGACCTGGCGCACGCCGAGCAGATGTTCGACGAAATGCCCCGACCGGAGGTTGTCGCGTGGACCACTATGATCACCTCATACAGGAACCGAGGCCGCACCTTTCACGCTCTGGCGACCTTCCGGCGGATGCTTGCTGCTCATGTTGCACCCAACCGCGTTACCATGGTTGCTGCTCTTGGCGCTTGCGCGGCCCATTGTGCGGTCGACACTGGCATCTGGATTCACGAGTACGTGCAGAAGCAGGGATGGGAGATGGATGTTGTACTGGGCACAGCGCTGGTAGACATGTATGGGAAGTGTGGAAAAGTCTCAGATGGAATGCATGTGTTCTCAAAGATGGCCAAGAGGAATGTCTATACTTGGAACTCTATCATTGGAGCACTTGCTCTTGCACAGGATGGCAAGACGGCATTGCAGTGGTTCTCTCGGATGCAGAATGATGGTGTCCAGCCAGATGAAGTCACACTTATTTGTGTTCTTTGTGCCTGTGCACATGCCGGGTTTGTTGACATTGGGAGGAAAATATTTAACCTGGCCATACAAGGTGAGTATGGGTTTCAACCTGGGATCAAGCACTTTGGGTGCATGGTTGACCTTCTTAGTCGCTCTGGACACCTCGATGATGCCTTTAGGGTTGTTGAGACAATGCCATCACAGCCAAATGCAGTGATATGGGGCTTGCTATTAAGAGGCTGCAGGGCCCGTGGCGACTCATGGTTGAGTGAGCATGTGACAATGAGGCTGGTGGAGTTGGAACCTGAGAATGCATCGCATTATGTTCTGTTATCAAATTTGTATGCTGAGACAGGGAGGTGGCAGGAAGCTCAGGGGATCTTGCATTGGATGAAGAAGAAGGGACTGAGGAAAGATGCAGGCTGGAGCCTTCGAATGTTAGAGGACAAGTCAAAGAAGTATACTACTGATGGATGTTTGTTGGAAAGCATGAGCTTCCGGAAGGATGAACCTCTGATCCCTTCCCTCCCTGCAACAGAACATGGCTCCTCCAACACCAAGATTGGTAGTTCCTATAGATATGGTCGATGGACTGGAGGAAGAGTCAGTGATGATAACTCCGCAGATGACATCAAATTCCTGGATCTCACAATTACTCATTATCTGAGTGGGCCCTTAAGAATAGTTGATGCTGAAGGGGTTCCAGCTGCACCTGGTGATCTTCTTGCTGTAGAGATCTGCAACCTTGGTCCACTTCCCGGTGACGAATGGGGATATACTGCCATATTTGAAAGGGAGAATGGTGGTGGATTCTTAACCGACCACTTCCCTAGTGCAAGAAAGGCGATTTGGTATTTTGAAGGAATTTATGCATACTCCCCTCAAATACCAGGTGTCCGATTTCCAGGATTAACTCATCCTGGTATAGTGGGGACTGCACCATCTGCTGAGCTTCTCAATATATGGAATGAGAGGGAAAAAATATTGGCTGAGACAAATCATGAGTCAATCAAAATCTGTGAAGTTCTACATCAGAGGCCTCTTGCCAACTTACCAACCCCTGAGAACTGTTTACTTGGAAAGATTCAAGAAGGGACTGCTGATTGGCAGAAAATCGCAAATGAAGCAGCAAGAACTATTCCTGGAAGGGAGAATGGAGGGAATTGTGACATCAAGAATCTAAGTAGAGGTTCCAAGGTTTATCTCCCGGTATTTGTTGATGGAGCAAATCTGAGTACTGGTGACATGCATTTTTCCCAGGGTGACGGCGAAGTCTCATTCTGTGGAGCAATAGAAATGAGTGGATTTCTTGAGCTCAAGTGTGAGATCATAAGAGGTGGGATGAAGGAATACTTGACTCCAATAGGTCCAACACCACTTCATGTGAATCCTATCTTTGATATAGGTCCAGTGGAACCACGTTTCTCAGACTGGTTAGTCTTTGAGGGCATCAGTGTAGACGAGTCTGGGAAGCAGCATTTTCTTGATGCATCAGTTGCCTACAAGCGTGCTGTCCTCAATGCCATTGAGTACCTTTCCAGATTTGGGTACTCCAAGGAGCAGGTATACCTTTTGCTATCATGCTGCCCATGTGAGGGTAGGATATCTGGAATAGTAGACTCCCCTAATGCAGTGGCAACTCTTGCCATCCCTACAGCAATATTTGACCAGGATGTAAAACCAAAACGCCTGAGTGGGAAACAAGGACCAAAGTTGAGAAGGCTTCCAGATGTTTTGAGATGCTCGTCCGATGGACACCTTCCTGTTACACAGGACCCAAGCGGTACAAACGCACCTTAA</cdnaseq>

Protein Sequence

<aaseq>MTGGLPPPLRPSTAPPPPSVTRALHAINTCTTAAALAPIRGAILGDRALLRSTAVVSAFFLACGRLRHLDPALSLFACHPRPHVFVFNSLLRSLGRAPARSPLPLFRHFLRCRGVRPNRFTFPLLLTSLSSLADLRAVHCQVVKSGFGPDLHVRNALLARYADCDPDLAHAEQMFDEMPRPEVVAWTTMITSYRNRGRTFHALATFRRMLAAHVAPNRVTMVAALGACAAHCAVDTGIWIHEYVQKQGWEMDVVLGTALVDMYGKCGKVSDGMHVFSKMAKRNVYTWNSIIGALALAQDGKTALQWFSRMQNDGVQPDEVTLICVLCACAHAGFVDIGRKIFNLAIQGEYGFQPGIKHFGCMVDLLSRSGHLDDAFRVVETMPSQPNAVIWGLLLRGCRARGDSWLSEHVTMRLVELEPENASHYVLLSNLYAETGRWQEAQGILHWMKKKGLRKDAGWSLRMLEDKSKKYTTDGCLLESMSFRKDEPLIPSLPATEHGSSNTKIGSSYRYGRWTGGRVSDDNSADDIKFLDLTITHYLSGPLRIVDAEGVPAAPGDLLAVEICNLGPLPGDEWGYTAIFERENGGGFLTDHFPSARKAIWYFEGIYAYSPQIPGVRFPGLTHPGIVGTAPSAELLNIWNEREKILAETNHESIKICEVLHQRPLANLPTPENCLLGKIQEGTADWQKIANEAARTIPGRENGGNCDIKNLSRGSKVYLPVFVDGANLSTGDMHFSQGDGEVSFCGAIEMSGFLELKCEIIRGGMKEYLTPIGPTPLHVNPIFDIGPVEPRFSDWLVFEGISVDESGKQHFLDASVAYKRAVLNAIEYLSRFGYSKEQVYLLLSCCPCEGRISGIVDSPNAVATLAIPTAIFDQDVKPKRLSGKQGPKLRRLPDVLRCSSDGHLPVTQDPSGTNAP</aaseq>

Gene Sequence

<dnaseqindica>1..1436#2886..2980#3085..3158#3263..3500#3583..3773#3997..4232#4801..5044#5130..5237#6030..6158#ATGACCGGCGGCCTCCCGCCGCCTCTCCGCCCGTCCACCGCGCCGCCGCCGCCCTCCGTCACGCGCGCGCTGCACGCGATCAACACCTGCACCACCGCCGCCGCGCTCGCGCCCATCCGCGGCGCCATCCTCGGGGACCGCGCGCTCCTCCGCTCCACCGCCGTCGTCTCCGCCTTCTTCCTCGCCTGCGGCCGTCTCCGCCACCTCGACCCGGCGCTCTCCCTCTTCGCCTGCCACCCGCGCCCCCACGTGTTCGTCTTCAACTCGCTCCTCCGCTCCCTCGGCCGCGCCCCCGCCCGCTCCCCGCTCCCGCTCTTCCGCCACTTCCTCCGATGCCGCGGCGTCCGCCCCAACCGCTTCACCTTCCCTCTCCTGCTCACCTCCCTGTCCTCCCTCGCCGACCTGAGGGCCGTGCATTGCCAGGTGGTCAAGTCCGGGTTCGGGCCCGACCTCCACGTCCGCAACGCCCTCCTCGCGCGCTACGCGGACTGCGACCCTGACCTGGCGCACGCCGAGCAGATGTTCGACGAAATGCCCCGACCGGAGGTTGTCGCGTGGACCACTATGATCACCTCATACAGGAACCGAGGCCGCACCTTTCACGCTCTGGCGACCTTCCGGCGGATGCTTGCTGCTCATGTTGCACCCAACCGCGTTACCATGGTTGCTGCTCTTGGCGCTTGCGCGGCCCATTGTGCGGTCGACACTGGCATCTGGATTCACGAGTACGTGCAGAAGCAGGGATGGGAGATGGATGTTGTACTGGGCACAGCGCTGGTAGACATGTATGGGAAGTGTGGAAAAGTCTCAGATGGAATGCATGTGTTCTCAAAGATGGCCAAGAGGAATGTCTATACTTGGAACTCTATCATTGGAGCACTTGCTCTTGCACAGGATGGCAAGACGGCATTGCAGTGGTTCTCTCGGATGCAGAATGATGGTGTCCAGCCAGATGAAGTCACACTTATTTGTGTTCTTTGTGCCTGTGCACATGCCGGGTTTGTTGACATTGGGAGGAAAATATTTAACCTGGCCATACAAGGTGAGTATGGGTTTCAACCTGGGATCAAGCACTTTGGGTGCATGGTTGACCTTCTTAGTCGCTCTGGACACCTCGATGATGCCTTTAGGGTTGTTGAGACAATGCCATCACAGCCAAATGCAGTGATATGGGGCTTGCTATTAAGAGGCTGCAGGGCCCGTGGCGACTCATGGTTGAGTGAGCATGTGACAATGAGGCTGGTGGAGTTGGAACCTGAGAATGCATCGCATTATGTTCTGTTATCAAATTTGTATGCTGAGACAGGGAGGTGGCAGGAAGCTCAGGGGATCTTGCATTGGATGAAGAAGAAGGGACTGAGGAAAGATGCAGGCTGGAGCCTTCGAATGTTAGAGGACAAGTCAAAGAAGTATACTACTGATGGATGTTTGTTGGAGTATGTTGAGTGAGGAACAACATTGGAAGGTAATTCAATATATACCATGTAGAGAATCATGCCTTTGCTTTCCTTCTGAGTTTGGATGTGATCATGTAAGTTGATTCGGGAGCAGGAATTGTAGAAGGGTGCTTCTTTACTAAGATAACGGTTTTATTGGTCACAGATAGATTGATGAGTGCTTTTGGCACATGCACTTCATGAGATGTGGGGTCTATACTTGGGAAGCAAAATTGATAATGCTCTATTAATTCAATGCCATCATTAACAAAGAGTGGTTAATTTTGGTGGAAATCAGACAATTCCGCAACTCCCATTTCATACAATCTATTTCCATTTTTTGTTGGAGGTAATTGACTAATTGTACAGGTTATGGTCCTTAGGCAAAATGTTAATGGAAATTTTGACTAAGCGATATTCTTCAACAATGACTTTTCTTGCCTTCTGTAGTACTACTTCAGGAATGACTTTCTTACCCTTGTGTATAGTTTCTATTTGTACTAGTGTTTCCATTATACTCCCTCCGTTTCATATTATAAGTTGTTTTGACTTTTTTCTAGTCAAAAGTCGCTTTGACTTTTTTCTAGTCAAACTTCTTCTGGTTTGATCAAGTTTATAGAAAAAAAATTAGCAACATCTACGACACTGAATTAGTTTCATTAAATGTAACGTTGAATATATTTTGATAATATGTTTGTTTTGTGTTGAATTTGGTCAAACTTTAAAAGTTTGACCTGGAAAAAAGTAAAAACGACATATAATATGAAACGGAGGGAGTAATATTTTAGCTTGTAACAGGAAGGTTTTGCAAGGTTGTTTAATACTGTTAAATGAAAATAGAACTAATAGAACTCAATGCCCCTGTTAGTTAGACATTGCCTTGAAGAATAAATATCCAGCTGTCTAGTTGTAAATGTGATGCAAAAGAAGATAAAGTTAGACTGTTCCTGGTATTGGGGACATGGACAAGTTAGCCTGAATTGGAGCCTATTGGGGACATGGGCTCCTTCAGATTATATTTGAATATTTATCACAAATACCTAACTATGTGCATGTTTGGTAGCATAAGTGATGCATGAAGTGCCTGTGGAAAACACCGATGAATATGACGGCCCAAGTTGGTTGGTACCACTTCTGATTTCTGAACTAGAAAATATCTCATCATCTAAGCTCTGAGTGGCCTATAGAGATGTGAGGGACCAGCAGGACAATTCTTACTTGATTGTGACCACTATCTTAAGTACTTCCAAACATATAAAATAATTGCTAGGTTAAGATTTGCTTAGTTTCTTGGAAATATTTTAATAAGAGGATTTATCACTTATTTTTCAGTGCACTTTCGAGATGGAGTGTATATTTGAAACCATTCCTTCCTGGGATTCCTTTGTCTTTGCTCATTTTGTCGTTTTTTGCCTGACTCATTGCTATGGATATGCTATCATTATATAGAAGCATGAGCTTCCGGAAGGATGAACCTCTGATCCCTTCCCTCCCTGCAACAGAACATGGCTCCTCCAACACCAAGATTGGTAGTTCCTATAGATGTGAGCAAGAAGCCATGGGAGCAAAAAGTCCCTCTCCATAACCGCTGGCATCCAGATATCCCTCCTGTTGCAGATGTAACTGAAGGGGAATTGTTCCGGTTGAGATGGTCGATGGACTGGAGGAAGAGTCAGTGATGATAACTCCGCAGATGACATCAAATTCCTGGATCTCACAATTGTAAGTATATATATCGCTCCTGCAAGAGATGCCATTTAATTTTTTTTATCACAGCGCTTATTACAAAACAAGATATCAGCGAAACTGACTATTAATTCCCACAGACTCATTATCTGAGTGGGCCCTTAAGAATAGTTGATGCTGAAGGGGTTCCAGCTGCACCTGGTGATCTTCTTGCTGTAGAGATCTGCAACCTTGGTCCACTTCCCGGTGACGAATGGGGATATACTGCCATATTTGAAAGGGAGAATGGTGGTGGATTCTTAACCGACCACTTCCCTAGTGCAAGAAAGGCGATTTGGTATTTTGAAGGAATTTATGCATACTCCCCTCAAATACCAGGTAGAATTTTTTTTTTTGGTGTTGTTCTAAATGAAGCTTTTCAATTTAGGATACCTCAATAGTTCCATTTTGTGTATATCAGGTGTCCGATTTCCAGGATTAACTCATCCTGGTATAGTGGGGACTGCACCATCTGCTGAGCTTCTCAATATATGGAATGAGAGGGAAAAAATATTGGCTGAGACAAATCATGAGTCAATCAAAATCTGTGAAGTTCTACATCAGAGGCCTCTTGCCAACTTACCAACCCCTGAGAACTGTTTACTTGGAAAGGTATGACCTTCTGCCAGATCAGTGGTTTTACTTCAGTGCAAGGATTAAATGAAACATTGTTTGTTGCAGTACCTACAATTATTATTTTCATCTGGTCCAGACTGTCAGTGCAGCAATTTTACATATAGATATCAATCTAAGACATGGTTATTGGTTAAAGAGCCCTGTTTGTATTTTTTTTAAAGGAACAAACCATGTCTATAATGCTTGTTGCATGATTCAGATTCAAGAAGGGACTGCTGATTGGCAGAAAATCGCAAATGAAGCAGCAAGAACTATTCCTGGAAGGGAGAATGGAGGGAATTGTGACATCAAGAATCTAAGTAGAGGTTCCAAGGTTTATCTCCCGGTATTTGTTGATGGAGCAAATCTGAGTACTGGTGACATGCATTTTTCCCAGGGTGACGGCGAAGTCTCATTCTGTGGAGCAATAGAAATGAGTGGATTTCTTGAGCTCAAGTAATTACATTTTTTCTTGTCTATAATTCTGAGTACTTGTTAAGATGCACCCAAACAACTACTTAAAGGTGAACAAAATCCACTAACACTAATGTAACTAATCCTTGTATTGTTAGGTTTTTCACAATTCCTATAAATATACTAGACTTGAACACCTGCATAGATCATCCACATAGACATAGCTGCTTGCTTGAGACTTTTCATCTGAATGGGCACATCAAGAATGTTAATTTAAGGATCAAGGAGCACTGCTGTCACCACTCACCAAGTCAATTGTGATGGTCTGTAATATTCCATCTCCATGGCACTGCAGTAGTTTATGCTTCTTTTCTGTCATCAATGTAAGTTAAAATGCTCTAATGATTTCTAATTGAGACATTGTGTTGGTTTGCATCACTTTTGGTTGTGGAAATCAGAATCGCTCCACTAATGCATATAGCACCAGTTATTCCTAAATCATGCATCATAGTTATATCGTACTTGAGAAACTACATTTCCACTTGACTGTGCAAGAGATGCTGAGTGCTTGTGAATAATCTGATCATGAAGATTCTTACATTTTGTGTAGGTGTGAGATCATAAGAGGTGGGATGAAGGAATACTTGACTCCAATAGGTCCAACACCACTTCATGTGAATCCTATCTTTGATATAGGTCCAGTGGAACCACGTTTCTCAGACTGGTTAGTCTTTGAGGGCATCAGTGTAGACGAGTCTGGGAAGCAGCATTTTCTTGATGCATCAGTTGCCTACAAGCGTGCTGTCCTCAATGCCATTGAGTACCTTTCCAGATTTGGGTACTCCAAGGAGCAGGTAGACACAGGATTTTTGGTTATCCTGCTAATATTATGTGATCTGAACATTATCCTAAAATCAGATATTAATGGATTATATACAGGTATACCTTTTGCTATCATGCTGCCCATGTGAGGGTAGGATATCTGGAATAGTAGACTCCCCTAATGCAGTGGCAACTCTTGCCATCCCTACAGCAATATTTGACCAGGTTTGGTGCCAACAACCGAACACAATTTCCCTTACTCAGAATATCTGTTACCAATCTGTAATTATTTAGTTACAAAATATATCATACTCCCTCCAGTCAAAATTAATTGACGTTGGAACGTCAAATTTTTTTTACTAGAGGGAACCAGGGGGTAATAGAACTAGACTGACACAATTATAACTTGTTCCTTTGGTCTGATCTTAGATCTAACTATGTAAGATAGGCTAACAATTAATTGTGAATGAGTACTCTCCATGTATTACAAGTTCAGAACAAATCGATATCATTCCTGGTAGACACTTGAAACTCCTGTGTAACCATCAAGGCATTTAAGGCTGATGGCCTAGGAAGATTAGATTTATAATCTACCCATAATGCTCTCTATTCAATTATAGAGTAATCTTTCTGATTAAGGTTGGTTACACTTCGTGATGGGCTTGAATAATCAAATTACCCGTGACTCAGTGATAGAAGAGACTCAAAACAGCGTAAAATAGAACTCCCCTGATGATTTCTGACTTACTACTGCGGTCAAATCACAAGAACTAGGATACACAAGGCACACAGATAAAAAACATATCATTTGTAGTGATGCTTTGGTTAACCTTATTAACATATTGCAGTAAGAACTAGCAATAATCCAGCTGCTATTCATTCTGATCTAAAAATAATGGAGGTTTTTTTTTTTGGGGCAAGTCACTAGAGTCTACAATATTTCCTTCATAGAGATCTTTTTAAGTAGGATAATTTTATTTTAGAACTTCAGTATGTGACATTTGAATGGTTGGCTAGGATGTAAAACCAAAACGCCTGAGTGGGAAACAAGGACCAAAGTTGAGAAGGCTTCCAGATGTTTTGAGATGCTCGTCCGATGGACACCTTCCTGTTACACAGGACCCAAGCGGTACAAACGCACCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000760