Os11g0258700

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Revision as of 09:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0258700| Description = Similar to Ra| Version = NM_001074174.2 GI:297611588 GeneID:4350228| Length = 3867 bp| Definition = Oryza sativa Ja...")
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Gene Name

Os11g0258700

Description

Similar to Ra

Version

NM_001074174.2 GI:297611588 GeneID:4350228

Length

3867 bp

Definition

Oryza sativa Japonica Group Os11g0258700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:8585784..8589650

Sequence Coding Region

8585784..8585852,8585936..8586379,8586696..8587373,8587876..8587935,8588360..8588456
,8589298..8589650

Expression

GEO Profiles:Os11g0258700

Genome Context

<gbrowseImage1> name=NC_008404:8585784..8589650 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:8585784..8589650 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgggagatctccggcggatcttcttcgtccttgagctccggtggccgcttcttcgtccctgaggatcggtggtggtcgccggtggtcgcctcgaggtggtgggcactagacccggtctccaggtggttggggaccaccggatctggaacccccgggctccgaccgctgcctccttcacccttcttgacgccagatccgccgcctccatccacatgcgctcaagtcatcgccgtcgtttcttcgtctcctttgcgcccaagtcgtcgccgcctgcatccacatgcgttgacttgcctccagctgcacacaatgagctcagatccagtgccaacaagtcctctttcacccatgttgccaggcaaaagcttcgcaagcaatgaatatgtttggctgtcaaacgctcagtctgcagatagaaaactattccatcgcgcgctcatagcaaagacaatcgtctgcgtgccatttatcatgcatggtgtccttgagctcgggaccactgatccggtttcggaggacccggctctcgtcgaccgtatcacggcgtcgttatgggatacgccgccccgcgcggcgttctcgtcggaggcgggagtcgccgacatcgtcgtcttcgaagacctcgaccatggcaacaccgccgtcgaagcgacgacgacgatggtcccgggggagccggagcctcacgctgtagccggcggcgaggtcgccgagtgcgagtccaacgcccacaacgacctcgagcagatcaccatggacgacatcggcgagctctacagcctctgcgaggagctggacgtcctcgacgacgacagtagcagctgggttgcggatccctggtcgtcttttcagctagtcccgacggcggaagctactgacgtcgacgatgccgtcgtcgccgctctaggcgccattgatggatcttgcaggccgtcgccgtcgagttttgtggcgtggaagaggacgccggactcggacgaggtgcaggccgtgccgctcatcagcggagagccgccacagaagttgctgaagaaagctgtcgccggcgccggtgcctggatgaacaatgctgacggcagcgcggcgacgatgacgactgatcaaggaagcagcatcaagaaccatgtcatgtcagagagaaggcgccgggagaagctcaaagagatgttcttgattcttaaatcagtggacaaagcatcaattctagcagaaacgatagcatacctcaaagagctggagaaaagggtggaagagctggaatccagcagccaaccatcgccgcgtccaatggaaacaacaagaagaagatgctgcaagagcaccggcaagaaggtttctgcaggagccagagccaagagaaaggcgccggcgccggaggacaccgacggggagcggcgccattgtgtgagcaacgtgaacgtcaccatcatggacaacaaggagcttctcctcgagctgcaatgccagtggaaggaattgctgatgacgagagtgttcgacgcgatcaagggagtctccctggatgtcctctcggtgcaggcatcaacatcggatggtctccttggactgaagatacaagctaaggtcgtcgtctcagcggctaagagctcgcagcagatatgcagcatctttgcctcacctgctgccgtcgaacctgggatgattacagaagctctccggaaagctatagcaagctag</cdnaseq>

Protein Sequence

<aaseq>MREISGGSSSSLSSGGRFFVPEDRWWSPVVASRWWALDPVSRWL GTTGSGTPGLRPLPPSPFLTPDPPPPSTCAQVIAVVSSSPLRPSRRRLHPHALTCLQL HTMSSDPVPTSPLSPMLPGKSFASNEYVWLSNAQSADRKLFHRALIAKTIVCVPFIMH GVLELGTTDPVSEDPALVDRITASLWDTPPRAAFSSEAGVADIVVFEDLDHGNTAVEA TTTMVPGEPEPHAVAGGEVAECESNAHNDLEQITMDDIGELYSLCEELDVLDDDSSSW VADPWSSFQLVPTAEATDVDDAVVAALGAIDGSCRPSPSSFVAWKRTPDSDEVQAVPL ISGEPPQKLLKKAVAGAGAWMNNADGSAATMTTDQGSSIKNHVMSERRRREKLKEMFL ILKSVDKASILAETIAYLKELEKRVEELESSSQPSPRPMETTRRRCCKSTGKKVSAGA RAKRKAPAPEDTDGERRHCVSNVNVTIMDNKELLLELQCQWKELLMTRVFDAIKGVSL DVLSVQASTSDGLLGLKIQAKVVVSAAKSSQQICSIFASPAAVEPGMITEALRKAIAS </aaseq>

