BGIOSGA000954

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Revision as of 10:13, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000954| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000954, complete gene.| tag = P0047E1...")
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Gene Name

BGIOSGA000954

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000954, complete gene.

LocusTag

P0047E11.29

Ensembl Transcript ID

BGIOSGA000954-TA

Ensembl Protein ID

BGIOSGA000954-PA

Length

4739

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32339748..32344486

Sequence Coding Region

32344222..32344486,32343482..32343782,32343261..32343357,32342901..32343167,32342745..32342822
,32342497..32342598,32342367..32342416,32342191..32342290,32341985..32342083
,32341789..32341899,32341448..32341571,32340877..32341032,32340632..32340798
,32340296..32340370,32339748..32339768

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32339748..32344486 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32339748..32344486 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAAAGAAAACAGAAGCTTCTCTTCCCCTCTCCCCCAAAACAAAAGCATCAAAATATTCCTCCTAAATCAAAAGAAAAACAATCAATTTCAAACGAGCCATCTCTCTCCATTCTCGTGCCCCTCCTGTCTCCGCGCATTCCTCCGCCGGAAACCCTGGTTCATCGGCGAGCGGCGAGGCTCGGGGACTCGATTACCCTGCGAGGAATCGAGGTCGGACCGCGGGTGGGGAAGGCGAAGATGGCGGGGTCCATCGATCGGCCCTGTGCAGGTTTTGAAGGCATTGTGCATGATGATGATAAGAAAGAGTGGAAATCCGATGAGGACAACTCAGAAGGTGACAAAAAGGCCAAGGCAGTCTCCTTCAAGAACCGAGCTATCAGTGCTGGAAATAAATTTAGGCGTTCCTTGAGAAGGAAGAGAAGAAGGAGGGTCGGCGACCATGTAGCCTCTATAGAGGACATAAGGGATGTCAAGGAGCTGGAAGCTGTCCAAAGATTTCACCAGTGCTTACATGATGAGGGCTTGTTGCCAGAACGTCATGATGATTATCACGTGATGTTGAGGTTCCTGAAAGCGCGGAAATTTGATATTGATAAAGCAAAACATATGTGGTCGGAAATGCTTAGATGGAGGAAGGAGTTCGGGGCTGACAACATAGAGGAATTTGACTATAGCGAATTAGATGATGTTCTGGAGTGCTATCCACAATTTTACCATGGTGTGGATAAAGAGGGAAGGCCTGTCTACATAGAACTAATTGGAAAAGTTGATCCCAACAAATTAGTACAAGTCACAACTATTGACAGATATGTAAAGTATCATGTCAAGGAGTCTGAGAAGTGCTTGCAGATGAGGTTTCCAGCTTGCTCCATTGCTGCAAAAAGGCACATAGATTCGTGCAGTACTATCTTGGATGTGCAAGGAGTGGGTTTGAAGAACTTCTCAAAAGATGCAAGAGAGCTAATCATGCGACTTCAGAAGATCAACAATGACAACTATCCAGAGACCTTGCACCGATTGTACATTATAAATGCTGGCCAAGGCTTCAAGATGTTATGGGGTACAATAAAATCATTTCTTGATCCACAAACTGCTTCGAAGATTCATGTCCTTGGAAGCAAATACCAAAATAAGCTACTTGAAACTATTGATGAGAGTGAACTTCCAGATTTTCTGGGTGGCAAATGCAGGTGTGAAGAACATGGAGGTTGCATAAAATCAGATAAAGGTCCTTGGAAGGATCCTGACATAATAAAGAGGGTCCTTAATGGTGAAGCAAACTATGGACGGCAAATTCTTGCTATATCAAGCATTGATGGGAAGAAAATATGTTATATTAACCCTAGACACTTAACTAAAAAATGCAGCGATGCCTCTGCTGAGTCTAGTTCTGAAATGGAAGATGTTTCATCTCCTATAGCTTCAGTTAACCCCATCATAAACTCTCATTTGACACCCGTTGACGAGTCCAAATTGCCGGGAAATACTTCCACATCTGGTGCCCCTCCCAGAGTAGAGGACATCCCTGTTGTTGACAAGGCTGTGGACACATGCGCCGGTCCATCAACCAGCTCAATGGCTTTTAATTCAGATTCGTTCTCGTTGAGAAACATAACGATGGAACTGGGAGGACTTCGAAATCGAATTACTGCGTGGTTGATAGTCTTAATCGTGAGCTTTGTTGCCGTGCTTCGTTCTGTCCCAAGCAGAGTGACTGCAAGTCTATCAAGCCAGGCCATTTCCCGTGAAAACGGTACACATTCGTCTGTATTGAGACGTCTTGGTGAATTGGAGGAGAAATTACAGGAGCTTGAAGCAAAGCAATCTCAAATGCCACCGGATAGAGAGGAATTGCTCAATGGAGCCATTCACCGTGTTGATGCATTGGAAGCCGAGCTAATATCTACAAAGAAGATGCTTTATGATGCATTGATGAGGCTGGACGAACTGCTTGCATACGCCGACCAGCAAAAGAATATTCAATTTCGGAAAAAGAGGTTCTGCTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MKRKQKLLFPSPPKQKHQNIPPKSKEKQSISNEPSLSILVPLLSPRIPPPETLVHRRAARLGDSITLRGIEVGPRVGKAKMAGSIDRPCAGFEGIVHDDDKKEWKSDEDNSEGDKKAKAVSFKNRAISAGNKFRRSLRRKRRRRVGDHVASIEDIRDVKELEAVQRFHQCLHDEGLLPERHDDYHVMLRFLKARKFDIDKAKHMWSEMLRWRKEFGADNIEEFDYSELDDVLECYPQFYHGVDKEGRPVYIELIGKVDPNKLVQVTTIDRYVKYHVKESEKCLQMRFPACSIAAKRHIDSCSTILDVQGVGLKNFSKDARELIMRLQKINNDNYPETLHRLYIINAGQGFKMLWGTIKSFLDPQTASKIHVLGSKYQNKLLETIDESELPDFLGGKCRCEEHGGCIKSDKGPWKDPDIIKRVLNGEANYGRQILAISSIDGKKICYINPRHLTKKCSDASAESSSEMEDVSSPIASVNPIINSHLTPVDESKLPGNTSTSGAPPRVEDIPVVDKAVDTCAGPSTSSMAFNSDSFSLRNITMELGGLRNRITAWLIVLIVSFVAVLRSVPSRVTASLSSQAISRENGTHSSVLRRLGELEEKLQELEAKQSQMPPDREELLNGAIHRVDALEAELISTKKMLYDALMRLDELLAYADQQKNIQFRKKRFCF</aaseq>

