BGIOSGA000804

From RiceWiki
Revision as of 10:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000804| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000804, complete gene.| tag = OsI_037...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000804

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000804, complete gene.

LocusTag

OsI_03784

Ensembl Transcript ID

BGIOSGA000804-TA

Ensembl Protein ID

BGIOSGA000804-PA

Length

2508

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34935930..34938437

Sequence Coding Region

34937697..34938437,34936743..34937643,34936509..34936603,34935930..34936022

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34935930..34938437 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34935930..34938437 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCCTCCGCGCGCGCAAGCGGGGGCGGGGCGACGCCGGCGCCGGCGCGGCGGCGGTGCTCGGGGCGCTCGGGCTCGGGGGCTTCGCGGGGCTCGACCTCCACCGCGCGGCGCCCGCGGGCGAGGCCGAGCTCGAGCAGCTCGCCGCGGCGTACGACCGCGCCTCGGGCCGCATTTCCGTCTCCATCCGCGGCGCGGGCGTCTCCGCCTCGCCCGCGGACCTCGCGGTCGCCCTCGGGCTGCCGCTCGGCCCGGCCGCGCTGGGCCCCGAGGTGGACGCGTCCGTGTTCCTCTCCGAGGAGGCGATCGCCGCCGTGAGGGGGTTCCTCCGCGATCGCGTGCTGCTGGGAGGCGGTGGTGGTGGTGGCCGGGAGTTGCCGGGGGAGGCTGCGGTGGCGCTGCGGCTGGTGGAGGAGGGGAAGGCTTACGCGGTGGATTGGTGCCGGTTGTTTTGGGAGTTGCTGAAGATGGATTTGGTGAGCGGGAAGCCACGGCGCTACGCGCCGCACCTCCTCCGTCTGATCGAGTACCAAAGGCCCGAGCTTTTCGCCGAGGTTGATGGGAGTTCGCCTCTTGGGAAAAGAAGGAAAAGCGCGGCGTTTTCGCGGCAATGCCAGTGGGAAGATGAAAAGGAGACGGACTTGATTGACGCAGAGTGTGGAGATTCTCGTACCCAGGCGGCTGAAGCAGAGGTGGAGAGGAGCAGCCAGAGCATTGGAGACTTGGAGGAGATGCCATTCAATTGTTGGATTGGGGGAATGATCCATGGAGTGAACGAGGGAAATGCGGAGCTTGGATCTCAGAAAAGCTTGCCTTCAGAAATCGAGGTTTCGGGCTGTGAGATGGGAGGTAATGCTGCTGCTGGTTTGACCGCCAAAGATCAGAGCTCGGATGATTCGTCTCTCCTTAGCCTTCTTCGCACAATGGATGAGCAAGATGACTCCTCAAGCCATCAGAATGTGATCTCCGGGGCCAAGCCCCAACCAGGGCCAAATCAGCAGAGCATAATTGAGATCGAAGATGAAGAGGATGACGATGATGATCAGGTGGGTGTTGGTCATGTCCCTCCCAACATTCAAAATGGACATTTTGGCCTCAACAATTATTTTGTGCAACAGAGGGCAACAGAAGGCTTTCAAAATGATCAAACGCTTCCATCTTTCCTTGCCTGCACACAGCAAATTAAAGCTTGCATGGATGACAACTTCTTGGATAAGATGAAGGCTATCATGGATGCTCGAGCTGCTAACCAGCGCATGATTAACATGATAACACAAAAGGATTATATGATTGCAGCCACCAAGAGGGACATACTGGAGGATCTTGGAGCAAGGCACGTTATGATCAGTCAATTCGAACATGACATTGAATTGATGCGTCTCACCATTCAACAATACCGAAAGTTGTTTGAGAACACTTCTGCTGCATATCTAGAGTATAGGAACAGGATGTCACGTGAGGAGGGTGATGGTTCATCTCTGGAAGTTATTGGCATAGCTGATGAGACGGAGCAATTTGTTAGGATGCAGCAACTGGACATTTATCAGAGGCTTAATAAGTTTCAAAAGCTTTGGCTCACGAAATATTCAGATCTTGTTGGGCATTTGACAAGAGTAGCAGAATGCATGACATACCTCAGCTTGGAAGGCGAAGAATTGGGCAAAGAATTGCTGAGTAAGACAAAAGATGCAGAGCGGGAAGGTGAAGGGGATCATTGCAGTAGCGCTGTAGTGATAGATGAATTAGCACAACCTGATCAGAGGAATGATAAGGAGAGCATGATTGTCAATGGAGTTTCTGGAATCTGCAACGAAGATGAGGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MATLRARKRGRGDAGAGAAAVLGALGLGGFAGLDLHRAAPAGEAELEQLAAAYDRASGRISVSIRGAGVSASPADLAVALGLPLGPAALGPEVDASVFLSEEAIAAVRGFLRDRVLLGGGGGGGRELPGEAAVALRLVEEGKAYAVDWCRLFWELLKMDLVSGKPRRYAPHLLRLIEYQRPELFAEVDGSSPLGKRRKSAAFSRQCQWEDEKETDLIDAECGDSRTQAAEAEVERSSQSIGDLEEMPFNCWIGGMIHGVNEGNAELGSQKSLPSEIEVSGCEMGGNAAAGLTAKDQSSDDSSLLSLLRTMDEQDDSSSHQNVISGAKPQPGPNQQSIIEIEDEEDDDDDQVGVGHVPPNIQNGHFGLNNYFVQQRATEGFQNDQTLPSFLACTQQIKACMDDNFLDKMKAIMDARAANQRMINMITQKDYMIAATKRDILEDLGARHVMISQFEHDIELMRLTIQQYRKLFENTSAAYLEYRNRMSREEGDGSSLEVIGIADETEQFVRMQQLDIYQRLNKFQKLWLTKYSDLVGHLTRVAECMTYLSLEGEELGKELLSKTKDAEREGEGDHCSSAVVIDELAQPDQRNDKESMIVNGVSGICNEDEV</aaseq>

