BGIOSGA001012

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Revision as of 10:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001012| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001012, complete gene.| tag = OS01G06...")
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Gene Name

BGIOSGA001012

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001012, complete gene.

LocusTag

OS01G0682200

Ensembl Transcript ID

BGIOSGA001012-TA

Ensembl Protein ID

BGIOSGA001012-PA

Length

4476

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31398538..31403013

Sequence Coding Region

31402922..31403013,31402739..31402830,31402527..31402626,31401025..31401886,31400790..31400923
,31398538..31399414

Genome Context

<gbrowseImage1> name=IndicaChromosome01:31398538..31403013 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:31398538..31403013 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGTCAGCTAAGGAGGAGGCAAAACCGAAGCCGCGCCTCATTGTCCGCCTCGGGGTATTCCTCGCGTCGCACCACATACTCTTCAGCGCTGTGTGTTGTACGGCGGGCATAATCGCGCTCCTCTTCCTCCCTTCGCTTGCCAAGAACACGTACCTATCAGAGAACGCTCTTATACCCGGCTCTGCGAATACATTATTTTCTACTGAGGATGTCCAGGAAGCAAACAGATTTGCGAAGGGAATTGAAGCTGCAATTGGGGAATCAAGAGGTGGAACAACGGAGATCCCAAAATTCATAGCACAACAAACAAAAAATCTGGGAGCAGAAGTGTATTACCATGAGTTCCTCCCTGACAGCAAATGTTTTCATCCTCTGAAGTTCTTTACATCCATGACAAATAATATGGCAGCCAAACCCAATGGAACCTACACCAACTTTGGCATTAACACAGTTGGCATTATACGGGCTCCACGAGGTGATGGCAAAGAAGCAATTGTACTGGTTACTCCTTATAATTCTCAGAAAGTTACACCAAATGAATTATTATCACTTGCACTTGGATTCTCTATCTTCTCCCTCCTAAGTCGAGCTGCATGGTTATCAAAGGATATTGTCTGGCTGTCTGCAGACTCACAATTTGGAGAGTACTCTGCGGTCTCTTCATGGTTAAATCAGTATCATAATCCTATGTTTCTGAGTCACCCAGTGAATTTGGATACCAAGATCTATGGTGCAAATCAAATTTTATATAAACCTGATGGCACTGCAGAAAAGGCAGAACTTATGGCTTTCAAACGTGCTGGAACAATGGCTGCTGCACTCATATTTAAAGTTGGAGAAACCAGGAAATATGGTGATAGAGATAGTGTCACGATGTATGCAGAGGCATCTAATGGCCAAATGCCAAACTTGGACCTTCTGAATGTGGTGCACTATTTAGCTGTTCATAGACAAGGTTTTCGCGTGAATGTCGAGACATTTAATTCCTTGTTGAGCTCTTCATGGCTTAGGGTTATTGCTGAAGTATTTCAAAATCTTGGGAGTTTGTTGAGAAAAATAAATCCTGACTGGAAGCTTGACGTGACCGTTCCTGATTATGTGGAGGGTACTGCAAACCTTGCTAGTTCTATGTATAACCAGGCTCTTGGAGTGCCCACAGGTTCTCATGGTGCTTTCCGTGACTATCAAGTTGATGCAGTTTCTTTAGAATTTGCACCAGCATTTCATCTTAAAAACGAGAATGCTAAATCTTCATTTCTTCTCAGGGGTGGAAGGTTAACTGAAGGGGTGGTGCGCTCTGTAAATAACCTGCTCGAGAAGTTCCATCAATCGTTTTTCCTGTATTTCCTTACAGCCCCAAGCAAGTTCATTTCAGTTGGTGTATATATGATTCCGTTTGCATTACTCCTGGCACCCCTCCCAATAGTTGCTGCTGCTCTTGCTGGTGGTAGTAAAACCAAGGGGAAATTGGAGGATGAATGTAAAACAAAGGGTAATGCTGATGACCTGCAAATGGAGGGTGGATCGTGGAAATGGCTTAAATCTGCAAGAGTACTACTTATCATCCAATTTTGGGCAGTACTTGTTTCTTTACTCCCATACTACATTAGCCAAATTCCTGGTGCTATGCCAATACAGTATGCAGTGATTTGGGCCGTTCTCTCCATCACTATATTGATCATCCTGTATGCAATGTTTGGCTCTCCATCCCGTGCTGGTGTGGAATGGAAGCTTCTAAAAGCTACGATGATCACTTCCATCACCATAGGAATGGGGCTTATGTCGATCATAAATTTTGCTACTGCTCAGCTTGGGGCTCTGATATTGATCCCAATGTGCTTGTTTTCTCGACCGCTGAGGGCACAGCTCGAGATGAATTTCCTACCTCGCACAGTATTGTTGGCCTCAAACATACTTCTCACCGTCTTGGGTTTCCCTCCAGCTGCATTTCTTATCATGAAAGGTCTATCCAAGGGATCATGGACAGTAGACATTGTTGGTGATTTCTGGCTGTGGATGGAGTTCTTGTGGGAATGGAGCAGCGCGACATATCTGTATGTATTTCTTGTCCATCTTCCCTGCTGGCTCTTGTGCATCCATGTGTTGCTGCATCCATGCTACCAGCCTGAATCAAAGATGAAGCAGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MASSAKEEAKPKPRLIVRLGVFLASHHILFSAVCCTAGIIALLFLPSLAKNTYLSENALIPGSANTLFSTEDVQEANRFAKGIEAAIGESRGGTTEIPKFIAQQTKNLGAEVYYHEFLPDSKCFHPLKFFTSMTNNMAAKPNGTYTNFGINTVGIIRAPRGDGKEAIVLVTPYNSQKVTPNELLSLALGFSIFSLLSRAAWLSKDIVWLSADSQFGEYSAVSSWLNQYHNPMFLSHPVNLDTKIYGANQILYKPDGTAEKAELMAFKRAGTMAAALIFKVGETRKYGDRDSVTMYAEASNGQMPNLDLLNVVHYLAVHRQGFRVNVETFNSLLSSSWLRVIAEVFQNLGSLLRKINPDWKLDVTVPDYVEGTANLASSMYNQALGVPTGSHGAFRDYQVDAVSLEFAPAFHLKNENAKSSFLLRGGRLTEGVVRSVNNLLEKFHQSFFLYFLTAPSKFISVGVYMIPFALLLAPLPIVAAALAGGSKTKGKLEDECKTKGNADDLQMEGGSWKWLKSARVLLIIQFWAVLVSLLPYYISQIPGAMPIQYAVIWAVLSITILIILYAMFGSPSRAGVEWKLLKATMITSITIGMGLMSIINFATAQLGALILIPMCLFSRPLRAQLEMNFLPRTVLLASNILLTVLGFPPAAFLIMKGLSKGSWTVDIVGDFWLWMEFLWEWSSATYLYVFLVHLPCWLLCIHVLLHPCYQPESKMKQE</aaseq>

