BGIOSGA000828

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Revision as of 10:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000828| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000828, complete gene.| tag = P0481E1...")
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Gene Name

BGIOSGA000828

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000828, complete gene.

LocusTag

P0481E12.28-2

Ensembl Transcript ID

BGIOSGA000828-TA

Ensembl Protein ID

BGIOSGA000828-PA

Length

3172

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34516715..34519886

Sequence Coding Region

34519791..34519886,34519432..34519506,34519243..34519338,34518965..34519050,34518726..34518846
,34518067..34518146,34517916..34517978,34517708..34517826,34517498..34517583
,34517249..34517370,34516940..34517051,34516715..34516819

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34516715..34519886 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34516715..34519886 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACATCGCCGCCTGCGAGGGGCAAGCCGAGGTCGTCGAGCTGCTCCTCCAGCGTGGGGCGGATGCCGTCGCCGAGGACCAGTGGGGCAGCACGCCTTTGGCAGACGCATTGCATTACCAGAACCATGATGTGATCAAGATCTTGGAAAAGCATGGCTCCAAGCTTAAGATTGCTCCTATGCATGTTAAAAATGTCCGTGAGGTTCCTGAGTACGAGATTTCCCCGAACGAGCTAGATTTCACTAATGGAAATGGTATATCGAAGGGTACATTTAGGAAAGCAACATGGAGGGGCATTCTGGTTGCTGTTAAGAAGCTTGATGACGATCTAATTATGGACGAGAACAAAGTACAAGCATTCAGAGATGAGCTTGATGTGCTACAACTAATACGGCATCCGAATGTCGTGCAATTTTTAGGTGCTGTAACACAAAGCAGCCCAATGATGATTGTAATGGAATTTATGCCCAAGGGTGATTTGCGCAAGCACTTGAGTAGGAAAGGGGCTCTGGAACCGTCATATGCAGTGAAATTAGCTCTTGATATTGCAAGAGGGATGAATTATTTACATGAGCATAAACCTCAAGCTATCATCCACCGTGACCTTGAGCCTTCAAACATATTGAGGGATGACACTGGACATCTGAAGGTGGCAGATTTCGATCTGTGTAAGATGCTAAAATGGAGAAGAAAAGTTAGAGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAGGTATGTAGCTCCAGAAGTCCTGCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCAAGAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGCACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATTGAGAGAGTTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAACGATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGTGAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGGCAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAA</cdnaseq>

Protein Sequence

<aaseq>MHIAACEGQAEVVELLLQRGADAVAEDQWGSTPLADALHYQNHDVIKILEKHGSKLKIAPMHVKNVREVPEYEISPNELDFTNGNGISKGTFRKATWRGILVAVKKLDDDLIMDENKVQAFRDELDVLQLIRHPNVVQFLGAVTQSSPMMIVMEFMPKGDLRKHLSRKGALEPSYAVKLALDIARGMNYLHEHKPQAIIHRDLEPSNILRDDTGHLKVADFDLCKMLKWRRKVREEKAVTSPGNACRYVAPEVLRNEEYDTKVDVFSFALILQEMIEGCLPFYDKKNNEIEKAHNSKERPPFRAPPKHYAYGLRELIEQCWSENPASRPDFRTIIEQLSYIQNEISQRNRWKVKPLKCFLSFEGMWKKDRNEGSTTRSSRSSRSYF</aaseq>

