BGIOSGA000778

From RiceWiki
Revision as of 10:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000778| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000778, complete gene.| tag = P0460E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000778

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000778, complete gene.

LocusTag

P0460E08.29

Ensembl Transcript ID

BGIOSGA000778-TA

Ensembl Protein ID

BGIOSGA000778-PA

Length

2000

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35321431..35323430

Sequence Coding Region

35323364..35323430,35322986..35323203,35321431..35322903

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35321431..35323430 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35321431..35323430 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAGGCCCTCTCGAAGAAGACGACGAGCAAGGGAGGCCTCAGGACCATACCATTCATCATCTCGAACGAGGTGTTCGAGAAGGTGGCCACGTTCGGGCTGCACGCCAACATGATCCTCTACCTCACCGAGAGGTACCACATGACGGCGGCCACCGGCACCGTCGTGCTCTACTTCTGGAACGCGCTCTCCAACTTCCTCCCCATCTTCGGCGCCGTCCTCTCCGACTCCTGCCTCGGCCGCTTCCGCGTCATCGCCCTCGGCTCCGTCGTCAGCCTCGCCGGGATGTGCCTGCTGTGGCTGACGGCGATACTGCCGGCGGACAGGAGGACGCCGGAGTGCGAGGCGAGGCGGGATGACTGTCAGCTGGTGCCGTGGCAGCTGCCGCTGCTGTTCGCGTCGTTCGTTCTCATGTCGGTTGGGTCGGGCGGCATCCGGCCGTGCGCGCTGGCGTTCGGGGCGGACCAGCTGGACCGGCGCGACAACAGCGCCCGGAACGTGCGTACGCTGCAGACCTTCTTCAACTGGTACTACACCGTGCTGGGCCTCTCCATCGTGCTCGCCTCCACCGTCATCGTGTACATCCAGCAGGCCAAGGGGTGGGTCATCGGCTTCGCCGTGCCCGTCGTGCTCATGCTCACCGCGCTCACGCTGCTCCTCCTCGGCTCGCCCTTCTACCTCAAGGCGGAGGCCGACAGGAGCGTGCTCGTCGGCCTCGTGCAGGTGCTCGTCGCCAGCTACAGGAAGAGGAGGGGTCCCTTGCCGCCGGAGACGGCCGACGCGTCGCGCTTCCACAACCGGGCCGGGTACAAGCCGAGGACTCCGTCGAACAGGTTGAGGTGGTTGAACCGTGCGTGCGCGCTGGGGGACAACCCGGACAAGGAGGTGAACCCCGACGACGGCTCGGCGCGCGACCCGTGGACGCTGTGCACGGTGCAGCAGGTGGAGGACGTCAAGGCCGCCGTCCGCGTGCTGCCGATATGGTCGACGGGGTTCATGCCCGGCGTGATCATCGGCCAGCAGATGTTCCCCGTGCTGCAGGCGAAGACGATGGAGCGGCGGGTGGGCGGGCTGGAGATCCCCGCGGCGTCGTTCGGCGTCTTCAGCATCCTCACGCTCACCGTCTGGGTGGCCGTCTACGACCGCGCGCTCGTCCGCCCGCTGTCGCGGCTCACCGGCCACGCGCGCGGCGTCACCCTGCGGCAGCGGATGGGCATCGGCCTGGCGCTCTTCGCCGTGGCCATGGCCGTGGCCGCGCGCACCGAGGCCGCCCGCCGCGCCGAGGCGCTGGCCGAGGGTCTCCGCGACTACGGCCCGCAGTCGGGCCGCGCCGTGCGCATGTCCGCCATGCGGCTGGTGCCGCAGCACTGCATCACGGGACTCGCCGAGGCGCTGAACCTGATCGGGCAGATCGAGTTCTACTACTCCGAGTTCCCCAAGACCATGTCCAGCATCGGCGTCTCGCTGCTGGCGCTCGGCATGGGGTTCGGCAGCGTGGCCGGGAGCGCCATCGTCGGGGCCATCAACGCCGGCACCAGGAGCGGCGGCGGCCGCGACAGCTGGCTCTCCAGCAACCTCAACAGGGGGCACTACGACTACTACTACCTCGTCCTCGCCGCGCTGTGCGTTGCCAACCTCGCCTACTTCGTGTGGTGCGGATGGGCGTACGGCGAGGAGGGCCAGAACCGGGTGACCGCGGAGGAGGAAGCGGTGGAAGACACCAAGACCAAGGAAGAACAGCAGCAGAAACTGTAA</cdnaseq>

Protein Sequence

<aaseq>MEEALSKKTTSKGGLRTIPFIISNEVFEKVATFGLHANMILYLTERYHMTAATGTVVLYFWNALSNFLPIFGAVLSDSCLGRFRVIALGSVVSLAGMCLLWLTAILPADRRTPECEARRDDCQLVPWQLPLLFASFVLMSVGSGGIRPCALAFGADQLDRRDNSARNVRTLQTFFNWYYTVLGLSIVLASTVIVYIQQAKGWVIGFAVPVVLMLTALTLLLLGSPFYLKAEADRSVLVGLVQVLVASYRKRRGPLPPETADASRFHNRAGYKPRTPSNRLRWLNRACALGDNPDKEVNPDDGSARDPWTLCTVQQVEDVKAAVRVLPIWSTGFMPGVIIGQQMFPVLQAKTMERRVGGLEIPAASFGVFSILTLTVWVAVYDRALVRPLSRLTGHARGVTLRQRMGIGLALFAVAMAVAARTEAARRAEALAEGLRDYGPQSGRAVRMSAMRLVPQHCITGLAEALNLIGQIEFYYSEFPKTMSSIGVSLLALGMGFGSVAGSAIVGAINAGTRSGGGRDSWLSSNLNRGHYDYYYLVLAALCVANLAYFVWCGWAYGEEGQNRVTAEEEAVEDTKTKEEQQQKL</aaseq>

