Os11g0258000

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Revision as of 09:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0258000| Description = Conserved hypothetical protein| Version = NM_001189537.1 GI:297728204 GeneID:9269314| Length = 1399 bp| Definition ...")
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Gene Name

Os11g0258000

Description

Conserved hypothetical protein

Version

NM_001189537.1 GI:297728204 GeneID:9269314

Length

1399 bp

Definition

Oryza sativa Japonica Group Os11g0258000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:8539984..8541382

Sequence Coding Region

8539984..8540964,8540976..8541122,8541170..8541382

Expression

GEO Profiles:Os11g0258000

Genome Context

<gbrowseImage1> name=NC_008404:8539984..8541382 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:8539984..8541382 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagatgccgacgctccacgacaactcctaagcgacgctgaccttgaccttgtcagtgatcgggagagacaagcctactacatgctgagcgaccgggagtatgctcacacgcgagaatactcaccagagttgctgaaaaagataggtatggatgttgaattttgttctatttggaaagctgttggttggcagagatttgctgtggtagatgagcccggttctcgtttgcttactttgcaatttctgtgcactttgaaagaaatagaagatggtatttcttttcgctttttccgtaaaaagttcacgctcacatggaagggcttgagtacacttcttggttttcacgattcctgtaaaatcgatacccagaaaggaatttctgggttcgagaaaaataggttttgggaagatatttctggtgctccaatttgcaagaaacctagaacgaataatatccataatcctacacttaggctcatgcacaaatggattgctatgattttgtttcctagaagtgatctgagacccatcatgggagatgaattaattatcatgtttgccatggttagaaatatcaaaatttctcctatgaaatgtatgataagacaatggttagaaagtataaagttctccactcctattgagtgcacttctctgattactcggatagcaaaagggctaggggtcgttagcgaccagattgtttttatctcagccgctcgtccgcatattgatgaggcttatctagtgcaagggcatattttgaaacatggagtagatggatctttgatatactttttctccggttctacaaatgaaatcccgttgccaaatgcggggtatcatttgtacaactgccatgaactaaccattcccatgcagaccaaagaagaatctcgtgcaggtggaacatacagggagacgcagcatgacaaggaacgaataaggaagttcatcatcctcgacacccgtgtagatgtttggcaccaactgaggatgcacccggatggacccaagctccacgccatagcatcggagtctcaacctggtcaagcgctagtgaggaccggtggcatgtgcctcatgacattcactagggggacaaccaaccctccaggtcaagtggacttgggtgaaatcactaggagaatggacacccttgatgtgcagactgtcgagatccagtacgacctcatggaacacatagctcaaacgcaagaatggcaagaatctgctgatgctcagttcgccaacatcaacaacatgatgcagcaacagcacgatgaccttcaagcgtactttcgctttcaggggttcaatccttatcaaggaccctga</cdnaseq>

Protein Sequence

<aaseq>MEDADAPRQLLSDADLDLVSDRERQAYYMLSDREYAHTREYSPE LLKKIGMDVEFCSIWKAVGWQRFAVVDEPGSRLLTLQFLCTLKEIEDGISFRFFRKKF TLTWKGLSTLLGFHDSCKIDTQKGISGFEKNRFWEDISGAPICKKPRTNNIHNPTLRL MHKWIAMILFPRSDLRPIMGDELIIMFAMVRNIKISPMKCMIRQWLESIKFSTPIECT SLITRIAKGLGVVSDQIVFISAARPHIDEAYLVQGHILKHGVDGSLIYFFSGSTNEIP LPNAGYHLYNCHELTIPMQTKEESRAGGTYRETQHDKERIRKFIILDTRVDVWHQLRM HPDGPKLHAIASESQPGQALVRTGGMCLMTFTRGTTNPPGQVDLGEITRRMDTLDVQT VEIQYDLMEHIAQTQEWQESADAQFANINNMMQQQHDDLQAYFRFQGFNPYQGP</aaseq>

Gene Sequence

<dnaseqindica>1..981#993..1139#1187..1399#atggaagatgccgacgctccacgacaactcctaagcgacgctgaccttgaccttgtcagtgatcgggagagacaagcctactacatgctgagcgaccgggagtatgctcacacgcgagaatactcaccagagttgctgaaaaagataggtatggatgttgaattttgttctatttggaaagctgttggttggcagagatttgctgtggtagatgagcccggttctcgtttgcttactttgcaatttctgtgcactttgaaagaaatagaagatggtatttcttttcgctttttccgtaaaaagttcacgctcacatggaagggcttgagtacacttcttggttttcacgattcctgtaaaatcgatacccagaaaggaatttctgggttcgagaaaaataggttttgggaagatatttctggtgctccaatttgcaagaaacctagaacgaataatatccataatcctacacttaggctcatgcacaaatggattgctatgattttgtttcctagaagtgatctgagacccatcatgggagatgaattaattatcatgtttgccatggttagaaatatcaaaatttctcctatgaaatgtatgataagacaatggttagaaagtataaagttctccactcctattgagtgcacttctctgattactcggatagcaaaagggctaggggtcgttagcgaccagattgtttttatctcagccgctcgtccgcatattgatgaggcttatctagtgcaagggcatattttgaaacatggagtagatggatctttgatatactttttctccggttctacaaatgaaatcccgttgccaaatgcggggtatcatttgtacaactgccatgaactaaccattcccatgcagaccaaagaagaatctcgtgcaggtggaacatacagggagacgcagcatgacaaggaacgaataaggaagttcatcatcctcgacacccgtgtagatgtatgaggcaggtttggcaccaactgaggatgcacccggatggacccaagctccacgccatagcatcggagtctcaacctggtcaagcgctagtgaggaccggtggcatgtgcctcatgacattcactagggggacaaccaaccctccaggtcaagtggtgtgcctccagctccaagtgaatggtgctcgagttcctctcattaggacttgggtgaaatcactaggagaatggacacccttgatgtgcagactgtcgagatccagtacgacctcatggaacacatagctcaaacgcaagaatggcaagaatctgctgatgctcagttcgccaacatcaacaacatgatgcagcaacagcacgatgaccttcaagcgtactttcgctttcaggggttcaatccttatcaaggaccctga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0258000, RefSeq:Os11g0258000