Gene Sequence

<dnaseqindica>3799..3867#3272..3715#2278..2955#1716..1775#1195..1291#1..353#atgcgggagatctccggcggatcttcttcgtccttgagctccggtggccgcttcttcgtccctgaggatcggtggtggtcgccggtggtcgcctcgaggtggtgggcactagacccggtctccaggtggttggggaccaccggatctggaacccccgggctccgaccgctgcctccttcacccttcttgacgccagatccgccgcctccatccacatgcgctcaagtcatcgccgtcgtttcttcgtctcctttgcgcccaagtcgtcgccgcctgcatccacatgcgttgacttgcctccagctgcacacaatgagctcagatccagtgccaacaagtcctctttcacccatgtattttgtcttgtgctgttcatggtgttccaattgttgctactgtgattgatgattctgattcctatggtgattgagattcttgtaattttgttttgtgatttggacaactacgatggagcaaagaataattgtgacgattcttttgatttgtgaatgccaaatgcaatcggtcgaaatgaatgtgatggtaacctaagaggacggtgtttctcttttttccccttctttttcacaccaatgacggtcccaattagttgggggccagtcagaggtgactctcacctgtgacgggttttagttgggggccgtttaaggtgactcttacttctgacgggtctacacccgtcacaggtgactcaaagtcatcagtgaccactaatctctgaccgggggctgaacccgtgaaagttgaggatttaagcccgtcagtggtgtcctgatcgagtgtagtgatataacgcgatcatgactcatgtctctagtttaaaaagaaaaaaagacgtgacccacgaccacaaggttcattaagaggcttcaaattaaaaatgagattgggggagagatgaattccgcaatattttctttttgtactagatgaaactcaaatggaagatgaactggctgctagctagtcaacctgcagcctgctgccagtctcttatcttgatactctctctctctctcctaaaatgtaaagcatttttaactataaatttagataactgtttgtctaaattcatagctaaaaattgctatatttcgagacagaggaagtatatgattgtgcttgtatactgtaacgaactgttcttctcttgctattgatgaaccgtgtcaggttgccaggcaaaagcttcgcaagcaatgaatatgtttggctgtcaaacgctcagtctgcagatagaaaactattccatcgcgcgctcatagcaaaggtacaacgaactcctatatatatactgtacttcgttgcatgagtaccatttatcaataaattcttgcgcttggcagtatctataaattaagaatttgtattatattcttctccattttcatatgtatataatgtcccgttcatgcgatattagccatatcgtctttcgattactcatttttgtttgtttttaattatgtatgacgacaatggtgctgctgatctacctacatcacagagtgcatctattaaggtacaatttcatgcatcatagtactgcatgcatatagctactttctccatggcgaaataacgtcattttaaaatatatgtagccaatataaatttactagctgactatagctagctgctgtattgaagtgtactttcacagtttcttattgcagctgtaacttgttttacagacaatcgtctgcgtgccatttatcatgcatggtgtccttgagctcgggaccactgatccggtaagttatactccctccgtccaaaaaaagacaaaccctggtttccgtgtctaatgtttgaccgtccgtcttatttaaaaaaattatgaaaaaaattaaaaagacaagtcgcgtataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaattataaaaaaatttcatataagacggaccgttaaagttagacacggaaacccatagtttgtctttttttgggacggagcgagtaattgctctgcctaaacatacaagacctaaaaatggagcatgcattgatgcatgtgcagcatgatcggctgctgatgaacggcatgtacagcacgcatgcattctccttgctatattctctcacagtaactcgatcgtgctcccctgcctggccgtccggccttgatcaaattttcgacgggatcttgtttcgaaatattcgaattaacaaacaatattagcaaatgaagtggcatactgctcttgaatttgcataggtttcggaggacccggctctcgtcgaccgtatcacggcgtcgttatgggatacgccgccccgcgcggcgttctcgtcggaggcgggagtcgccgacatcgtcgtcttcgaagacctcgaccatggcaacaccgccgtcgaagcgacgacgacgatggtcccgggggagccggagcctcacgctgtagccggcggcgaggtcgccgagtgcgagtccaacgcccacaacgacctcgagcagatcaccatggacgacatcggcgagctctacagcctctgcgaggagctggacgtcctcgacgacgacagtagcagctgggttgcggatccctggtcgtcttttcagctagtcccgacggcggaagctactgacgtcgacgatgccgtcgtcgccgctctaggcgccattgatggatcttgcaggccgtcgccgtcgagttttgtggcgtggaagaggacgccggactcggacgaggtgcaggccgtgccgctcatcagcggagagccgccacagaagttgctgaagaaagctgtcgccggcgccggtgcctggatgaacaatgctgacggcagcgcggcgacgatgacgactgatcaaggaagcagcatcaagaaccatgtcatgtcagagagaaggcgccgggagaagctcaaagagatgttcttgattcttaaatcagtcgtcccatccattcacaaggtactccatccgtattttaatgtatgacgatgttgactttttaacaaacgtttgatttttcgtcttataaaaaaatttataatcaaatgttctttaagaatgacataagtatttttgtatttgcataaaaaatttgaataagacgaatgatcaaacgttggttaaaaagtcaacggcgtcatacattaaaatacggagggagtaattacttgcaattttttacaaccaaattcacaaggtagtatatatactgttcacaagacgatctgaattcatgagatgtctcttgctgcaggtggacaaagcatcaattctagcagaaacgatagcatacctcaaagagctggagaaaagggtggaagagctggaatccagcagccaaccatcgccgcgtccaatggaaacaacaagaagaagatgctgcaagagcaccggcaagaaggtttctgcaggagccagagccaagagaaaggcgccggcgccggaggacaccgacggggagcggcgccattgtgtgagcaacgtgaacgtcaccatcatggacaacaaggagcttctcctcgagctgcaatgccagtggaaggaattgctgatgacgagagtgttcgacgcgatcaagggagtctccctggatgtcctctcggtgcaggcatcaacatcggatggtctccttggactgaagatacaagctaaggtcgtcgtctcagcggctaagagctcgcagcagatatgcagcatcgtctatctatctatctatcaatcactctatctacgtctatttggagttctgatattggccatattattgttgcatgcatgcagtttgcctcacctgctgccgtcgaacctgggatgattacagaagctctccggaaagctatagcaagctag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0258700, RefSeq:Os11g0258700