BGIOSGA000858

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Revision as of 10:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000858| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000858, complete gene.| tag = P0638D1...")
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Gene Name

BGIOSGA000858

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000858, complete gene.

LocusTag

P0638D12.13

Ensembl Transcript ID

BGIOSGA000858-TA

Ensembl Protein ID

BGIOSGA000858-PA

Length

6457

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34037992..34044448

Sequence Coding Region

34044254..34044448,34041949..34042170,34041557..34041853,34041307..34041474,34041056..34041223
,34040894..34040974,34040680..34040746,34040488..34040585,34039467..34039539
,34039314..34039384,34039177..34039226,34038276..34038388,34037992..34038080

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34037992..34044448 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34037992..34044448 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTTCCTCAACCTTGTGGGCAACTCCTTTGGGTGCTCGGCTTCCGGCGAGCGGCTCGTCTCGGCGGCCAGGGACGGCGACCTGCAGGAGGCGCGCGCGCTGCTCGAGTACAACCCGCGGCTCGCCTGGTACTCCACTTTCGGCGGCCGCAACTCGCCGCTGCACTACACCGCCGCGCAGGGTCACCATGAGAGATACAGTTCTAGTAGGTTTGCTAGTACAAGTGTTGTGAAGCAGTCTTCAGGTGGTTTGTTTAGCTGGCTTCTTGGGGAGAAGTCAAGCCAATTGCCTCCTCTTGATGTCCCTCTCCCGGGTATTACCCTTCCTCCACCACTGCCAGACTTTGTTGAACCGTCTAAGACAAAAGTCACCACTCTCCCGAATGGCATCAAGATTGCTTCAGAAACGTCAGTGAGTCCAGCAGCATCTGTGGGACTGTATATTGACTGTGGTTCAATATATGAAACACCTGCTTCATCTGGAGCATCACATCTGTTGGAGAGAATGGCGTTCAAGAGCACTACAAACAGGAGTCATTTGCGGCTAGTACGTGAAGTAGAAGCCATTGGAGGGAATGTCTCTGCATCAGCCTCTCGTGAACAAATGTGCTATACCTATGATGCATTCAAGGCCTATGTACCTGAGATGGTTGAAGTGCTTATTGATAGTGTGAGGAACCCAGCCTTTTTTAACTGGGAGATTAAAGAGCAGCTGGAGAAGATCAAGGCTGAAATAGCTGAAGTTTCTGATAATCCTCAAGGTTTACTTCTAGAGGCACTCCATTCTGCTGGCTATTCTGGGGCACTGGCGAAGCCCCTAATGGCACCTCAGTCCGCTATTCATAGGTTGGACAGTAGTATCCTTGAGGAATTCATTGCTGAAAATTACACAGCACCTAGGATGGTCCTTGCGGCATCTGGAGTTGATCATGATGATCTAGTTTCAATTGCTGAGCCACTTCTGTCGGATCTTCCCAGTGTGAAGCGTCCAGAAGAGCCAAAATCAGTTTATGTGGGAGGAGACTATCGTTGTCAAGCGGACTCTGACAAGACACATATTGCTCTTGCTTTTGAGGTACCAGGTGGATGGTTTGAAGAGAAAACTGCCATCATTGTTACTGTTCTTCAGATGCTCATGGGAGGAGGTGGTTCTTTCTCTGCTGGTGGTCCTGGGAAGGGCATGCATTCTCGATTGTATCTCCGGATATTAAACAACTACCATCAGATCGAGTCATTCTCTGCATTCAACAGTATCTACAACCATTCAGGTCTTTTTGGAATTCATGCAACAACTAGCCCAAATTTTGCTTCCAAGGCTGTGGATTTGGCAGCAGGAGAGCTTCTTGAGGTTGCAACTCCTGGAAAAGTTACACAAGAACAGCTTGATCGAGCTAAACAGGCAACCAAGTCTGCAGTTTTGATGAACTTGGAATCCAGAGTCGTAGCATCTGAAGACATAGGGAGGCAGATTTTGACGTATGGGGAAAGGAAACCCATTGAGCATTTCTTGAAAGATCTTGAAGCAATCACCTTGAATGACATTTCTTCTACTGCCAAGAAGATCATTTCATCACCCCTTACACTGGCATCATGGGGTGACGTTATTCATGTCCCGAGCTATGAATCTGTTAGCCAGAAGTTTTTCTCACGAGTGCGCAAGCCTATCTCATGGCTTGCCCCCGACTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MGFLNLVGNSFGCSASGERLVSAARDGDLQEARALLEYNPRLAWYSTFGGRNSPLHYTAAQGHHERYSSSRFASTSVVKQSSGGLFSWLLGEKSSQLPPLDVPLPGITLPPPLPDFVEPSKTKVTTLPNGIKIASETSVSPAASVGLYIDCGSIYETPASSGASHLLERMAFKSTTNRSHLRLVREVEAIGGNVSASASREQMCYTYDAFKAYVPEMVEVLIDSVRNPAFFNWEIKEQLEKIKAEIAEVSDNPQGLLLEALHSAGYSGALAKPLMAPQSAIHRLDSSILEEFIAENYTAPRMVLAASGVDHDDLVSIAEPLLSDLPSVKRPEEPKSVYVGGDYRCQADSDKTHIALAFEVPGGWFEEKTAIIVTVLQMLMGGGGSFSAGGPGKGMHSRLYLRILNNYHQIESFSAFNSIYNHSGLFGIHATTSPNFASKAVDLAAGELLEVATPGKVTQEQLDRAKQATKSAVLMNLESRVVASEDIGRQILTYGERKPIEHFLKDLEAITLNDISSTAKKIISSPLTLASWGDVIHVPSYESVSQKFFSRVRKPISWLAPDF</aaseq>