Gene Sequence

<dnaseqindica>1..96#381..455#549..644#837..922#1041..1161#1741..1820#1909..1971#2061..2179#2304..2389#2517..2638#2836..2947#3068..3172#ATGCACATCGCCGCCTGCGAGGGGCAAGCCGAGGTCGTCGAGCTGCTCCTCCAGCGTGGGGCGGATGCCGTCGCCGAGGACCAGTGGGGCAGCACGGTGAGCCTCCCTGAACTTTGTTTTGTTTTGCTGCTATTGGTGATTTTATTGCTCTAGCTGAAAAACCTCATGATTACTCGGGGATAATCTGAGTTGAATTGGGAACTCCCATGGAATGGTATTAGATGCAAGTTTTATCCAGTAAGTACAATGATTGATTGACGCGAACATGGTCTTAGTCACCGAGGGAGATGGATTCGAGATAATACTTCTAATATATATGTTTATTTCTAGGTTGCTATTTTAATATGCGAGTGTTGTATCATTTGTCTACCATCTGGCAGCCTTTGGCAGACGCATTGCATTACCAGAACCATGATGTGATCAAGATCTTGGAAAAGCATGGCTCCAAGCTTAAGGTACTTCCGAACTATTATGTACGGGCATTTTGTCTTCCTGATGTACTGCTATGTTCAAGTTTTCTGAATTTATTTCCTTTTTTTTTTTTGAAGATTGCTCCTATGCATGTTAAAAATGTCCGTGAGGTTCCTGAGTACGAGATTTCCCCGAACGAGCTAGATTTCACTAATGGAAATGGTATATCGAAGGTGTGTATATATGAATATGTTAGCCTTTCTTTCTTATTTGAAATTTTCAGTTAGAGACACAATCTGCCAGTCACAATGTTTCTAATTTGTTGACTTGCTGACCCCTACTTTCTGTACATAATTTTAAATATGTTAGGTTGCTCCATCAATTTTCGTCAATTATGTTTTATATCATTTTCATCTGTTTCTCAGGGTACATTTAGGAAAGCAACATGGAGGGGCATTCTGGTTGCTGTTAAGAAGCTTGATGACGATCTAATTATGGACGAGAACAAAGTGTGGGTTGGTTCCATTGAGTAGTATTCAGTTACTGTTTTACTCGTCTTTTTTCACTTAATTGTAGACTCCGTCTGAAAAATGTAGTTCCCTGACAGATTAGATTGGTTTGCATTGCAGACAAGCATTCAGAGATGAGCTTGATGTGCTACAACTAATACGGCATCCGAATGTCGTGCAATTTTTAGGTGCTGTAACACAAAGCAGCCCAATGATGATTGTAATGGAATTTATGCCCAAGGTTTGTCCTATAGGCAGCGCTTTTTTAAATTTGCATTATTCACATATCTGATCATCTTTAGATCTGAGACCTATTTGATAAACTGCAATAGGAGCTGCTGCTTTAGATGAACTTTTCTAGTTACCTGGTCATTCATAGTTCTGAGTGATAAAATGTTGTTGCCATTCTCAAGTGGCAATGCCAGATCTGTTTTTCCTTGTCTTAGCTGTTGCTTTTCTTTTGTTGGAAATATTTGGCCAACTGGTAATGCCAATTTAGCCTTCACTCTTTCCTTCTAGCTGCTAATATTTGGTTGCAAGCACAATAGATCAGTGCAAGCTGGATATATGTGTACCGAGCTTAACTTTGCTGTTTTGGTCCACCAAAATATGTTCATAGACTAGATGGACTTTTCCCTAACTACTTTCTGTTTCTAGCTTTTTTAGAAGGTGAGCCCCACTACAAAGACAGATCACTAGCTTTGTTAACTTCCTATTAGTATTCTGTTAATGTCAAATGGTTCATGACTATGCATGCACTTGAGTATGAAAACACCTTTTTTTAGTGAACTGATGAGAACTTTGGAATTTTTGTTCTCAGGGTGATTTGCGCAAGCACTTGAGTAGGAAAGGGGCTCTGGAACCGTCATATGCAGTGAAATTAGCTCTTGATATTGCAAGGTTCGCCTATCATGACCTGAATCTCTTGGTTCTACTTTTTTGTTGCTATAATGAAGACTGATTTGCAGTTCTCTCTGAAATCTAATAGAGGGATGAATTATTTACATGAGCATAAACCTCAAGCTATCATCCACCGTGACCTTGAGCCTTCGTGAGTACTACTTTTATTTTATTTCTAGACCAGATGCTTTGAATACATGATTTGTAAAGGCTTCTTCTATCCATTGTGTAAGACAACAGAAACATATTGAGGGATGACACTGGACATCTGAAGGTGGCAGATTTCGATCTGTGTAAGATGCTAAAATGGAGAAGAAAAGTTAGAGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAAGAAAATTCATACTGAATTTGAGCTATATATTAGTATCCATCTTACTGTTCCAAAATATCATCACTTACATTTGTTTACCTTCTTTCTGCACTGATAATTGGCATGACAAATATGTTGCAGGTAGGTATGTAGCTCCAGAAGTCCTGCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCAAGAGGTAAAAGTGTTGCTATGCAACATTCTGTATTCCTGTGCCACTATGAACTGTAAAGTAAAACTGCTGAACCTACTCCCAGAGCCCCCTAGAAGACCAGTTTTTGTACTGATATTCCAAACATTTTCAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGCACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATTGAGAGAGTAAGCATTCCTTCTTTTGTTTTGCCTGTGGTAACTACTAAATTGTTTGGAGCACTATTATGACATATTTTCCATTGCAATCTTCTTGCGTACAAGCTTCCGCAATCTGTGTTCCATTTGCCTATCTGGAACTTTGAACTTTTATGTGCCACTATTTCACCCTGAACTGACCACTTTTCTGCTGCACACTATGATAGGTTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAACGATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGTAGCGGCTAATGTCTTTCCTGCTGTATTGCAATGGTCTTCTGAACATTCTGTCATAGTAATAGAGAAATTGTTCAAGTAACAGATTGATTTACTTTGGCTGTGCCCTTGTCTTGAACAGGTGAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGGCAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000828