Gene Sequence

<dnaseqindica>1..92#184..275#388..487#1128..1989#2091..2224#3600..4476#ATGGCGTCGTCAGCTAAGGAGGAGGCAAAACCGAAGCCGCGCCTCATTGTCCGCCTCGGGGTATTCCTCGCGTCGCACCACATACTCTTCAGGTTCGCTCTCATCTCTTCGTCTTTGATCCAATCTTGATTCTCCTGTTTCTTTCTGTCTGAGACATTGACATTGTTCACCCTCTGTGACCAGCGCTGTGTGTTGTACGGCGGGCATAATCGCGCTCCTCTTCCTCCCTTCGCTTGCCAAGAACACGTACCTATCAGAGAACGCTCTTATACCCGGTAAGCTTTTTTCTTATACTGCTATTCCATGAAACAATCATCTCCGATGCTGATTGTCAGACGCTTCTTTCTCATTGGTATTAGCTGCAAATTAAGTTGTTTTAAAATGTAGGCTCTGCGAATACATTATTTTCTACTGAGGATGTCCAGGAAGCAAACAGATTTGCGAAGGGAATTGAAGCTGCAATTGGGGAATCAAGAGGTGGAACAACGTATGTTATTCTGTATAGAGTTCCCTTGGTTCATATTCTGCTTCCTTCATAGACAATGGGCTTTAACAAAAATTGCACTGTGTACATAATGTTTACTTATCATGTGATGCTCTATTTTGAGTCTACTGTTAAGGGGCTTCCTCTGATGAAATACATCCTTAATACCGCATTTTAGTTATACTATTGAGCGTAGACATGGTATCCACATAACTCTAAACGCAAAGAAGTTTTTTCATGGGTAGTAACAAACGAATGATAAAATAAAAGTCAGAGATATACAAAGTTCAGGTTTTTTATGAGAAAACAATGTAGATGCACAAGCGCACACCATACATGCACTTGAGTGGAAACCCTAGCACATGAGTAGAATGGTGGATGCTGCGCATAAGTTAGAGCATCATCAAGCACCGTCATGTCCTTTCCATGAGACACACATGTAAATATAACTTCTACATTTNTGCTTATGAAATATTAATCTAAAAGTAAATTATAAGTTTGTGCAATGATGATGATACTCTGCACATTGAATAAGTGATAATAAATTACAAGAAGTGAAGGAACAAGTGGTATAATCCTATGTTTTCCATAGCTTGTAAGTTTATATGATTTTCTCAATGTCTAATTTTATGCATTATTGTAGGGAGATCCCAAAATTCATAGCACAACAAACAAAAAATCTGGGAGCAGAAGTGTATTACCATGAGTTCCTCCCTGACAGCAAATGTTTTCATCCTCTGAAGTTCTTTACATCCATGACAAATAATATGGCAGCCAAACCCAATGGAACCTACACCAACTTTGGCATTAACACAGTTGGCATTATACGGGCTCCACGAGGTGATGGCAAAGAAGCAATTGTACTGGTTACTCCTTATAATTCTCAGAAAGTTACACCAAATGAATTATTATCACTTGCACTTGGATTCTCTATCTTCTCCCTCCTAAGTCGAGCTGCATGGTTATCAAAGGATATTGTCTGGCTGTCTGCAGACTCACAATTTGGAGAGTACTCTGCGGTCTCTTCATGGTTAAATCAGTATCATAATCCTATGTTTCTGAGTCACCCAGTGAATTTGGATACCAAGATCTATGGTGCAAATCAAATTTTATATAAACCTGATGGCACTGCAGAAAAGGCAGAACTTATGGCTTTCAAACGTGCTGGAACAATGGCTGCTGCACTCATATTTAAAGTTGGAGAAACCAGGAAATATGGTGATAGAGATAGTGTCACGATGTATGCAGAGGCATCTAATGGCCAAATGCCAAACTTGGACCTTCTGAATGTGGTGCACTATTTAGCTGTTCATAGACAAGGTTTTCGCGTGAATGTCGAGACATTTAATTCCTTGTTGAGCTCTTCATGGCTTAGGGTTATTGCTGAAGTATTTCAAAATCTTGGGAGTTTGTTGAGAAAAATAAATCCTGACTGGAAGCTTGACGTGACCGTTCCTGATTATGTGGAGGGTACTGCAAACCTTGCTAGTTCTATGTATAACCAGGTAATTGAAATATATATTGTTCATTCATTTCCATTTGGTCTATAAAAATATAAGTTTTTTCAACTCTGTTAATCCCTTCTTGTTTGGCTTTGCAACTGCAGGCTCTTGGAGTGCCCACAGGTTCTCATGGTGCTTTCCGTGACTATCAAGTTGATGCAGTTTCTTTAGAATTTGCACCAGCATTTCATCTTAAAAACGAGAATGCTAAATCTTCATTTCTTCTCAGGGGTGGAAGGTCAGTTTCTATTGTGTTACGGTTGTGTTATTTTAAGCTGCTCTTTTTTAGAACAAGTAGGTAGGGAGCGTATCCTATGCACACAGGCCCTCGCGTGTACACACCGTGTACACCAACTAAAAATTATCACAAAAAATTCTAGGAAAATTCATACATGTACTTTCAATAGTATTACATCTACGTGCAAAGTCGCATCTTCAAATTCATTCTACATAGAGAATAACAAAAAAGATAAAATTCTGACAAAATTACAACCTTAAAACTGTCAGATTTTTTGTTTTTTTTTTGTTACGGCTAAAATATAATGAATTTGACGTTAAGATTTTAACCCTAGGTGTAATACAATTGAAAGTATGGGTATGATTTTTTCTAGATTTTTTGGTGACATTTTTTAGTTGGTGTACACGTGTGTACACGTGAGGGCCTGTGTGCATAGGATATGTTGCCAAGTAGGTATTGTTGACATGCATTAAGCAGTTCATTACTTAATTAGAGTGCATGTTTACCTATTCAAAAGTGTTTGATTGTCAGATACCAGAAAACTGAATACATACTGAAGGTTTTAAACAAACTCTAGCTTATGCCATTTGTATGTATGTATTTCTCTCTGATAACCAAAGTAATTCAGCTTTGTCAAACATTACCTAATTTCATATATCTAATTGCTTTGTGATGCTCAATTAATTTTATTGTCAAAATATACTATTAGTGAGCATTAAAGCACATGTTCGATGCTAAAGCTGTATAATCTCAGGCAACAAAAGGCGGATTATAAAATAATTCTGTAACTGCCTTGGCCTGTTAACCTTGCATATTCTTGTGCGGAATTATTCTGGTGAGAGGTCTGATTGCATGTCAGCCTCATAACAGTCAAAAATTTGCTAGGTCTGTCCTTATGTCAGCATGTGTGTCTGGATTATTCCATAGTAGGATTTGCTAATGGCATTAGCATACTGTGATCTTATCCAATGATATAACATACAATTTAACTTATTTCAAGAAAAAAAATGGAAACGATAAAGGAAGGGTACTGTTGCCTTTGCCTGAATCCAAGTTTGCCAAAAACACCAGTGTGTGTCAATGACATGCCATACCCGACATCACCTGTCATTGTCGCAACACACGGTATTTTCATATAGGGCGATAAGGGGGCGGGCAATGGTATATTGGCGTTTCCCCCAAATTGATGAAGTTTTGGACTGAACTTAACAAAGGAGCAGGATCACAAGACCTCTGACTTATCATATTAAAGGGTTCACTTTATTTTTCAGTAAAATACACCTGCTGCATTTTGTAGAGCAGATGCTTAGCACAGCATTTATGTTGATCTCACCACAAGATTATCTAAACATGTTTGAGAATGCCTTTTGTTCAGGTTAACTGAAGGGGTGGTGCGCTCTGTAAATAACCTGCTCGAGAAGTTCCATCAATCGTTTTTCCTGTATTTCCTTACAGCCCCAAGCAAGTTCATTTCAGTTGGTGTATATATGATTCCGTTTGCATTACTCCTGGCACCCCTCCCAATAGTTGCTGCTGCTCTTGCTGGTGGTAGTAAAACCAAGGGGAAATTGGAGGATGAATGTAAAACAAAGGGTAATGCTGATGACCTGCAAATGGAGGGTGGATCGTGGAAATGGCTTAAATCTGCAAGAGTACTACTTATCATCCAATTTTGGGCAGTACTTGTTTCTTTACTCCCATACTACATTAGCCAAATTCCTGGTGCTATGCCAATACAGTATGCAGTGATTTGGGCCGTTCTCTCCATCACTATATTGATCATCCTGTATGCAATGTTTGGCTCTCCATCCCGTGCTGGTGTGGAATGGAAGCTTCTAAAAGCTACGATGATCACTTCCATCACCATAGGAATGGGGCTTATGTCGATCATAAATTTTGCTACTGCTCAGCTTGGGGCTCTGATATTGATCCCAATGTGCTTGTTTTCTCGACCGCTGAGGGCACAGCTCGAGATGAATTTCCTACCTCGCACAGTATTGTTGGCCTCAAACATACTTCTCACCGTCTTGGGTTTCCCTCCAGCTGCATTTCTTATCATGAAAGGTCTATCCAAGGGATCATGGACAGTAGACATTGTTGGTGATTTCTGGCTGTGGATGGAGTTCTTGTGGGAATGGAGCAGCGCGACATATCTGTATGTATTTCTTGTCCATCTTCCCTGCTGGCTCTTGTGCATCCATGTGTTGCTGCATCCATGCTACCAGCCTGAATCAAAGATGAAGCAGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001012