BGIOSGA000871

From RiceWiki
Revision as of 10:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000871| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000871, complete gene.| tag = P0435H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000871

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000871, complete gene.

LocusTag

P0435H01.32

Ensembl Transcript ID

BGIOSGA000871-TA

Ensembl Protein ID

BGIOSGA000871-PA

Length

5119

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33730477..33735595

Sequence Coding Region

33735562..33735595,33732202..33732324,33731535..33731654,33730477..33730541

Genome Context

<gbrowseImage1> name=IndicaChromosome01:33730477..33735595 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:33730477..33735595 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTGCGCCGGATCCACACCTAAAACCGATGATAACAGCAAGAAGCTGAAAAAGCCCAAGCCTTGGAAGCACAATCAAGCAATAACAACAACACAACTCAAACAGATGCGTGATGAATTCTGGGACACTGCTCCACATTATGGTGGGCAGAAAGAGATTTGGGATGCGCTTCGAGCTGCTGCAGAAGCTGAGTTATCTCTTGCACAAACGATAGTGGACAGTGCCGGAATCATTGTATCAAATTCTGACATGACAATTTGCTACGATGAAAGAGGTGCCAAATATGAATTACCAAAGTATGTTCTGAGTGAGCCAACAAATTTGATCAGGGAAGGCTAA</cdnaseq>

Protein Sequence

<aaseq>MGCAGSTPKTDDNSKKLKKPKPWKHNQAITTTQLKQMRDEFWDTAPHYGGQKEIWDALRAAAEAELSLAQTIVDSAGIIVSNSDMTICYDERGAKYELPKYVLSEPTNLIREG</aaseq>

