BGIOSGA000798

From RiceWiki
Revision as of 10:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000798| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000798, complete gene.| tag = RID| t...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000798

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000798, complete gene.

LocusTag

RID

Ensembl Transcript ID

BGIOSGA000798-TA

Ensembl Protein ID

BGIOSGA000798-PA

Length

1927

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35061610..35063536

Sequence Coding Region

35063398..35063536,35063005..35063122,35062775..35062931,35062465..35062671,35061610..35062230

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35061610..35063536 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35061610..35063536 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCCATGTGGGTGTGGCTCACAACCCCGGCGACGGCGCCGGCTCCGCGCACAGGCTACCGCTCGCCCCGCGTCGTCCCACGGCTCTTCCAGGTCCGGCTCTGCGCGTCACCCCGCGCATTAACGCCCGTGCAGCCGGCCGCGACCGACGGACGCGGCGAGAGGATAGAGACCAGGGGCGGCCGGGCGGACGGACAGAGCAACCAGCGCCGGCTGCCGGCTTAGCTAGCTCGCGGCGGAGCATGCCGAGATCCAGGGGGTCCGAGCTGCCGCAGCGAGCGTCGCCGCGGGCGCCGCTGCACCTCAAGACGACGGCCTGCTCGGATGCGAATGGCGCGCACCACCGTACAGTCGTCGACCGGAGCAGCCCCAAGCTCGCCGACCGCCACTCGCCGCGCAGCCCGCTGCATGAGAAGAAGCGCGCGGGGACGCGGGTGGCTGAGCTGGAGACGAAGCTGGGCAAGGTGCAGGACGAGCTCAAGAAGCTGCGGGAGCAGCTCGCCACCGCCGAGGCCGCCAAGAAGGACGCGCAGGTCGCGCTCGAGGAGGCTAAGAAGCGCGTTGGCACCAAGGGGAGCCCCGCTTCCGCCGCCGCGGCGTCTCCGCGCTCCCCATCTCCGAGCGCGGCCGGCGCCGAGGACGGCGAGGAGGTGAGCTGTGGCATAAAGGCTGCTTTGGCTGAGAAGGAACTGGAGGAGGAAGAGACAAAGAAGATGATCGAAGAGGAGAGCATTGACGCAACGGCCATTGACTCCGGCGAGAAGGAGAACCCGGAGGTCGCGGAACTAAAGGCCAAGCTGATGGCGAAGGACATGGAGGTCGCCATACTCACGGCCGACAATGCCGAGCTCAAGAAGCAGGTTGGTGAAGCCGCGGAGGCGGCCAAGAAAGCTGAGGAGGCGGCGGCGGCCAAGGCGTCCTTGGTCGAGCAGGACCTGAAGGAGAGAGCGGCGCGGGAGGCCCGCATGGGCGAGCAGCTGAGGGCGTCGGAAGCCGCTCGGGAGACGCTGGAGGCCGAGATGCGGCGCCTGCGCGTGCAGACCGAGCAATGGCGAAAGGCCGCGGAGGCGGCCGCCGCGGTGATTGGCGGGGATGCCCACTTCGTCGGCCACAATGGCAACGGCTGGGGCTCCCCCGCGACGATGCCGGACGACTGCGACGACGAGGGGTTCGGTGGCAAGAGGAAGGGAGCCGGTATCCGGATGCTTGGCGACCTGTGGAAGAAGAAGGGGAGCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MTHVGVAHNPGDGAGSAHRLPLAPRRPTALPGPALRVTPRINARAAGRDRRTRREDRDQGRPGGRTEQPAPAAGLASSRRSMPRSRGSELPQRASPRAPLHLKTTACSDANGAHHRTVVDRSSPKLADRHSPRSPLHEKKRAGTRVAELETKLGKVQDELKKLREQLATAEAAKKDAQVALEEAKKRVGTKGSPASAAAASPRSPSPSAAGAEDGEEVSCGIKAALAEKELEEEETKKMIEEESIDATAIDSGEKENPEVAELKAKLMAKDMEVAILTADNAELKKQVGEAAEAAKKAEEAAAAKASLVEQDLKERAAREARMGEQLRASEAARETLEAEMRRLRVQTEQWRKAAEAAAAVIGGDAHFVGHNGNGWGSPATMPDDCDDEGFGGKRKGAGIRMLGDLWKKKGSK</aaseq>

