BGIOSGA000776

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Revision as of 10:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000776| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000776, complete gene.| tag = P0460E0...")
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Gene Name

BGIOSGA000776

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000776, complete gene.

LocusTag

P0460E08.35

Ensembl Transcript ID

BGIOSGA000776-TA

Ensembl Protein ID

BGIOSGA000776-PA

Length

4073

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35343721..35347793

Sequence Coding Region

35347236..35347793,35346004..35346867,35345353..35345496,35344198..35345263,35343721..35343839

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35343721..35347793 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35343721..35347793 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCGATCAGCAGCGAGGCGCCGGTGGGGGTGTTCGCGATCGGCCCGTCCACGGCGCTGGGCCGCGCGTTGGCGCTGCGGGTGCTGCTCTGCGGCTCCCTGGGGCGGCTGCGCCACCGCCTCGCCGCGGCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGCTGGCTGCACCCGCGGGACAACACCCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGTGCGGGGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGTCCGCGTACCGGCGCAAGTTCTGGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCCGCGCGGATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTCTACGACGAGGAGCTCGTGCGCAACAAGCTCCGCGAGCTCAGGCACCGCCGCCAGGAGGGCTCGCTCAGGGACATCGTCTTCTGCATGCGCGCCGACCTGCTCAGGAATCTCGGCAACATGTGCAACTCCGAGCTCCACAAGGGGAGGCTGCAGGTGCCGAAACTCATAAAGGAGTACATTGAGGAAGTATCTACTCAGCTGAAAATGGTATGCAATTCTGATTCAGACGACTTGCCTCTCGAAGAGAAACTTGCATTTATGCATGAGACAAGACATGCCTTCGGTAGAACAGCCTTGCTGCTAAGCGGGGGTGCTTCTCTAGGTTGTTTCCATGTGGGTGTTGTGAAAACATTGGTAGAACATAAGCTTCTGCCAAGGATAATTTCAGGATCTAGCGTTGGTTCTATAATGTGCTCCATAGTAGCAACAAGGTCATGGCCAGAGCTGGAGAGCTTTTTCGAGGAGTGGCATTCCTTGAAGTTCTTTGACCAGATGGGCGGGATCTTTCCCGTAGTTAAAAGGATTTTGACTCATGGAGCTGTTCATGACATTAGACATTTGCAGACGCTTTTGAGAAATCTTACCAGCAATTTGACATTCCAAGAGGCCTATGACATGACGGGCCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAGCATGAGCCACCTCGATGCCTGAACTATTTGACATCACCTCATGTTCTCATCTGGAGTGCAGTAACTGCTTCCTGTGCTTTTCCTGGTCTTTTTGAGGCCCAAGAGTTGATGGCAAAAGACAGATTTGGAGAAACAGTTCCTTTTCATGCTCCTTTCCTGTTGGGCTTGGAAGAAAGAGTTGGTGCTACAACTCGGCGTTGGAGAGATGGGAGCTTGGAAAGTGATTTGCCAATGAAGCAATTGAAGGAATTATTCAATGTGAATCATTTCATAGTAAGCCAAGCCAATCCTCACATAGCTCCACTGTTGAGACTCAAGGAAATTATCAGGGCTTATGGAGGCAGTTTTGCTGCCAAGTTGGCTGAACTTGCTGAGATGGAAGTTAAGCATAGGTGCAACCAAATTCTCGAACTTGGATTTCCTTTAGGAGGAATAGCCAAGTTGTTTGCTCAAGATTGGGAAGGTGATGTCACAGTTGTTATGCCAGCCACGCTTGCTCAGTATTCCAAGATCATACAGAATCCATCTTACGTTGAGCTTCAGAAGGCTGCAAATCAGGGTAGGCGATGCACCTGGGAGAAGTTATCAGCCATTAGGGCAAATTGTGCTATTGAGCTGGTACTAGATGAATGTGTTGCCCTGTTGAACCATATGCGTAGGCTAAAGAGAAGCGCGGAAAGAGCAGCAGCTTCACAAGGACATGGTCCTACAATCAGACTCTGCCCATCTAGAAGGATTCCATCATGGAATCTCATAGCAAGAGAAAATTCATCTGGTTCCCTTGAAGAAGAATTCCTTATATCTCCTCGTACAAACCATCATGCAGATGGAGGAATTGCTGGACCATCTAACAAAAACCATCATGTCCAACAAAATGTACATGATGGCAGTGACAGTGAATCTGAGAGTATAGACTTAAACTCATGGACAAGAAGTGGTGGCCCTCTTATGAGGACAGCCTCAGCCAACAAATTCGTCAGTTTTGTTCAGAATCTTGAGATTGACACAGAGTTCAGAACAATTTCATCGAGGGAAGACAGAACTGATGTTGTAACACCAAATGCTAATTTCTTGGTTTCTCAGGCAATTGGTAGAGAATCTGTTGACAACAGTGCAATGCCTATTACTCCTGATAGGAGCTTGGGCAATTCAGGTTATGATCCTCATGATAGTAATGTCCCTAGATCTCCATTTGGTTGTTCAACAAGTATCATGGTTTCTGAAGGCGACTTACTGCAACCCGAAAAGATTGAAAATGGTATTCTGTTTAATGTTGTGAGAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTTCAGGGAACATCGCAGGAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCTTCGGATGACGACGATGTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCAAACATGAGCAGCCAAAATACACAACACCAGGGGTCTTCACTAGAAAATATAAATCTGTCCTCTTCAGTAGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGATATTGGTCACCGTAGCCAGCTTGAATCAAGGATCGAGGAGGGCGGGGCAGCAAGGACGCAGTTGTATTCGTCAGTGCTGTACTTGAAGCAAGGAGCGCGGGACAGAACCATAGTTGGCTACTGA</cdnaseq>

