BGIOSGA000836

From RiceWiki
Revision as of 10:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000836| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000836, complete gene.| tag = P0481E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000836

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000836, complete gene.

LocusTag

P0481E12.9

Ensembl Transcript ID

BGIOSGA000836-TA

Ensembl Protein ID

BGIOSGA000836-PA

Length

3007

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34457764..34460770

Sequence Coding Region

34459595..34460770,34458631..34459086,34457764..34458045

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34457764..34460770 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34457764..34460770 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGAGGAGGATTACTCGTGGGTTCGGCGGACAAGGTTCTCCCACTCCGTCGTCCGCTCCAAGTCCGGCAGGGAGCAGTTCGGTGCATTCGTCGAGCAGTTCAACCGCGGCGCGGCACGGAGGCAGAGAGGGCCCGGTTCAGGGTTCATGCTCCATGGCCTCAACTTGGAACCGAGGGCGAGGCTCCCAGCCACCACCTCGGCGAATTCCTCCGTTCCGAGGACGACAGGATCGTCGAATGCTCAGCCATCGTCGGAGACGAAGCCAGCTTCGTCGTCCTCGGACGCCAAACCGGAGCAGCACGAGAAGAGCCTCAACTTGGAACCAAGGACGAGGCTTTCGGCCACCACCTCAGCGAATTCCTCTGTTCCGTGGACGACAGGATCGTCGAATGCCCAGCCGTTGTCAGAGACAAAGACAGCTTCGTCCTCCTCGGACGCCAAACCGGAGCAGCAAGAGAAGCCTCGTGATCATCAGCCGTCGCAAGAAGTGTCCACCAAGCAGGATGATAAGGCTGAAAATGACACGCAGGCAACAGCCACATCTGGGCCTCTCGAGTTCTCCTTCCATCCTGATGAGCAAACCTTGAGGCTGCAGAGGGCGTGTTCTAGCCCTGTTCCTTTCCCAAGCAACAAGAACATGCTGGTGGCTGATGCTGCAGCACGTAGCTCATCTCTCAAGGTTGCCGGCGAGGGGCCGAAGCCGAAGCCGAAGCAGAGAGCAAGGTCCCCTCCCCTGCGTCGTGACGTTCCTGAGCTGTTCAAGGAGGCCAAATCGTCAAGCAAGAGGTTTTCCACACCGCCACCGCGCCGGAAGCCTTCGTCTCCACCGGCGCCGAGCAGGAGCCCTCCTCATGCCTTTGCCACGGCGAGAGCGCATGGCAAGCCGAAGCATAAGAAGGATTCCTCTGCCAATGGAAGGGCGAAGGTCGCCGCACTTGAGGTGCTCGAGAAATGGACCGTCGATCGCTCGCAGCTGCTCATCGGGCACAGGTTCGCCTCCGGGGCGCACAGTCGCTTGTTCCATGGAATCTACAAGGAGCAGCCTGTCGCCGTGAAGTTCATCAGGCAACCTGAGGATGAGGAAGATGCAGAGCTGGCCGCGCAGCTTGAAAAGCAGTTCAACACGGAGGTCACCACACTGTCCCGCCTGAACCATCCTAATGTCATTAAGCTGATTGGAGCATGCAGTAGCCCACCTGTCTTTTGTGTCATCACCGAGTTTCTTTCTGGGGGTTCTTTAAGAACATTTCTGCACAAGCAGGAGCACAAATCTCTACCTTTAGAGAAGATCATTTCAATTGGTTTGGATATTGCAAATGGCATTGGATATATTCACTCACAAGGAGTTGTTCATCGTGATGTGAAACCAGAGAACATCATATTTGATTCAGAATTTTGTGCGAAGATTGTTGATTTTGGAATATCTTGTGAAGAAGCAGAGTGTGACCCTCTGGCGAATGACACTGGGACTTTCAGATGGATGGCTCCAGAGATGATGAAGCACAAACCTTATGGTCGAAAGGTTGATGTTTACAGCTTTGGCCTTATCTTATGGGAAATGTTTACCGGGTCGGTACCTTATGAAGACTTGAATCCATTCCAGGCAGCTTTTGCTGTTTTTGATAAGAACGAGAGGCCGGTCATCCCCAGTAGCTGCCCTGCGCCACTACGGCTTCTAATTGAGCAATGTTGGGCCTCGCAACCAGATAAAAGGCCTGAATTCTGGCAAATAGTACAGATATTGGACAAGTTTAAGGCGGTTCTTGATAAAGATGGAACACTGGACAATATGCCATGCTTAAACTTGCAAGGAACTCATGATCACAAGAATTGGCTAGCTCACTGGGTCCAGAAGCTCAAACATACCCATCATGATCTCTCTGGACCTCCGCCACCAAAATTGCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MDEEDYSWVRRTRFSHSVVRSKSGREQFGAFVEQFNRGAARRQRGPGSGFMLHGLNLEPRARLPATTSANSSVPRTTGSSNAQPSSETKPASSSSDAKPEQHEKSLNLEPRTRLSATTSANSSVPWTTGSSNAQPLSETKTASSSSDAKPEQQEKPRDHQPSQEVSTKQDDKAENDTQATATSGPLEFSFHPDEQTLRLQRACSSPVPFPSNKNMLVADAAARSSSLKVAGEGPKPKPKQRARSPPLRRDVPELFKEAKSSSKRFSTPPPRRKPSSPPAPSRSPPHAFATARAHGKPKHKKDSSANGRAKVAALEVLEKWTVDRSQLLIGHRFASGAHSRLFHGIYKEQPVAVKFIRQPEDEEDAELAAQLEKQFNTEVTTLSRLNHPNVIKLIGACSSPPVFCVITEFLSGGSLRTFLHKQEHKSLPLEKIISIGLDIANGIGYIHSQGVVHRDVKPENIIFDSEFCAKIVDFGISCEEAECDPLANDTGTFRWMAPEMMKHKPYGRKVDVYSFGLILWEMFTGSVPYEDLNPFQAAFAVFDKNERPVIPSSCPAPLRLLIEQCWASQPDKRPEFWQIVQILDKFKAVLDKDGTLDNMPCLNLQGTHDHKNWLAHWVQKLKHTHHDLSGPPPPKLL</aaseq>

