BGIOSGA000919

From RiceWiki
Revision as of 10:13, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000919| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000919, complete gene.| tag = OsI_035...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000919

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000919, complete gene.

LocusTag

OsI_03500

Ensembl Transcript ID

BGIOSGA000919-TA

Ensembl Protein ID

BGIOSGA000919-PA

Length

3375

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32945254..32948628

Sequence Coding Region

32948476..32948628,32948309..32948376,32947306..32947474,32947105..32947193,32946694..32946826
,32946492..32946584,32946285..32946387,32945777..32946027,32945254..32945277

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32945254..32948628 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32945254..32948628 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCTGCGTCTTCCGTGCGCGCGCGGCCCCGCGCCGGCGGCCGCCGCCCGGTGGAGACCCCCGGGGCGGGCGGCGCGGACGGCACCACGTCTCGGCCGAGGGCACGCCGCCGCTTCGTCCGCCGACGGCAGCGGCGCTCCGAGCTCTCCGTCCCTCCACTACGACTACGATCCTTTGGCCGACCTCCTTGGACCAGACGTCGACCCGACCTCATCCCAGAATACTGCTCCAGTTGCAGAGAAGGGGAAGCTGAGGTCCTGGGTTGGTCCAAATGGGCAATACTATCGTGAGCTGCCTTGCCCTAGCTGTCGAGGTAGAGGATACACTCCTTGCAAACAGTGTGGGATAGACAGATCCAGTTTGGACTGCCCTATGTGCAATGGCAAGGGCATTAGGGAGTGTGTGCAATGTGCTGGAGAGTGTGTTATATGGCAAGAATCTATTGATGAGCAACCATGGGAGAAAGTTCGTTCTAGTTCTCCCTTGAAAGTAAAAGAGGATGATGATGTCGACAAACTGGAGATAAAGATTAACACATCAAAAAGATCAAGGCGTACTTACCCATCTCCATCCCCTGAAGTTGCCCTGAAGATTAGCAGATCTTTAAGAAGTCTGAATGCTAAAACAGGACTGTTTACTAAGCATATGAAGATTATACACCAAGACCCCAAATTGCATGCACAAAGGGTTGCTGCAATCAAAAAAACAAAAGGTACTGCTGCTGCAAGAAAGCATGCATCTGAAACTCAAAAGGCATTCTTCAGCAATCCCGAGAATCGGCTTAAGAGAAGCATTGCCATGAAAGGGGTGAAATTCTTCTGCAGCAAATGTGGGCAAGAAGGTCATAGGAGCTTCTATTGCCCAACAGTGAGAGAAATTTCAGGCAGAGCGCATTTCAGATGCCGATTATGTGGGGGAAAGGGTCATAATAGCCGAACATGTGGAAAGCCAAAGTCAGAGAATGAGTGTCAACGACAACCTCGGCACTGCAGCCAATGTGGTGAAAGGGGGCACAACCGTCGTAACTGTCCCAGATCCACCACCGTTGAGGTTGAGGATGTCAAGATTTACTCAGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MLLRLPCARGPAPAAAARWRPPGRAARTAPRLGRGHAAASSADGSGAPSSPSLHYDYDPLADLLGPDVDPTSSQNTAPVAEKGKLRSWVGPNGQYYRELPCPSCRGRGYTPCKQCGIDRSSLDCPMCNGKGIRECVQCAGECVIWQESIDEQPWEKVRSSSPLKVKEDDDVDKLEIKINTSKRSRRTYPSPSPEVALKISRSLRSLNAKTGLFTKHMKIIHQDPKLHAQRVAAIKKTKGTAAARKHASETQKAFFSNPENRLKRSIAMKGVKFFCSKCGQEGHRSFYCPTVREISGRAHFRCRLCGGKGHNSRTCGKPKSENECQRQPRHCSQCGERGHNRRNCPRSTTVEVEDVKIYSE</aaseq>

