BGIOSGA001030

From RiceWiki
Revision as of 10:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001030| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001030, complete gene.| tag = OJ1117_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001030

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001030, complete gene.

LocusTag

OJ1117_G01.11-1

Ensembl Transcript ID

BGIOSGA001030-TA

Ensembl Protein ID

BGIOSGA001030-PA

Length

2622

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31041017..31043638

Sequence Coding Region

31042719..31043638,31041616..31041865,31041017..31041187

Genome Context

<gbrowseImage1> name=IndicaChromosome01:31041017..31043638 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:31041017..31043638 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCCGAAGGAATGCCGGGGCAATGCAGCGGGAGGGGTCAGTCAAGGACTGGGAGGAATTTGACCCCTCGCCGTCTCCCAAGCTGGCGTACTCGCAGTCCTATGTTGCAATGAGGGGGCTTCTGACATCGGTGGCCTCGCTGGACCTTGTCCTGATGTCGAGCAGCCTCAAGTCTGCTTGGGCAGCTATATCATCCCACAAGCATGCCCGGTCCTTGGAGAGGTCAAGGTCCAAGGGAATGAGCTTGAAGAGGGCCATGCTGCAGTTATTAGTGTGCTTCATGGTTGGTATCTTCATTGGGTTCACGCCACCCTTTTCCGTGGATCTACCAGGAAAGATAGCTTCTGAAAATGGGAGGCTTCCATTTGATGGGGATGCCATTGACAGAAGACAAATGGTAGAGCGTCAAGGCACCAAGTTGGAGCCATTCGTAGCCGAGGCTGAATCTGAAGCAAGCAGCGAGCCACAGGTTGAAGAGGGCCCACCAGTTCCTGCAATGTTGGATGACGAGGCGGACTTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGATTCTGGCATTGTTGTGAGGAAGCACCTGATAATTATTACAACAACCTCTGTTCGACCACACCAGGCATATTACTTAAATCGTTTGGCTCATGTGTTAAAAGATGTCCCGCCTCCTCTTCTGTGGATAGTGGCAGAGTGGCCATATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTCTGGGATCATGTACAGACATCTTATCTGCAATCGGAATACTACAAATATAAGGAAGATTGTTGTCTGCCAAAAGAATAATGCAATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGTGCATTTCGCTGATGAAGAGAGAGCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAATAAGGCGTTTTGGTACATGGCCAGTAGCAATACATGTTGGGACAAAGTACAGAGTGGTTCTAGAAGGCCCCGTTTGTAAGGGTAATCAAGTCACTGGATGGCATACAAATCAGAGAAGGGGTGTATCACGTCGATTTCCAATTGGTTTCTCTGGATTTGCTTTTAACAGCACTATACTTTGGGATCCTCAGAGATGGAACAGCCCCACTTTAGAGTCTATTATAGTCCATTCAGGTGGCAGAGGTGGCTTGCAGGAGTCAAGATTTATCGAGAAGCTTGTTGAGGACGAGAGTCAAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGTCTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTATGCCAATAACATAA</cdnaseq>

Protein Sequence

<aaseq>MSRRNAGAMQREGSVKDWEEFDPSPSPKLAYSQSYVAMRGLLTSVASLDLVLMSSSLKSAWAAISSHKHARSLERSRSKGMSLKRAMLQLLVCFMVGIFIGFTPPFSVDLPGKIASENGRLPFDGDAIDRRQMVERQGTKLEPFVAEAESEASSEPQVEEGPPVPAMLDDEADFVEASPIVHSVNDSGIVVRKHLIIITTTSVRPHQAYYLNRLAHVLKDVPPPLLWIVAEWPYQSRETAEILRSSGIMYRHLICNRNTTNIRKIVVCQKNNAIFHIKKHRLDGIVHFADEERAYSADLFEEMRKIRRFGTWPVAIHVGTKYRVVLEGPVCKGNQVTGWHTNQRRGVSRRFPIGFSGFAFNSTILWDPQRWNSPTLESIIVHSGGRGGLQESRFIEKLVEDESQMEGLGDNCTRVMVWNFELEPPQVNYPIGWLLQRNLDAVMPIT</aaseq>