Gene Sequence

<dnaseqindica>1..1176#1685..2140#2726..3007#ATGGACGAGGAGGATTACTCGTGGGTTCGGCGGACAAGGTTCTCCCACTCCGTCGTCCGCTCCAAGTCCGGCAGGGAGCAGTTCGGTGCATTCGTCGAGCAGTTCAACCGCGGCGCGGCACGGAGGCAGAGAGGGCCCGGTTCAGGGTTCATGCTCCATGGCCTCAACTTGGAACCGAGGGCGAGGCTCCCAGCCACCACCTCGGCGAATTCCTCCGTTCCGAGGACGACAGGATCGTCGAATGCTCAGCCATCGTCGGAGACGAAGCCAGCTTCGTCGTCCTCGGACGCCAAACCGGAGCAGCACGAGAAGAGCCTCAACTTGGAACCAAGGACGAGGCTTTCGGCCACCACCTCAGCGAATTCCTCTGTTCCGTGGACGACAGGATCGTCGAATGCCCAGCCGTTGTCAGAGACAAAGACAGCTTCGTCCTCCTCGGACGCCAAACCGGAGCAGCAAGAGAAGCCTCGTGATCATCAGCCGTCGCAAGAAGTGTCCACCAAGCAGGATGATAAGGCTGAAAATGACACGCAGGCAACAGCCACATCTGGGCCTCTCGAGTTCTCCTTCCATCCTGATGAGCAAACCTTGAGGCTGCAGAGGGCGTGTTCTAGCCCTGTTCCTTTCCCAAGCAACAAGAACATGCTGGTGGCTGATGCTGCAGCACGTAGCTCATCTCTCAAGGTTGCCGGCGAGGGGCCGAAGCCGAAGCCGAAGCAGAGAGCAAGGTCCCCTCCCCTGCGTCGTGACGTTCCTGAGCTGTTCAAGGAGGCCAAATCGTCAAGCAAGAGGTTTTCCACACCGCCACCGCGCCGGAAGCCTTCGTCTCCACCGGCGCCGAGCAGGAGCCCTCCTCATGCCTTTGCCACGGCGAGAGCGCATGGCAAGCCGAAGCATAAGAAGGATTCCTCTGCCAATGGAAGGGCGAAGGTCGCCGCACTTGAGGTGCTCGAGAAATGGACCGTCGATCGCTCGCAGCTGCTCATCGGGCACAGGTTCGCCTCCGGGGCGCACAGTCGCTTGTTCCATGGAATCTACAAGGAGCAGCCTGTCGCCGTGAAGTTCATCAGGCAACCTGAGGATGAGGAAGATGCAGAGCTGGCCGCGCAGCTTGAAAAGCAGTTCAACACGGAGGTCACCACACTGTCCCGCCTGAACCATCCTAATGTCATTAAGGTAACCTCATGAATTTCGATTACGCCTGTTTCAATTCTGGAGTGGTTGTGGATTAGCATGAACTTCCGAGGAATTGCTTGTAGTTAGCACTGTTCTATTGACTTATGCTGTACTTTTTCGAGCTATTTTATTTGGGAGTATTTGCGCTTAGATTCTATTTGGATCAACTAGCAAGCATGCTAGACAAGATATGCAAGATATAAATTATATACGAAGAGAAATTATTTAATTGACCTGTAAGGCTGTAATTCGTGGCTTATGTATTTCCTAGACAGCGTAGCTAGCTTCTGCAGTTCCTCCAGCTGAGTTGGAGTACTTTCCTTTTTACCCCGAAGGGCAAGTATTAGTAGCTTACCTAGGAGAGTTGGTCATGCACTCATGCATACTGAATGTAGTATATGGCATTTAATAGTTGTCCCTAATAGAGTAATAGTAAATATTGTGTGATTTATGTGTGCACTAAAAGATAAACGTTACTGTATTCATTATCGCTGTTTTGTCCATGTAGCTGATTGGAGCATGCAGTAGCCCACCTGTCTTTTGTGTCATCACCGAGTTTCTTTCTGGGGGTTCTTTAAGAACATTTCTGCACAAGCAGGAGCACAAATCTCTACCTTTAGAGAAGATCATTTCAATTGGTTTGGATATTGCAAATGGCATTGGATATATTCACTCACAAGGAGTTGTTCATCGTGATGTGAAACCAGAGAACATCATATTTGATTCAGAATTTTGTGCGAAGATTGTTGATTTTGGAATATCTTGTGAAGAAGCAGAGTGTGACCCTCTGGCGAATGACACTGGGACTTTCAGATGGATGGCTCCAGAGATGATGAAGCACAAACCTTATGGTCGAAAGGTTGATGTTTACAGCTTTGGCCTTATCTTATGGGAAATGTTTACCGGGTCGGTACCTTATGAAGACTTGAATCCATTCCAGGCAGCTTTTGCTGTTTTTGATAAGGTATGAATTTGTTTTCCTGTTCTTATCTGCATACTGCATGAGGAGCTTTTGCTGTTTTTGATAAGGTAATACATGTTCAGTTGCTTGATTATCGTCTCTTCAAAACGAAGAATCATTGCATAAGATAAAACATGTTGAGTCGTTTCTAGTTAGTCGGCCTGGTTTAGTTCCCAACTTTTCCATCACATCAAAACTTTCCTACACATAAACTTTCAACTTTTGCGTCAAATCGTTCCAATTTCAATTAAACTTTCAATTTTAGCGTGAACTAAACACACCCTAACTGTAACTGTTGACTACGACCATCTCACTTTGATCACAAATTACTTTTAAATGATAATACTATGATGTGTGAAAGTTTTATGGTTATATTTATGATATTTCAAGCTTCGATAAACATGACATATTTGCACGTATCTATAATTTGTTTGCAAAAAAAAGAGAAGCGGTCAAAGTTTAAACATAAATAGTAACAATGCCAATTATTTGAAAACAGATGAAGTAACAACCAAATATATCTTCAGTTCCATGATCCTATGGCTATTTGATTTTCTTTTGGAAAATGACGAAAACTCCATTTTTCAGAACGAGAGGCCGGTCATCCCCAGTAGCTGCCCTGCGCCACTACGGCTTCTAATTGAGCAATGTTGGGCCTCGCAACCAGATAAAAGGCCTGAATTCTGGCAAATAGTACAGATATTGGACAAGTTTAAGGCGGTTCTTGATAAAGATGGAACACTGGACAATATGCCATGCTTAAACTTGCAAGGAACTCATGATCACAAGAATTGGCTAGCTCACTGGGTCCAGAAGCTCAAACATACCCATCATGATCTCTCTGGACCTCCGCCACCAAAATTGCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000836