Gene Sequence

<dnaseqindica>1..34#3272..3394#3942..4061#5055..5119#ATGGGTTGCGCCGGATCCACACCTAAAACCGATGGTATCGTCGTTTTCCCTGTCTTTCTCGGTTTTTTGCTATCCGTGTTTTCGTTTTCGTTTTCGTTTTCTGGAATCTTAGATTGAGATCTTGGTAATTTGGTGCCAAGAACAGCAAATTAGGAGCTAACTGGTTTGTCACTTGGTTCTGGATCGACCGTGTTTGTAGTCGCCAAGTCAGGTTAGCTTAGCTAGCTATTGGATGTTTAGCGGTATGAAGGTCATGTAAGAATTCAGTTGTAGAATCATCAATTAGGTTGCAGGGTAGAGCGAATTACTGATAAAACGAATTACTTCGAGTAATTGTGGAATGCTGTTCCGTGTTGAGTTTTCTTATGTTGTACTCTCTCTCTTCCAAAATATAGCAACCTGTTACTCGATTAGATACCACCTAATAACTAGAGGGTCTATTTAGATTAGTAGTACTAGGTGGGAGTCTATCTAGATTCGTATAGTACTAGGTGGTGTCTACTCGAGTTTTAGGTTGCTATATTTTGCGATGAGGAGGGAATATTAATCAACATAATTATGGAGTAACCATAAGTGAATATCTATCTATTACTTATATTATTAAGAGAGGTCCAAAAAGGAGCCACCACATTCATTAAGGCCTAGAAATTCATCATGTTAATCAGAGAAAAAGCGAAATATCTGCACCGATAGATTACAAGGGTGTATATTGGTTGATATAGCTGTATAAAGTACAATTGTTATGGAAACATATGAAATCTAATTCTGTTTTTAAAATTAGCTCCACAGAAACTACATAGGAAAGTCTACTAGTTCCACTTATACTAGAATAAAAAGTCAAATTACCTGGCTGTTGTTATCAGCGCAATCATTTGAATGCAGTACAAATTCTTTATCGCGGACAGAAGGTAATGATCATTATTAGAAAGAAAATTGAAGGGATGTTTTTATTCACCTGTAAGGACAAAAGATACAAAATCTAGCTATTGTGGAGTGGCCGAGATACGATTAGTCAATTATTATGGAAGGCAATGGAACTGACAGTTTATTCTTTGGTACAGCAAAATCATTTCTGCTTGTACCGTGAACTCCAATATTTTGTTTTTTAATAGATAAGACACCGGCTGAGTTTTGTAGCTCACAACACTACTTATGATGTGTTTGGTTGCTGGCCACACTTTACCACAACTAAGATTAGGCAAATTGTGGCAGCCACAAAAGTGTGGTGGACAAATTGCTAGCCATAAAATGTGGCAAAGTTGGCAAGAAAATTGAGTCTATGATGTGTGGGACATATGCTATTGAAAAAGTGTGGCAAGCCACAACTGTGGCATTGAACGAAACACATGTCTAAGAAACGGTGGCTGCCAAAAGTGTGGTGTGGCTGCCAAAAAAGGAATGGATTCCTGCAGGAGCCTTTTTGTGGCCGCTTTCTGAACCCTAATGAACTCGAGGCCTTCTTATTTTGGGAGTGACCATGGTGGTTAGTCAAAGCGTTCTCATTAGGATGGCCTAAGTTTTTTTATAATGGGAGCAGACTCATTAGGCCTAATGTTTTGCTTACTTGTCATTTTTCCTTTTGTTTTTTAAAAATATGCAATTTTTTATATCTAAATTATAGAGAAATTTTAGAGTTTTTGAGAGGTTTCAAAAATTTAGTGCAAATTTTCGTACCTCCTAGTACCATAGTACCAATAGATATCAAATTTTACACTAGAAAATATGGTACCTTCCGGTACCTCCTCAAGGACTGTAAAATCACTCTAAATTATATTATTGTTATAGTATAGTTAGGTGAAATTATTTTATATTATACTATAGTTACATTTACAAGTTTTAAATAAACTTATGGCAGTTTTTTTTTAATAGGATTTAGTAGGTTTGGGTTGAATATTACCATTACACATTCATCGAAGATATGGTCGTCTCCCCATCTCTATGCCAAAACAAACAAGTGAGTGGATAGCAATTCTTCGATGGGGAGCATGTCCTTTGTCTGGCAGCATTGTTGAATTGCCAACCACAAGAAGAATTTGCACCACTGCACACCACTTATTCTTTGATACAGCAGAAATCATGTCTGCTTGTACCATGAAAGATAAAACGAAAGCTGTGACACCATTAAAGATATGTTGAAATGATCTCAATGAAAGACATATCGAAACAATAGTTTTTCTTTAGTAAAGGATGAAGTACATTTTTTTAGTAAATCGAGAAGGGAAGCCTCTAGCTGAATTTTTATTTTAAAAAAAAGCAGCAGAAAACAAATTCAGTCATTGTCAACTTTTATTTACAAAGGCACATGGCTTGTGGAAAAGTGTGCGCAAGCACTTGACGCCCCAATGTCTTGAGCTTGAGTATTATGTCTTCTCCTGGGCTCCTAGCAGCCCGCAGGGTGTCATTGGGATGTCCGCGTATCATTTCAGTGGGGAGGTGACATCGTCAAAGACCATCCCGTTTCTTGAGAGCCAAATGTTCCAAAAAAAATCACAATGGTCAGATCCACCCAATAGGCATGTCCTACAACAGGGGGTCGTGGACATGAATATGAAATGATAATTTAACCTTAAATTTGGAAAAGAGACATTGTAATGATAGTTTGTTCTTAATATATATTGAGAGACGTTTCAAGTGATTCAGAACAATTGCTTTATACTGTTCTTACATGACTACAATATCAGAAGGTTGCATGTGTAGGCTGTATTGCTTGTTTGTTTATAACCTTTGCACTATGCCGTTTTTATCCAATGTTTTTTCAATGAAATGTCAATAACTTGACTCTTTTGACTGATCCTGGATTCCTGCTGCATCATATTATAAGATTCAAAACTTTTTTACTTAAGGTAGTCAAACTTATTACGAAATGCTCAGTCAACTGAAAAAGTTGTATGCCAAGGTAGTGCGATGATTTTCTTTTTAAAGTTCAGGCAAAAGAAGAACAAGAAGATGATAATAAATGGCCTTCTGACTTTTTAAGTTTGTTCAGAAAAAAGATCTTCAATATGCTTGGAGCATTGTTAACAAAAAAAAGTATATACAAATATGGCATCTCCCATATTTGCAACTGTTGGAAGTATAATTGTTAGTTTTCATCTCTCTGTATACTTCTGCCTCTTTTTAAAGTGTGTTCCCACTGAAGATATTTGCTTGATAAGCAGTACTATCTGATTTAGGTTAAGTGCATTGCTTATTTACAATGATTTAGTTCTAATGCATCATTGCACTTGGACGTGTTGAGTTGTTAATGTTCAATTCCTTCTCTTGAGTCCAGATAACAGCAAGAAGCTGAAAAAGCCCAAGCCTTGGAAGCACAATCAAGCAATAACAACAACACAACTCAAACAGATGCGTGATGAATTCTGGGACACTGCTCCACATTATGGTGGGCAGAAAGGTACTGTGTTGTCAGTTTTGTATTTTTTATTACTACATGTATGCTTCAAAGTAGTCGAATTTGACATAGTTTTGCTAAATAGTGCATGTGTGTGATTAATTTCTTTGAAGGTGAATGCCCAGGTAGTGCTGATTTTTCTATTTAGGTGTTTATCAGACGTGTGTGATTAAGTTCTTTGAAATCCTTCTGTTAAATTTGACATGTTCACTTATAGTAGTTAAAGTGGATAAAAATGATTTGCAAAACAAAAATGGCAAACAAGAATTTTATCTTTTTAAGATTCAACACCCTTAGTATTATTGATACAAGTCACGTATGGAGTGGGTATTTCTGAAGGTTTGTACTTGGTCTGACCATACAAAGTCATTATGGATTTGCTTCTCAATTAGCAGTTTTTAAATGTTTTTTTAATTTAGCAAAGGTGTGTTATAGATGTTTTACATCATAAACTGTTTATTTCTCATACTGGTGAAATACATAGTTATTGTTGAATAACAACAAAGTTCAAGGGAAAATAGTTATTGCGTTTTTACTTGTATTCTGCCAGAGATTTGGGATGCGCTTCGAGCTGCTGCAGAAGCTGAGTTATCTCTTGCACAAACGATAGTGGACAGTGCCGGAATCATTGTATCAAATTCTGACATGACAATTTGCTACGATGAAAGAGGTGAAAATTCGTTCTTTGTTTTTGTTTTTTTAGAACAGATCAATATATTGACCCGGCTTTTTGAGAAAGCCCAAAGCATACATAGTCATTTACAGGAAACAAAACAAAAGCAGAAAAACAACCACTAAGAACTACGGCTGGGAACACCAGCTAACAAGGACCGCACCAAGCCACAGACAGCAACCAACTCCTCAAAGCAGAAACTTTACAGCCACCACCACCAAGCAAGGAAAACAGCTACGGAAAAAGCTAAATAACATCTGGCAAAACCCGCGGTCTCACTTGCTGTAACCTCTCCAGGATAGCCTTACACCAATCTTCCAAAGGCACTTGATCTTCTCCCCCTAGCAAGATGCTCCATTTTTATAAAGGATATAGATTTGTAAATGATCTGCAGAGGAGAATTCACAAGAATGTTTTCAAATTCCCAATCATTTCTAACCATCCACAACCCCCAGCAAATAATAGCCACTAACACAATCCAAACCCTGGAAATTTTCTTCTCCCTCATCAACCCTCCCAGATGTTACCAGGGATTTTTTTCCAGGCCCAAAACTTCTTTGGTAATACACCAAGCAAAGATGGCCAGAGGACACCTAAATAAAATATGATTGGTGGTTTCAATTTTCTTACACAGTTTGCAGAACTCATCACCCCCTCTCCAACTCCTCTTAATTAGCTGAGAAGCACAAGGCAGCCTATTCCTCCCTACCAAATGTAGGAAAAGCTTGATTTTTAATTCCACACCTCCATCATTTTTATATCCTACTCCACCAAAGGTCATAATTCTGTACATGGATTTAGTAGAGAAGGTCTTCTTCCTATTGTGCGGCCATGCTACTCTATCCCTCTCATCAAGCTGACAACCAATAATCAAGCTTTTCAACCCTGAAGCTCCGTTTATCTCTGCTCAATTATTTGGTACTCATGTTTGCTTTCCTTAATCATGCTCTGAGTGCTGCATTAACTCTGTTCTTGGAAATCGTCTTGCAGGTGCCAAATATGAATTACCAAAGTATGTTCTGAGTGAGCCAACAAATTTGATCAGGGAAGGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000871