Protein Sequence

<aaseq>MDAISSEAPVGVFAIGPSTALGRALALRVLLCGSLGRLRHRLAAALRAALPVAAGWLHPRDNTRGILLAVCAVALLLRVRGRGGGRAGVRARVQSAYRRKFWRNMMRAALTYEEWAHAARMLDRETPRRATDADLYDEELVRNKLRELRHRRQEGSLRDIVFCMRADLLRNLGNMCNSELHKGRLQVPKLIKEYIEEVSTQLKMVCNSDSDDLPLEEKLAFMHETRHAFGRTALLLSGGASLGCFHVGVVKTLVEHKLLPRIISGSSVGSIMCSIVATRSWPELESFFEEWHSLKFFDQMGGIFPVVKRILTHGAVHDIRHLQTLLRNLTSNLTFQEAYDMTGRILVVTVCSPRKHEPPRCLNYLTSPHVLIWSAVTASCAFPGLFEAQELMAKDRFGETVPFHAPFLLGLEERVGATTRRWRDGSLESDLPMKQLKELFNVNHFIVSQANPHIAPLLRLKEIIRAYGGSFAAKLAELAEMEVKHRCNQILELGFPLGGIAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSYVELQKAANQGRRCTWEKLSAIRANCAIELVLDECVALLNHMRRLKRSAERAAASQGHGPTIRLCPSRRIPSWNLIARENSSGSLEEEFLISPRTNHHADGGIAGPSNKNHHVQQNVHDGSDSESESIDLNSWTRSGGPLMRTASANKFVSFVQNLEIDTEFRTISSREDRTDVVTPNANFLVSQAIGRESVDNSAMPITPDRSLGNSGYDPHDSNVPRSPFGCSTSIMVSEGDLLQPEKIENGILFNVVRRDTLLTPTGGVELQGTSQEPDVETIQTECLDDASDDDDVGLNAGDEAAIDPRANMSSQNTQHQGSSLENINLSSSVDCEAETITSKSKGSSLFDIGHRSQLESRIEEGGAARTQLYSSVLYLKQGARDRTIVGY</aaseq>