Gene Sequence

<dnaseqindica>1..741#795..1695#1835..1929#2416..2508#ATGGCGACCCTCCGCGCGCGCAAGCGGGGGCGGGGCGACGCCGGCGCCGGCGCGGCGGCGGTGCTCGGGGCGCTCGGGCTCGGGGGCTTCGCGGGGCTCGACCTCCACCGCGCGGCGCCCGCGGGCGAGGCCGAGCTCGAGCAGCTCGCCGCGGCGTACGACCGCGCCTCGGGCCGCATTTCCGTCTCCATCCGCGGCGCGGGCGTCTCCGCCTCGCCCGCGGACCTCGCGGTCGCCCTCGGGCTGCCGCTCGGCCCGGCCGCGCTGGGCCCCGAGGTGGACGCGTCCGTGTTCCTCTCCGAGGAGGCGATCGCCGCCGTGAGGGGGTTCCTCCGCGATCGCGTGCTGCTGGGAGGCGGTGGTGGTGGTGGCCGGGAGTTGCCGGGGGAGGCTGCGGTGGCGCTGCGGCTGGTGGAGGAGGGGAAGGCTTACGCGGTGGATTGGTGCCGGTTGTTTTGGGAGTTGCTGAAGATGGATTTGGTGAGCGGGAAGCCACGGCGCTACGCGCCGCACCTCCTCCGTCTGATCGAGTACCAAAGGCCCGAGCTTTTCGCCGAGGTTGATGGGAGTTCGCCTCTTGGGAAAAGAAGGAAAAGCGCGGCGTTTTCGCGGCAATGCCAGTGGGAAGATGAAAAGGAGACGGACTTGATTGACGCAGAGTGTGGAGATTCTCGTACCCAGGCGGCTGAAGCAGAGGTGGAGAGGAGCAGCCAGAGCATTGGAGACTTGGAGGAGATGCCAGTTTTTGGAGAGCGCAAGCAATTCAATGCTGTTGATCTTGTGGGTTACAAAAGTTCAATTGTTGGATTGGGGGAATGATCCATGGAGTGAACGAGGGAAATGCGGAGCTTGGATCTCAGAAAAGCTTGCCTTCAGAAATCGAGGTTTCGGGCTGTGAGATGGGAGGTAATGCTGCTGCTGGTTTGACCGCCAAAGATCAGAGCTCGGATGATTCGTCTCTCCTTAGCCTTCTTCGCACAATGGATGAGCAAGATGACTCCTCAAGCCATCAGAATGTGATCTCCGGGGCCAAGCCCCAACCAGGGCCAAATCAGCAGAGCATAATTGAGATCGAAGATGAAGAGGATGACGATGATGATCAGGTGGGTGTTGGTCATGTCCCTCCCAACATTCAAAATGGACATTTTGGCCTCAACAATTATTTTGTGCAACAGAGGGCAACAGAAGGCTTTCAAAATGATCAAACGCTTCCATCTTTCCTTGCCTGCACACAGCAAATTAAAGCTTGCATGGATGACAACTTCTTGGATAAGATGAAGGCTATCATGGATGCTCGAGCTGCTAACCAGCGCATGATTAACATGATAACACAAAAGGATTATATGATTGCAGCCACCAAGAGGGACATACTGGAGGATCTTGGAGCAAGGCACGTTATGATCAGTCAATTCGAACATGACATTGAATTGATGCGTCTCACCATTCAACAATACCGAAAGTTGTTTGAGAACACTTCTGCTGCATATCTAGAGTATAGGAACAGGATGTCACGTGAGGAGGGTGATGGTTCATCTCTGGAAGTTATTGGCATAGCTGATGAGACGGAGCAATTTGTTAGGATGCAGCAACTGGACATTTATCAGAGGCTTAATAAGTTTCAAAAGCTTTGGCTCACGAAATATTCAGATCTTGTTGGGCATTTGACAAGAGTAGCAGAATGCATGACATACCTCAGTAATGGACTGCAAAGACTGAAAGATTCAACAACAATTCCCGACCTTAACAATGGCAAGCCTCAACTATGAATTATGTCTTCATATTTCCATTATCCTAAAAACTTTAGTAAACCAACTCATTTTTGTTCTACCCGCAGGCTTGGAAGGCGAAGAATTGGGCAAAGAATTGCTGAGTAAGACAAAAGATGCAGAGCGGGAAGGTGAAGGGGATCATTGCAGTAGCGCTGTAGTGGTGAGTTTAGGTCTTGTGCTGCTGAATTTTAAAGTACATTGAACGATTGCTGTTTGAGCAATTTGTTTAGCCAACGCAACAAATATTTGCCACGACTTGGAAATTTGCCATAAAATTGCTTGCTACTTCCATCAAAAGTAGATGGCCCTGAGGTTTTTTATCCAATATGACACTCTAGCTAATTGCACTGAAGCTTCGAAGCCCAATTACTATCAACCCCCTCGTTTAGCCTCAGCTTATAAGCATAAGCGCAGATTTAAATTTTAAAACTTAATTTTAGAGTTGATTTTAGGGTTTTCCGTATAAATTATTTTTAATGGCTAATAAGCCATTTCGCTAATATTAAGTTAGTATAAGCCAAACGTGTGTTTCGTATCTTTCTTCAGTTTTTCTTTGGCACAATGCCGGAGCATAACATGTCATGATGCTACGGTGCTGGAAGGAAAGCAGACATATTCAGATCCTGACATTGCACTTACTTTGCAGATAGATGAATTAGCACAACCTGATCAGAGGAATGATAAGGAGAGCATGATTGTCAATGGAGTTTCTGGAATCTGCAACGAAGATGAGGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000804