Gene Sequence

<dnaseqindica>1..195#2279..2500#2596..2892#2975..3142#3226..3393#3475..3555#3703..3769#3864..3961#4910..4982#5065..5135#5223..5272#6061..6173#6369..6457#ATGGGGTTCCTCAACCTTGTGGGCAACTCCTTTGGGTGCTCGGCTTCCGGCGAGCGGCTCGTCTCGGCGGCCAGGGACGGCGACCTGCAGGAGGCGCGCGCGCTGCTCGAGTACAACCCGCGGCTCGCCTGGTACTCCACTTTCGGCGGCCGCAACTCGCCGCTGCACTACACCGCCGCGCAGGGTCACCATGAGGTGATGCCATTTGTTTGCCAAACTAGCTGAAGTATCAGTGTTTCTGTATAGATGGGTAAAAGAACTGCAATACTGCATTCACATTTTCTGTTGCTTGCATGTTCAAATTGTTTCTCTGTTGCTCGAATCCGACGTCAAGATCAACCTCAGGAATTACAGGGGCCAGGTAAACCAAGATTTCTGGTACATTTAATTGTTTAAGTTTCGACAAGGGGTGGGTGATGCCATGGGAGGGCGAGAGGAGGCGGCGTGGACTGGGGCGAAGGACGGCGGCCGCACAGGAGGACATGTGGGGAGAGGGAGATGACTTGTGGGGCCGGATGTAGGTGGCGACATCGGTGTCGGAGTGGCCATCAAAAACGGCGAAGAGGCCGACCTCGTTGTCATCCTAATCTAGTGTGGCGAAACTCGGGGGCGACCTCCTCCTCCTCTGGGCACCGCCGCCGCCGCCGCCCGCGCCCTGCCGCCGCCGCCGCCGCCGCCGCCGCCACTCCGCCCGCCCCTCCGCTCCTCGTGGGCTCCTTCGCCCGCGGCCTGCCGCAGCCGCCGCTCCGTCGGTATGCTTCGGCCGCTGTCGTCGTCGTCGGCATGCTGCGGCGTGATGAGCAAGAAGAGGGAGAGCCGAGTGGGGAGAGGGAGATGACATGTGGGGCCCACGGGCCTCACCATATTATTTTTGTAGCTAACATATGGGCCCCATCATTTTTAGATTTTTTTGTGTGGTTGATATGTGGGCCCATGATTTTTATTATTTTTCCGAGATATAATTGCCACGTCATCGCTACATCAATGCCACGTGAGACGGAGACCTAGTCAAATGGCGCCACATCAGCTAAAACCGCCGTCGGTTTTATTATCTGGTTTTGGGACCGGTTGTATCTGGTTTTGGGGTTTAAGGGCGAAAATTGGATTCGTTGTAAAATTAAGGGACCTCGGATGAACTTATTCCTTCGGCCTATGATTCTATGGAAGCCCGCCATGACCAAGCCCACAAAACCAGAGCCTTCCCATTCCCACAAAACCTACTCACAGTTCGGATCCGACCACTCCACGTCTCCACCCGGCCGAGCTCAACCTCCGCGCCGCACCGGACGGTCGCACCCGCGTCTCCCACCTCCCCGGCGGCGGCTCCCCTCATCTCCGCCGGTCGCCTCCTCCAAGCCTCCGCGACGCGCACGGCAGAGATGTACCGCATCGCCGGGAGCCACCTGCGCTCTCTCAAGGTACCGCACCCTCCCATCCCGATCCTTCCCGCTGCAAAACCCCCCATCCGATTCGCCCGACGCGGGGGGCGTTCCGTGTAGGAATTGATGGTGATTGTGGCTAATCCTTGTTTACTTAGTCAGATGTTGAAACGGGAGATAGATTGTTTGTTGTCCCACGATGAGAAGAAGAAACCTGCATCCCGATACATTTAGCGGTCACTGATTCTCTCTAGCACTTACCGTTTTCCTGTTAAATTTATTCAGATAACGCAGCTGAAGTCCTGTAAATCCTTTAACCAACATTTTTCGTGACGGTGCGGGATGCTATGTTGAATGCACGGACGCCACATTTTCTTTTGCCTATTGCATTATATTATTTTGACTTTTTAAGCTGTTTTCTTTGCTTGTCTGATCTGTCTAGAAGTGTTGGGTTGATGAGTTATCGCTAACTCAATACACATAGTGCTTATATCATCTTTTCAGATTGATAATGTTAATACGATATTTTGAGTTTTTTTGGGTAAGGTTCACCTGAATGTTTAAAACAACTATTTTAATGTAACTATTATACTGCAATTTGATTCCAAAGGGAAAGGGTGATGTATGACAGTATAAGTTAAGCTGCAAAGTTTACTTCTCGAAGATTTCTTTTCGCAATATGATCTTGCTAGTTTGGTTTTTCAGTGACCACTGCCTCCAGTATTTTCTGTAATTTGTATAGAATTTTTTTCATGTGCAAGTTTTTCAGTTTGAGTACCTTCTTACTTCTAAGTAATTTCACCTCATGTTGTTTCTGCCACATTATTTGTTTTCCTTTATTTCCATAAAACCATATCATGTATCATAAAGACGCATCTCTTTTGCTTATGTGGTTGCAGAGATACAGTTCTAGTAGGTTTGCTAGTACAAGTGTTGTGAAGCAGTCTTCAGGTGGTTTGTTTAGCTGGCTTCTTGGGGAGAAGTCAAGCCAATTGCCTCCTCTTGATGTCCCTCTCCCGGGTATTACCCTTCCTCCACCACTGCCAGACTTTGTTGAACCGTCTAAGACAAAAGTCACCACTCTCCCGAATGGCATCAAGATTGCTTCAGAAACGTCAGTGGTATGATGGTATCACTATATGCCTTCAGGTGTTTTAATAGATTCTCTTTTTTCTGCATCAGCATGAAAAGTAAATTTTTTAGGACTTATCTGCAGAGTCCAGCAGCATCTGTGGGACTGTATATTGACTGTGGTTCAATATATGAAACACCTGCTTCATCTGGAGCATCACATCTGTTGGAGAGAATGGCGTTCAAGAGCACTACAAACAGGAGTCATTTGCGGCTAGTACGTGAAGTAGAAGCCATTGGAGGGAATGTCTCTGCATCAGCCTCTCGTGAACAAATGTGCTATACCTATGATGCATTCAAGGCCTATGTACCTGAGATGGTTGAAGTGCTTATTGATAGTGTGAGGAACCCAGCCTTTTTTAACTGGGAGATTAAAGAGCAGGTATTCTGTCATTCCGAAATTAGCATTTTTGATATTCTGTATATGTTGGCATTATAATAATGATGTCTTGTTCCCCCTACAGCTGGAGAAGATCAAGGCTGAAATAGCTGAAGTTTCTGATAATCCTCAAGGTTTACTTCTAGAGGCACTCCATTCTGCTGGCTATTCTGGGGCACTGGCGAAGCCCCTAATGGCACCTCAGTCCGCTATTCATAGGTTGGACAGTAGTATCCTTGAGGAATTCATTGCTGTAAGATTCATCAACTTGCCATTTATATTGTTTTTTTGTTAGAAAGTGCGTGCTTTGACATATGCTTGCATTGATGAATTCAGGAAAATTACACAGCACCTAGGATGGTCCTTGCGGCATCTGGAGTTGATCATGATGATCTAGTTTCAATTGCTGAGCCACTTCTGTCGGATCTTCCCAGTGTGAAGCGTCCAGAAGAGCCAAAATCAGTTTATGTGGGAGGAGACTATCGTTGTCAAGCGGACTCTGACGTGAGCTTTTGCTGCTTTACGCTGTTTGTTGATGAGGATGTGTATATGTACTTATAATCCTGGCTTCCTTTTCATGAACAGAAGACACATATTGCTCTTGCTTTTGAGGTACCAGGTGGATGGTTTGAAGAGAAAACTGCCATCATTGTTACTGTTCTTCAGGTATTGTTGGCAAACATCAAATTTAACCATTATTCAGAGACAAAACTCAACTATGGTATACCTTTTATGTAGTTTACCGTCTAGTAGACTGCCTTATATGTTCACCATTTCTTTATACACAATATGGATGGTCTTGTTATTTTGCAGATGCTCATGGGAGGAGGTGGTTCTTTCTCTGCTGGTGGTCCTGGGAAGGGCATGCATTCTCGATTGTGTATGTTGAATTCCACATTCTTGTCAATGTTTCAAAAAATTAAGTTGACTTCTTGTGCCAATTTCTTAACATTAGCGTGATGCTTTATTTACAGATCTCCGGATATTAAACAACTACCATCAGATCGAGTCATTCTCTGCATTCAACAGTATCTACAACCATTCAGGTCTTTTTGGAATTCATGCAACAACTGTGAGCCCCTTATCAGACATGGATGATCCTGCTTTTTTTTTTTTGCCAAATTCAAGAAGTAAATGTAGTTTAGTGTCTGTCTTTTTATACCAAATGGAATAGCCTACTCTAGTAGTTATTATAATGTCCATTATGTGTATATCTGGTCAGTGGTGAACCCAGAACAAAAATTGCCGGGGGTCCAATACATTATTACTTAATTATTGACTGATTTAATAGTTTAGGACATAATTTAGTTAGGATTGAATAATCTATCTGGGGTCCTGTGACCCTGGGAAGCTCAACATAGGCACTCCATTGTATTTGGTAGTTGATTTGTGTGCACAACCAACCTGGTCTCTTTTATCCTTTCTGCTTCTGGGATTTACACACCATCTTACGCATGGAATAACTTGATTGCATGAGGCCTGTGATGAAACCGGGCAAAGCAGCCAGTGACCTTTGTAACCAAAATAGAGAGGTCAAAAGTTCCTTAAGTAGGTGAAGAGGGAGAATTTTAGTGCCTTTATTACGGATATAATAGAAGCTAGAAGCAACCAATACTTTTGTGGGATGTGTGGAAAGCATCCATCTGGAACTGTGAGAAGTATTGTTTGCATACTTCTCTGTTTAGCAGGGTATATGGCAAATGGGCACATCGCCTGCTCTACTCATTTGTTTTGAGATGTTTGTTATGCATTCTACCTTCACTCCATATCTCCTATCACTATATTGTACAACAATTTGTACCATTTTTTTCCTCTTTCTAGTTTTCCTTGGAAATGAAACTGTGCAAAGGGAGTGAGAAGATTGACTAAAGCCTTGTAGAGACATCAATTTGCATCCATTTCTTTCTTTTCATTTTGTTGTGTTCATTGTGCTATTAAATGATAGAATCACTTGTCAGTAACACTTTTTGCTACTCCTTTCATTATATATAATTGACACAGCTTTATGTCTTGCAATCAGAGCCCAAATTTTGCTTCCAAGGCTGTGGATTTGGCAGCAGGAGAGCTTCTTGAGGTTGCAACTCCTGGAAAAGGTTTGCTTCTTATTTGACATATTGGATATTTATAAGGACCATGCCCATATATATTTTCCTCATGGCTGTATTTTTTGTGTAGTTACACAAGAACAGCTTGATCGAGCTAAACAGGCAACCAAGTCTGCAGTTTTGATGAACTTGGAATCCAGAGTATGCATTTCTAACCACTACTTGAATCCTTTGTGCTTATCTTTTGTTTCCTGTTGTATCCTTGACACTTTGTTTTCTTCACTGCAGGTCGTAGCATCTGAAGACATAGGGAGGCAGATTTTGACGTATGGGGAAAGGTATGGTTGCACCAGCATTGGTAACATAGCAACAAAAGTCACCTCACATGGTTCTTAAACCTTTATGTGCACTAGCCATGCATTCACTATCATTTATGAGCTATGATTGTGCAATCATGCTGTGTCCTGACAATTTTAAGAACGGGAACTTTAGCATGTCATTAAAATCATAGTGAAACCTACAAATATATGTTGTCTATTGAGATGTCACCTTCAGTATTTACACAAGCATAGAGCTTTGATCCTTCAACTGTGAATGAACTACAACAGTTTGCTTTTTGTGTAGAGTGTTCGTTTTTTGTTGTGAACATACATGCTAAGTTCATTCTAGTTTTAACATGCATTACTATTGACATTTCTCTATATACTACTATGAAGAGGGAGTATGTCCGTTTACTTGGAACTCGGAAAATCCAGTTTGAATAAACTAATCTGTATAGCCGCCTGTGCACCGCCTTGCTGATGTAATGACATCCTGCCAATGTATAGCACTCCGAGCAATTGAACAAGATGATTCCTCTCCTTAGCCCCTCTCAATGTCGATCTTCTATAATTACTACAATAGTAATGTATGTTTTATATCCCATTGAATGGCATGGGGCTGGGCAATACAAATAGACCGCCGGATGTCTATATAACCGTAGTTGCATCAACTATTGCGGAATGAGGATTGCCAACAATTTTCTGTTAGCTAGTCAGTGGTCATCACTATTATGGCAATAGACCATCGTTCAGCTTTTTACCCTTAGTTGTGAATCTCTAACTATTCAGCTTTGTTGGGATCGCAGGAAACCCATTGAGCATTTCTTGAAAGATCTTGAAGCAATCACCTTGAATGACATTTCTTCTACTGCCAAGAAGATCATTTCATCACCCCTTACACTGGCATCATGGGGTGACGGTATGTTCTAACTTAATCTTCATCGAAGTATTTCCTTGTGAGGATTATGTAATACTCCCTCCAGTTTTTTTTTATATGACGTTGGCTAGTTCAAATTTGAACTAGTCAGCGTTATACATTTAAAGATGGAGGCAGTACTACCTTTTATAAACTAATAATTTTGGACTTGTGATTCACTAGAATGCTTTCTTGCAGTTATTCATGTCCCGAGCTATGAATCTGTTAGCCAGAAGTTTTTCTCACGAGTGCGCAAGCCTATCTCATGGCTTGCCCCCGACTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000858

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000858&oldid=38582"