Gene Sequence

<dnaseqindica>1..153#253..320#1155..1323#1436..1524#1803..1935#2045..2137#2242..2344#2602..2852#3352..3375#ATGCTGCTGCGTCTTCCGTGCGCGCGCGGCCCCGCGCCGGCGGCCGCCGCCCGGTGGAGACCCCCGGGGCGGGCGGCGCGGACGGCACCACGTCTCGGCCGAGGGCACGCCGCCGCTTCGTCCGCCGACGGCAGCGGCGCTCCGAGCTCTCCGGTACGAGTATCCCTTGCTTCGTGTGATTTTTTTTTTTCCGTTTCGAAGCTTTTTGTTCTCTGCCATTCCCAAGCTCTGACCCTGGCGTTGCCGCCGCAGTCCCTCCACTACGACTACGATCCTTTGGCCGACCTCCTTGGACCAGACGTCGACCCGACCTCATCCCAGTACGTGTTTACTCTTCCATACTGTTCGATCGTGTGTTAGCTGATCGTCAGACAGTTCAGATAGAAGATGAAGCGTTGTTGTGAGGTTGTAAGCTACTGCACAATTCTATGCGTGAATAGTGGAGTACCATCTGATTTTCACCACTATGGAGTGGTGAATTAGGTTTAGGTGAGGTAAGTAGAGTACTAGTCAGTCTCAGAAAGGGTTCCACCTTTGATCACTTCCGAGAATGCATTTGTTGGATTAATTTGTGGCAAACATAAAACATCACACCTAAAATTAGCTGCTTACTTGGCATGTTTTCGTACAAGTTCTGCAACAGAGAGGCGTGTTGAATTTCTTTCCTCTCAAATAGGATTTGTAACTGCAGAAGATCTTTCAATGCCGGCGTCATCTTGGTGACTTGGCTAATTTGGAAAGAGTACAATGAGTCTTTGAGGGGCGTGCAGTCTCTCCGGTGAATCTTTGTGCGTCAATTGAAGATGAGTGGAAATCGTGGCTGGAAGCGGGCTTGCCGTAGTGTAAATAGAGGGTTTCTTTCTGGGTTGCTGTTGTAGCACGCCTTTTCTCTTGGCGTGCCATGAAATCTGTAACTTCTTTCTTCCTTCTTAATATACTCCAGTCGGTCTTTGCCAACCCGGTGAAAAAAAAAAGGATTTCTAACTTGCCAGACACAGGGAATTTGGTGAAGGAAAATCATGTCCATGGCAAATGGCATTCTTTCAACAGAGCTGAGCATCGTGTATTACGTGCCATCAAAGCTTTGAGAACTGAGGGAAGACTTCAACGGTTCCCTGTTAGTGCGTGTTGAAAAGGGTAGTCTTTTGGTGCAGGAATACTGCTCCAGTTGCAGAGAAGGGGAAGCTGAGGTCCTGGGTTGGTCCAAATGGGCAATACTATCGTGAGCTGCCTTGCCCTAGCTGTCGAGGTAGAGGATACACTCCTTGCAAACAGTGTGGGATAGACAGATCCAGTTTGGACTGCCCTATGTGCAATGGCAAGGTGAGCCTGCCAGATATGCTGTAGCCTGTAAGTCAGCGTCAAGAAAATGATATTCCTAAATATATGTGTTCTTTCATATACTTATCCAAATATTGTTATGCTTGTCTATCAGGGCATTAGGGAGTGTGTGCAATGTGCTGGAGAGTGTGTTATATGGCAAGAATCTATTGATGAGCAACCATGGGAGAAAGTTCGTTCTAGGTGAATGCGGCATCTTTTAATTTAGTCTTATACCAACTTGCTTGTTATAGCCAGACATTTTACCCATTAGAGTAACTGCAGAAAGATTTGTTGTTGCAAACTTCTTTGAAGGCTATTAAGATGTTCATTGTGATTTGAATTGTCTATTTCCTGTAGACATTTAATTTTATGGAAAATTGTGACCAATGAAGTAATTATTTATGGCTCTTTAACATAGCTAGAGAAAAATACTTTAGGATTCCTGTTCTTAATGCTACCTACCCTTCTTCAACTTGCAGTTCTCCCTTGAAAGTAAAAGAGGATGATGATGTCGACAAACTGGAGATAAAGATTAACACATCAAAAAGATCAAGGCGTACTTACCCATCTCCATCCCCTGAAGTTGCCCTGAAGATTAGCAGATCTTTAAGAGTAAGTGATGATGCTTTCTTACATGCAGAATACCAAACTGTACCTTATCTGCCAATATGCTTTGCTATCTTTACTTATGGCTTTTTAAAAAGCTTAATAACAATTGCAGAGTCTGAATGCTAAAACAGGACTGTTTACTAAGCATATGAAGATTATACACCAAGACCCCAAATTGCATGCACAAAGGGTTGCTGCAATCAAAGTAAGATTTAAGGAGAACTGTCGTAATCATATGTTCTTGTTAGATATGATCTGATTGACACTGAACTATCCCTCTCTTTTTTTAATTTGTATCTGAACTTGAAGAAAACAAAAGGTACTGCTGCTGCAAGAAAGCATGCATCTGAAACTCAAAAGGCATTCTTCAGCAATCCCGAGAATCGGCTTAAGAGAAGCATTGCCATGAAAGGTAAATCTACCTTTCATTTACTCATTAGAGAAGTGTATGTCCATTTAGACAGTTTGGCCATTTCTGTTGCCAGCTGCTCCTGTCCTTGTATTGTTAGCCAGCATGTTTATGTATTCTCTTTGTCTTGAGTTCAATTGGTAGCACTAGAATTGATTATAGTCTTACTTCAATGTACACTTTTGCATGGATATTCTGCTTGTTACCAAGTTGGAACTTCTTGTCCACATGAAGAACATTTGACACCTGATGCTTTGCAGGGGTGAAATTCTTCTGCAGCAAATGTGGGCAAGAAGGTCATAGGAGCTTCTATTGCCCAACAGTGAGAGAAATTTCAGGCAGAGCGCATTTCAGATGCCGATTATGTGGGGGAAAGGGTCATAATAGCCGAACATGTGGAAAGCCAAAGTCAGAGAATGAGTGTCAACGACAACCTCGGCACTGCAGCCAATGTGGTGAAAGGGGGCACAACCGTCGTAACTGTCCCAGATCCACCACCGTTGAGGTTGAGGTTGGTGCTTCTGGCTATATAGTTAAACAAGATAATGTTCATAGTTCAGGTATTTATTCATGTAGTTTCTGCTCGGCAAAGGGGCACAATAGGCGTACATGCCCGAAAAGAAAGGCTAGCATAGGGCAGCAGAAAGATTGAAATATACATGTTAATCCACATAGCAATCTTATGGTGTTTGCTGAAAAGTTTGTGATGGTCGCTTTCATTTCCTTATATAATACACGTTGGTGCACGGGACCAAGTTGGTTTCTGTTCGCATTGTATATTTTCACCACTACTTTTGCATTGTATACTTGCATTTCTGCTTGTTTGTATATCGTCAGCTCTGGTAGGGTGGTATACAAAGCCAAAGGTTTCAGACTTTCAGTACATTCTTGAGGCATGACACACGGTGGACTTCTGAGGACTATTGGCTATTGTGAAAATTCACCATCGTTTGTATATTTCACTCCAAAGATCTGATAAAATAAGTCACCCCTGCAGTTACATTTTGCAGGATGTCAAGATTTACTCAGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000919