Gene Sequence

<dnaseqindica>1..265#705..1005#1130..1226#1320..1586#1665..1742#1889..1990#2071..2120#2197..2296#2404..2502#2588..2698#2916..3039#3455..3610#3689..3855#4117..4191#4719..4739#ATGAAAAGAAAACAGAAGCTTCTCTTCCCCTCTCCCCCAAAACAAAAGCATCAAAATATTCCTCCTAAATCAAAAGAAAAACAATCAATTTCAAACGAGCCATCTCTCTCCATTCTCGTGCCCCTCCTGTCTCCGCGCATTCCTCCGCCGGAAACCCTGGTTCATCGGCGAGCGGCGAGGCTCGGGGACTCGATTACCCTGCGAGGAATCGAGGTCGGACCGCGGGTGGGGAAGGCGAAGATGGCGGGGTCCATCGATCGGCCCTGTGAGTGCGAACTGTTTCCCTTCTTCCTTCGACTGCGTGTTCCCTGATGATTCGTTGTTTCTCCATGCCGCCATGCGTTGCCCGTTCTCGTTTATGCAATGCTTACCTGCTTGTCATTCGCGAACACCGGAAAATTGCGGTTGAAGAGAGATTGATTCTGTGAGGGGGTTCATTGGGGCAAGTGGAGAACATGGCAAATCACTCGGAAATAGACAAATAGTTCATGTTCGAGTGGGATTGAAATTTTAATAGTAGTAGTTTAGCACCTGTAGAGATTATAATCACACCTCCCTAATTTTTTTAACGTGCGTGTAATTGCGCTGCTTTCAGTTAATTGCAACTCCTATGTACTCTGCTCTCGTATTGATTATTTTCAATGTAGTTGTTACCATTTCAACCTGATTAGGAGGAGGGGCATTTCGTTGAAACTATATAGCAGGTGCAGGTTTTGAAGGCATTGTGCATGATGATGATAAGAAAGAGTGGAAATCCGATGAGGACAACTCAGAAGGTGACAAAAAGGCCAAGGCAGTCTCCTTCAAGAACCGAGCTATCAGTGCTGGAAATAAATTTAGGCGTTCCTTGAGAAGGAAGAGAAGAAGGAGGGTCGGCGACCATGTAGCCTCTATAGAGGACATAAGGGATGTCAAGGAGCTGGAAGCTGTCCAAAGATTTCACCAGTGCTTACATGATGAGGGCTTGTTGCCAGAACGTCATGATGATTATCACGTGATGTTGAGGTGCAATTTTTTTCTGATCTCAGAGTCACAGTTACTTGGATTTCTCCTTACTCCTGCAGAAAATTCAGCGTTGCTTATTTGATTTAAAATTTCTTCATGTGCCTATGACATGTTACACATGTAGGTTCCTGAAAGCGCGGAAATTTGATATTGATAAAGCAAAACATATGTGGTCGGAAATGCTTAGATGGAGGAAGGAGTTCGGGGCTGACAACATAGAGGTAAAGCAGAGACTGGACCTTATGCTCCAGTACGTAGGTAGTGATAGTCTTTCTTCATGTAACTTCTGGAAGTTTGACATCTGGATCATTTAGGAATTTGACTATAGCGAATTAGATGATGTTCTGGAGTGCTATCCACAATTTTACCATGGTGTGGATAAAGAGGGAAGGCCTGTCTACATAGAACTAATTGGAAAAGTTGATCCCAACAAATTAGTACAAGTCACAACTATTGACAGATATGTAAAGTATCATGTCAAGGAGTCTGAGAAGTGCTTGCAGATGAGGTTTCCAGCTTGCTCCATTGCTGCAAAAAGGCACATAGATTCGTGCAGTACTATCTTGGATGTGCAAGGAGTGGTATGTTATTTTATAGCCAATCTTGCTATCGCCAAAATTTCTGGGTAGATTAGTAGTTAACTTGTTTTTTATGTGAAGGGTTTGAAGAACTTCTCAAAAGATGCAAGAGAGCTAATCATGCGACTTCAGAAGATCAACAATGACAACTATCCAGAGGTAGGTGATTCCATTATGTTTTAATGTTATTATTCACTATTGCCCTTTCACTTCGTTTTTTGTCACTATATACATTTCTATAGAACTTGTTTTTATCTGGGGTCATAACAAAGGACTTATCTAATACCTTTCTAGTGCTCGTGCAGACCTTGCACCGATTGTACATTATAAATGCTGGCCAAGGCTTCAAGATGTTATGGGGTACAATAAAATCATTTCTTGATCCACAAACTGCTTCGAAGATTCATGTAAGTATTGAAAATTGTTATTCAGAATAATATTTACTTCTAGTATGTGATAATAGCCTTATCTGTCTTTTTTCACCTAGGTCCTTGGAAGCAAATACCAAAATAAGCTACTTGAAACTATTGATGAGAGGTTAGGTCTTTTCTACTGTCACAAATACTGTCGTTTGGTTCCTATCCTAATAATTTTGTTTAATTCATGTTTTCAGTGAACTTCCAGATTTTCTGGGTGGCAAATGCAGGTGTGAAGAACATGGAGGTTGCATAAAATCAGATAAAGGTCCTTGGAAGGATCCTGACATAATAAAGGTCTTCCACTCTTCCTGAACCCTACCCTTCTTCTTATTCATCCTGTACACCTTTTTTTTTTTGAAAAGAAATCCTGTACACTAAAATAATGTGTCTATGATTTTCAGAGGGTCCTTAATGGTGAAGCAAACTATGGACGGCAAATTCTTGCTATATCAAGCATTGATGGGAAGAAAATATGTTATATTAACCCTAGACACTTAACTGTAAGCATGCTTTGAATGGAGATTACTCATACATCATCTTAAAATAACAACTATCCGTTAGAAGCTTGATTCTATCCCCTCGCAGAAAAAATGCAGCGATGCCTCTGCTGAGTCTAGTTCTGAAATGGAAGATGTTTCATCTCCTATAGCTTCAGTTAACCCCATCATAAACTCTCATTTGACACCCGTTGACGAGGCAAGATCTTGTACCTTTTGGTTTTTTCAACTGCACGAGGCTGATATTAATGATTAGTACTCGTTCTATTGGTCTTTTCAACTGCACAAGGCTGAGCTCAGATTACTGATTAGTACTCGCTCTAAACAATGATGTGGCATTCTTAATTTTCTTCCTCCTTAATCAATCTTTATGTTGGTAAATATGATCATAAATGTATCTTTTTATATTTCTGCAGTCCAAATTGCCGGGAAATACTTCCACATCTGGTGCCCCTCCCAGAGTAGAGGACATCCCTGTTGTTGACAAGGCTGTGGACACATGCGCCGGTCCATCAACCAGCTCAATGGCTTTTAATTCAGGTCTTTATATGACACCTTCATACTTGTACCTCTTATTGAGAAGTTGTCTACTTGCTGATTTCAAACATTCGTACCCCCATATGCAACTAGGGAAATGTGAGATACTGGGAATTTTGTTGGCCGTTTGGTTTGAGGAATCAAACTATCTAGAATGGGTGATCCATCATGGGACCATCTCTCAAATCTAGTGGAATGACTCCATTTCTCAGTTTCTCATTTAGTATGTACTTTTTAGAGATGATGGACAAATCCATTCCATTCCTCAAACCAAGCGACCTGTATAAGATCAAGTGGTCATCTCATTCCTCAAACCAAACATGCCATTACATTATAGTATGTAGTGAGTGGTGACCGGTAAGCCCACCAAGAGTTTATTGGAGTGATTTTGACCGAATTTGTTGCATGTTTTACACAGATTCGTTCTCGTTGAGAAACATAACGATGGAACTGGGAGGACTTCGAAATCGAATTACTGCGTGGTTGATAGTCTTAATCGTGAGCTTTGTTGCCGTGCTTCGTTCTGTCCCAAGCAGAGTGACTGCAAGTCTATCAAGCCAGGCCATTTCCCGTGGTAACTATAGTGCTGAGTTCCCTCAAGAAATTGAGTTTTTGGAAGAGTTTTGACCTCCATCTTCTCCCGGATTCACAGAAAACGGTACACATTCGTCTGTATTGAGACGTCTTGGTGAATTGGAGGAGAAATTACAGGAGCTTGAAGCAAAGCAATCTCAAATGCCACCGGATAGAGAGGAATTGCTCAATGGAGCCATTCACCGTGTTGATGCATTGGAAGCCGAGCTAATATCTACAAAGAAGGTACTGTTGAGTCTTGACATATCATATGCACTCTGTGGGTGTGCATGTGTGACAAGGAAGATGTACTCTCGTTAGATAGCTTATTGCTTAGTGGTATCAAGGATATAACTACTGTTCTGAGGTAATGTTTCTATATGTTATACTATTACACCCAAGAATTGGCAGTTCACCGAATTTCTTGATTGTTCGCTATAGTAAGAACTAAGAACTGAACGAAAAATTGCGATTTTCCATATTGACCTTTGTTTCTCCCATGAGCAGATGCTTTATGATGCATTGATGAGGCTGGACGAACTGCTTGCATACGCCGACCAGCAAAAGAATATTCAATTTCGGGTAAGTTGTGGATTTTTCCTATGAATTACTCTTTCCTTTTGAGAAATGCTTGTTCTTGATGCCAACTACTCTTTAGTTATGGATGTGAGTGAGTTCACCCAGAAGTACCTATTGACCCGCTAGTTTATATAAAAATGAATTTATTCTTTGTTGCTAAGTGCGTGTTTTTTTAAGTTAAACTAGATTGAGTCAAAGGGAACTTCATGATTTGGTTCGCACACATCCCTGTTCTATCGTACTCCCTCTGTTTTTAAATATATGACGCCATTAATGTTTAACATACATTAACCATTCGTTTTATTAAAAAAAGTATAAATATAAAAAATATAAGTTATGCTTGAAGTATCTTTAATAAAAAAATAAATCATAACAAAATAAATAATACTTGCATAGTTTTCTTAATAAGATGAATGGTCAACCATATATCTAAAAGTCAACAACATCATATAGTATTAGGAAAAAAAATGTAAAGAATATCTCATAGCACTGAGCTAGCCAATTCATATGTGTTCATCCATTATATGCAGAAAAAGAGGTTCTGCTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000954

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000954&oldid=38678"