Gene Sequence

<dnaseqindica>1..558#927..1790#2298..2441#2531..3596#3955..4073#ATGGACGCGATCAGCAGCGAGGCGCCGGTGGGGGTGTTCGCGATCGGCCCGTCCACGGCGCTGGGCCGCGCGTTGGCGCTGCGGGTGCTGCTCTGCGGCTCCCTGGGGCGGCTGCGCCACCGCCTCGCCGCGGCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGCTGGCTGCACCCGCGGGACAACACCCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGTGCGGGGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGTCCGCGTACCGGCGCAAGTTCTGGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCCGCGCGGATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTCTACGACGAGGAGCTCGTGCGCAACAAGCTCCGCGAGCTCAGGCACCGCCGCCAGGAGGGCTCGCTCAGGGACATCGTCTTCTGCATGCGCGCCGACCTGCTCAGGAATCTCGGCAACATGTGCAACTCCGAGCTCCACAAGGGGAGGCTGCAGGTAACTGCTCTAATCTTAACCTGTATTACGCCCGAAATTTGATGCAATTAGATGGTTGTTAGGAGTTAGGATAGCTAATTCTCAGAACTTCAGCAATGCTTCTACTTTCCCTTTGTTACAACTGAAGTAAAGTAATTCCATTACACTAAATCTGCGAAGTGGATCCACTTCCATTACACACACCAAGATAGTCTTGGAAATTTTTTTCACTTTGTTCGGATGATTTGTTTGTGTTATGTCAGTACGGCAACAAATTATACGAAGTACTCATATTCATAGTGATAGCCTGATAGGATCCCCTTTTGATGTCCCCATTGGAGCATCTACTTAAATGTCTATTCTTATATATCACTATGTCATATTGCCAGGTGCCGAAACTCATAAAGGAGTACATTGAGGAAGTATCTACTCAGCTGAAAATGGTATGCAATTCTGATTCAGACGACTTGCCTCTCGAAGAGAAACTTGCATTTATGCATGAGACAAGACATGCCTTCGGTAGAACAGCCTTGCTGCTAAGCGGGGGTGCTTCTCTAGGTTGTTTCCATGTGGGTGTTGTGAAAACATTGGTAGAACATAAGCTTCTGCCAAGGATAATTTCAGGATCTAGCGTTGGTTCTATAATGTGCTCCATAGTAGCAACAAGGTCATGGCCAGAGCTGGAGAGCTTTTTCGAGGAGTGGCATTCCTTGAAGTTCTTTGACCAGATGGGCGGGATCTTTCCCGTAGTTAAAAGGATTTTGACTCATGGAGCTGTTCATGACATTAGACATTTGCAGACGCTTTTGAGAAATCTTACCAGCAATTTGACATTCCAAGAGGCCTATGACATGACGGGCCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAGCATGAGCCACCTCGATGCCTGAACTATTTGACATCACCTCATGTTCTCATCTGGAGTGCAGTAACTGCTTCCTGTGCTTTTCCTGGTCTTTTTGAGGCCCAAGAGTTGATGGCAAAAGACAGATTTGGAGAAACAGTTCCTTTTCATGCTCCTTTCCTGTTGGGCTTGGAAGAAAGAGTTGGTGCTACAACTCGGCGTTGGAGAGATGGGAGCTTGGAAAGTGATTTGCCAATGAAGCAATTGAAGGAATTATTCAATGTGAATCATTTCATAGTAAGCCAAGCCAATCCTCACATAGCTCCACTGTTGAGACTCAAGGAAATTATCAGGGCTTATGGAGGCAGTTTTGCTGCCAAGGTGCGTGTCAAAAACATTCCATATTGCATTCTTTATTTTTGATTGTTTATTTACTTGAGCTGTCTATGATATAACTTGATATCGATTTCATGGTGGGAAGGATTTTTATTTTCACTTGGATTGCTACATGATATAACTTTCAGTATTTCAGGCATGTTTGTGGCTTAGTAGCCTAGTGTAGAACTATGCTCAGCAAGGTTTAGTTCACTGCAGATATTAGTTGAATTTTATGTCTGATGAATAATTCAATATACTAAAACTGCTATGGGCAAGCAGGGGAGGAGACAAGCCTAGGGAAATTAGGGTTTGAACTCTAGGCTTGTCTCCTTAATCTCTTCGAAATCCATTTAAAAAGTGAAAAAAACTATGTAAAAGTTTGAAATTTAACAAATCAGATTAGTTGAGCCCTAGGCTTATGAATTTCCTTGCTTTGCCTCTATGGGCAAGCATGTATTTAAGTGCTTTGTTGTATGATCTCATAGATTCTTCAATACTATCTGTATGTAGTTGGCTGAACTTGCTGAGATGGAAGTTAAGCATAGGTGCAACCAAATTCTCGAACTTGGATTTCCTTTAGGAGGAATAGCCAAGTTGTTTGCTCAAGATTGGGAAGGTGATGTCACAGTTGTTATGCCAGCCACGCTTGCTCAGGTCTTTAATATTTCCCATTCCTTTCTTTCACAAATATCCTTGGCATTAACTGGTAAACTTACAAATGAATTCTTTCTTGTTATCATCAGTATTCCAAGATCATACAGAATCCATCTTACGTTGAGCTTCAGAAGGCTGCAAATCAGGGTAGGCGATGCACCTGGGAGAAGTTATCAGCCATTAGGGCAAATTGTGCTATTGAGCTGGTACTAGATGAATGTGTTGCCCTGTTGAACCATATGCGTAGGCTAAAGAGAAGCGCGGAAAGAGCAGCAGCTTCACAAGGACATGGTCCTACAATCAGACTCTGCCCATCTAGAAGGATTCCATCATGGAATCTCATAGCAAGAGAAAATTCATCTGGTTCCCTTGAAGAAGAATTCCTTATATCTCCTCGTACAAACCATCATGCAGATGGAGGAATTGCTGGACCATCTAACAAAAACCATCATGTCCAACAAAATGTACATGATGGCAGTGACAGTGAATCTGAGAGTATAGACTTAAACTCATGGACAAGAAGTGGTGGCCCTCTTATGAGGACAGCCTCAGCCAACAAATTCGTCAGTTTTGTTCAGAATCTTGAGATTGACACAGAGTTCAGAACAATTTCATCGAGGGAAGACAGAACTGATGTTGTAACACCAAATGCTAATTTCTTGGTTTCTCAGGCAATTGGTAGAGAATCTGTTGACAACAGTGCAATGCCTATTACTCCTGATAGGAGCTTGGGCAATTCAGGTTATGATCCTCATGATAGTAATGTCCCTAGATCTCCATTTGGTTGTTCAACAAGTATCATGGTTTCTGAAGGCGACTTACTGCAACCCGAAAAGATTGAAAATGGTATTCTGTTTAATGTTGTGAGAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTTCAGGGAACATCGCAGGAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCTTCGGATGACGACGATGTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCAAACATGAGCAGCCAAAATACACAACACCAGGGGTCTTCACTAGAAAATATAAATCTGTCCTCTTCAGTAGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGATATTGGTATGGAGATTCGTCCAACAATCTTGAGCACGGAAAGTAGTATATACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAAAAAAAATGTCACTATATTATAAACTTAGTCAAACTTTAAAAAAAACTTGAAAAAAATCAAAGCAACTTATAATATGAAATAAGGGAAGTATTTTCTAACTTTTATAATGCCTATATTTTGAATGACTAAATTAAGAATAGATTTTTTTAAAACAACTATATTTGTACGGATATATATTTTAAGGATGGATAAGTTTTTTTATGACTCTTAATTATGTATGCAAATTAAGCAATCTAAATTATGTCTGCAATTGAGGTCACCGTAGCCAGCTTGAATCAAGGATCGAGGAGGGCGGGGCAGCAAGGACGCAGTTGTATTCGTCAGTGCTGTACTTGAAGCAAGGAGCGCGGGACAGAACCATAGTTGGCTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000776