Gene Sequence

<dnaseqindica>1..920#1774..2023#2452..2622#ATGTCCCGAAGGAATGCCGGGGCAATGCAGCGGGAGGGGTCAGTCAAGGACTGGGAGGAATTTGACCCCTCGCCGTCTCCCAAGCTGGCGTACTCGCAGTCCTATGTTGCAATGAGGGGGCTTCTGACATCGGTGGCCTCGCTGGACCTTGTCCTGATGTCGAGCAGCCTCAAGTCTGCTTGGGCAGCTATATCATCCCACAAGCATGCCCGGTCCTTGGAGAGGTCAAGGTCCAAGGGAATGAGCTTGAAGAGGGCCATGCTGCAGTTATTAGTGTGCTTCATGGTTGGTATCTTCATTGGGTTCACGCCACCCTTTTCCGTGGATCTACCAGGAAAGATAGCTTCTGAAAATGGGAGGCTTCCATTTGATGGGGATGCCATTGACAGAAGACAAATGGTAGAGCGTCAAGGCACCAAGTTGGAGCCATTCGTAGCCGAGGCTGAATCTGAAGCAAGCAGCGAGCCACAGGTTGAAGAGGGCCCACCAGTTCCTGCAATGTTGGATGACGAGGCGGACTTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGATTCTGGCATTGTTGTGAGGAAGCACCTGATAATTATTACAACAACCTCTGTTCGACCACACCAGGCATATTACTTAAATCGTTTGGCTCATGTGTTAAAAGATGTCCCGCCTCCTCTTCTGTGGATAGTGGCAGAGTGGCCATATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTCTGGGATCATGTACAGACATCTTATCTGCAATCGGAATACTACAAATATAAGGAAGATTGTTGTCTGCCAAAAGAATAATGCAATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGTGCATTTCGCTGATGAAGAGAGAGCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAATAAGGTGACAACCCTTTGCTAATACTTTCTTTTCTGCACCGGCATGTACTATGACCTTGTTTTTCATAAATTCCTGACAGAACCTAATAGTATAAATACTTTACCATTCCACCTTTAGTCATTAAGATTGTAGAAATTATTGTTTGTCTGGTTTTGCTGGGTCTCCTATTATTCATTTCATGTCAATGCTGTAAAATCTTTAACTACCTGCTGCATACGAAAACAAGGTGTCTATGATTGCTAGTTTCTACTGATTATTTTTAGTTGTCAAATCTATTGGTAAAGAGTAATTGTTTAAGTGCTAGTAAACTTTCCTCAGATATTCTCTAATCTCTAGTAGCTAAATATGCAAATTATTGGTTGGATGGTGATATGCTTTTTTTTTTTGTGGTGGAGTTTGGCGCGGACGCACTTTCTTGTTTTTTCCCTGTCATTCTGCTTTTGTCATTCTTCCTTTCCTGTACTTTTAAGTTTATTCTCGATATGCTCTGATGTTCCCTATATCTAAATGATGGTGCCCCAAAACATGGATTATTCTCAGCAATATAATATAGTGTGACACAGAGCTTTCTTATTTGCTTTCTCCACTATATAAAAGTTTGGTTGATGATCTCACTTCATTTTCTCTAAAGATATCTTAGTACCTTGTGTTTCAGTCATTTAAATTAAGTGCTTTCTGATGCAGAGATAAAAATTCGTTAGAGCCTTCTAGCCCAATAAATGAAATTTATGATGACTGCTACAACCACTGCAGTTGGATAAATCAATTCAGCTCAATAATTATGGCTTGATAGTCCCCACACAAAGATGGCATTGGCAGTTAACAGTTCCTAATGCTTTTGTCCTATGTTCTGCAGGCGTTTTGGTACATGGCCAGTAGCAATACATGTTGGGACAAAGTACAGAGTGGTTCTAGAAGGCCCCGTTTGTAAGGGTAATCAAGTCACTGGATGGCATACAAATCAGAGAAGGGGTGTATCACGTCGATTTCCAATTGGTTTCTCTGGATTTGCTTTTAACAGCACTATACTTTGGGATCCTCAGAGATGGAACAGCCCCACTTTAGAGTCTATTATAGTCCATTCAGGTGGCAGAGGTGGCTTGCAGGTGAGTTTTTTTAGTATTTATGTGTTCAAGCAGTTGAAAATACGTTTTCAATAAGCTGTGGAGCTTCTGTTGTCTGATATAAACTGAAACCGACTTCCTAATTTCTGCTTTACAAAGTTTTTTATCAGAATGTCTATCAAACTGTATTATTATGATTGTTATCCTAGTTAAACACGCCCTTTCAAGATCTGGTAAGCTCGGTTAACTTATTACACAATTATTGAGGTGAGGCAAATGCAACCATTGTGGTACCAGTTAGATCAAGTACATAAGACAAAGTGCTGTGAAGAACTAGTAACACATGGCAATTCCTTGTAAGTTTAGATACAACCATGAAATGGAAGCTAATATATAGTAGATAGGAAGTATCTCTTACTAGAAGCAACTCAAGAAGGTAGCAATCATACTGAAACATCTTGGCATTACAGGAGTCAAGATTTATCGAGAAGCTTGTTGAGGACGAGAGTCAAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGTCTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTATGCCAATAACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001030