Gene Sequence

<dnaseqindica>1..139#415..532#606..762#866..1072#1307..1927#ATGACCCATGTGGGTGTGGCTCACAACCCCGGCGACGGCGCCGGCTCCGCGCACAGGCTACCGCTCGCCCCGCGTCGTCCCACGGCTCTTCCAGGTCCGGCTCTGCGCGTCACCCCGCGCATTAACGCCCGTGCAGCCGGTGCGCCACCAACCAGAAAACCAGAGAGACCCACGTAACGTTCGGCTGGGTGTGCGGTGCGTGGCGTGGCGTTCCCAAGGCGTTCCAGCTGCGTTCAAATTTGAAATCACCGGTGCGGTGGCCTCGTGGGAGGCGGTGCCACGATTTATTAATACGCAAACAATTCCGTTTTCCCTTGCACGAGGGCTCCTTTTCTTTTCGCCGCTACCTGCGCGGCGCCACATTCGCCTGCATTTTCCATGAGCCAGTCTTCCCCGCGTTTGCTCTCATCGTAGGCCGCGACCGACGGACGCGGCGAGAGGATAGAGACCAGGGGCGGCCGGGCGGACGGACAGAGCAACCAGCGCCGGCTGCCGGCTTAGCTAGCTCGCGGCGGAGCATGCCGAGATCCAGGTGCGTGACCTGCGATAGCGAGGTGGTTTCCCCGTCGAGGTGTTCCCATTTCTGACGCGGTTGATGATTGCAGGGGGTCCGAGCTGCCGCAGCGAGCGTCGCCGCGGGCGCCGCTGCACCTCAAGACGACGGCCTGCTCGGATGCGAATGGCGCGCACCACCGTACAGTCGTCGACCGGAGCAGCCCCAAGCTCGCCGACCGCCACTCGCCGCGCAGCCCGCTGCATGAGGTAAGTAATAAGCTGCGAAGCTTCTCCTTCCGTTTTCAGTTTTCCCGGTGAGGCCAAGGAGCAGCGGCTCAATCGCTTTTGGCGGTTATTGGTGGGTTTACAGAAGAAGCGCGCGGGGACGCGGGTGGCTGAGCTGGAGACGAAGCTGGGCAAGGTGCAGGACGAGCTCAAGAAGCTGCGGGAGCAGCTCGCCACCGCCGAGGCCGCCAAGAAGGACGCGCAGGTCGCGCTCGAGGAGGCTAAGAAGCGCGTTGGCACCAAGGGGAGCCCCGCTTCCGCCGCCGCGGCGTCTCCGCGCTCCCCATCTCCGGTTGCGGTCGAAACCCCCAGAAGACTGAGCAGCAGCTGAAGGTGGCGGAGCCGCCGGCCGAGGAGGAGAGCAGGCATAAACTCCCCCGCGACGGATGTGTTCGAGGTCGTCCGGACCGAATCGGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCAGAGCGCGGCCGGCGCCGAGGACGGCGAGGAGGTGAGCTGTGGCATAAAGGCTGCTTTGGCTGAGAAGGAACTGGAGGAGGAAGAGACAAAGAAGATGATCGAAGAGGAGAGCATTGACGCAACGGCCATTGACTCCGGCGAGAAGGAGAACCCGGAGGTCGCGGAACTAAAGGCCAAGCTGATGGCGAAGGACATGGAGGTCGCCATACTCACGGCCGACAATGCCGAGCTCAAGAAGCAGGTTGGTGAAGCCGCGGAGGCGGCCAAGAAAGCTGAGGAGGCGGCGGCGGCCAAGGCGTCCTTGGTCGAGCAGGACCTGAAGGAGAGAGCGGCGCGGGAGGCCCGCATGGGCGAGCAGCTGAGGGCGTCGGAAGCCGCTCGGGAGACGCTGGAGGCCGAGATGCGGCGCCTGCGCGTGCAGACCGAGCAATGGCGAAAGGCCGCGGAGGCGGCCGCCGCGGTGATTGGCGGGGATGCCCACTTCGTCGGCCACAATGGCAACGGCTGGGGCTCCCCCGCGACGATGCCGGACGACTGCGACGACGAGGGGTTCGGTGGCAAGAGGAAGGGAGCCGGTATCCGGATGCTTGGCGACCTGTGGAAGAAGAAGGGGAGCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000798