Gene Sequence

<dnaseqindica>1..67#228..445#528..2000#ATGGAGGAGGCCCTCTCGAAGAAGACGACGAGCAAGGGAGGCCTCAGGACCATACCATTCATCATCTGTAAGCGAAGCGAGCCTGCCTGCCTGCATGCATTCCATCCATCTTTCACCCTGATTTTGCCGGCATCATCTGCACGCCGGCTTTGCACGAGACATATGTACGAGGCTGGCTGGCCTGGATCGAGATGCAAGTTTGGTTTACTTTGTGTTGTTGGTGTCAGCGAACGAGGTGTTCGAGAAGGTGGCCACGTTCGGGCTGCACGCCAACATGATCCTCTACCTCACCGAGAGGTACCACATGACGGCGGCCACCGGCACCGTCGTGCTCTACTTCTGGAACGCGCTCTCCAACTTCCTCCCCATCTTCGGCGCCGTCCTCTCCGACTCCTGCCTCGGCCGCTTCCGCGTCATCGCCCTCGGCTCCGTCGTCAGCCTCGCCGTAAGCACAAACACCAACCAAACCATCCATCCATCCATCGGAGTTTCTTGCGCGATGACACGTTAGACGTGCGTGCGTGCAGGGGATGTGCCTGCTGTGGCTGACGGCGATACTGCCGGCGGACAGGAGGACGCCGGAGTGCGAGGCGAGGCGGGATGACTGTCAGCTGGTGCCGTGGCAGCTGCCGCTGCTGTTCGCGTCGTTCGTTCTCATGTCGGTTGGGTCGGGCGGCATCCGGCCGTGCGCGCTGGCGTTCGGGGCGGACCAGCTGGACCGGCGCGACAACAGCGCCCGGAACGTGCGTACGCTGCAGACCTTCTTCAACTGGTACTACACCGTGCTGGGCCTCTCCATCGTGCTCGCCTCCACCGTCATCGTGTACATCCAGCAGGCCAAGGGGTGGGTCATCGGCTTCGCCGTGCCCGTCGTGCTCATGCTCACCGCGCTCACGCTGCTCCTCCTCGGCTCGCCCTTCTACCTCAAGGCGGAGGCCGACAGGAGCGTGCTCGTCGGCCTCGTGCAGGTGCTCGTCGCCAGCTACAGGAAGAGGAGGGGTCCCTTGCCGCCGGAGACGGCCGACGCGTCGCGCTTCCACAACCGGGCCGGGTACAAGCCGAGGACTCCGTCGAACAGGTTGAGGTGGTTGAACCGTGCGTGCGCGCTGGGGGACAACCCGGACAAGGAGGTGAACCCCGACGACGGCTCGGCGCGCGACCCGTGGACGCTGTGCACGGTGCAGCAGGTGGAGGACGTCAAGGCCGCCGTCCGCGTGCTGCCGATATGGTCGACGGGGTTCATGCCCGGCGTGATCATCGGCCAGCAGATGTTCCCCGTGCTGCAGGCGAAGACGATGGAGCGGCGGGTGGGCGGGCTGGAGATCCCCGCGGCGTCGTTCGGCGTCTTCAGCATCCTCACGCTCACCGTCTGGGTGGCCGTCTACGACCGCGCGCTCGTCCGCCCGCTGTCGCGGCTCACCGGCCACGCGCGCGGCGTCACCCTGCGGCAGCGGATGGGCATCGGCCTGGCGCTCTTCGCCGTGGCCATGGCCGTGGCCGCGCGCACCGAGGCCGCCCGCCGCGCCGAGGCGCTGGCCGAGGGTCTCCGCGACTACGGCCCGCAGTCGGGCCGCGCCGTGCGCATGTCCGCCATGCGGCTGGTGCCGCAGCACTGCATCACGGGACTCGCCGAGGCGCTGAACCTGATCGGGCAGATCGAGTTCTACTACTCCGAGTTCCCCAAGACCATGTCCAGCATCGGCGTCTCGCTGCTGGCGCTCGGCATGGGGTTCGGCAGCGTGGCCGGGAGCGCCATCGTCGGGGCCATCAACGCCGGCACCAGGAGCGGCGGCGGCCGCGACAGCTGGCTCTCCAGCAACCTCAACAGGGGGCACTACGACTACTACTACCTCGTCCTCGCCGCGCTGTGCGTTGCCAACCTCGCCTACTTCGTGTGGTGCGGATGGGCGTACGGCGAGGAGGGCCAGAACCGGGTGACCGCGGAGGAGGAAGCGGTGGAAGACACCAAGACCAAGGAAGAACAGCAGCAGAAACTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000778