Os11g0266000

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Revision as of 09:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0266000| Description = Protein of unknown function DUF1665 family protein| Version = NM_001074196.1 GI:115485040 GeneID:4350250| Length = 4...")
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Gene Name

Os11g0266000

Description

Protein of unknown function DUF1665 family protein

Version

NM_001074196.1 GI:115485040 GeneID:4350250

Length

4558 bp

Definition

Oryza sativa Japonica Group Os11g0266000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:9158427..9162984

Sequence Coding Region

9158611..9158673,9158766..9158858,9160624..9160718,9161317..9161377,9161899..9161918
,9162041..9162122,9162217..9162318,9162414..9162830

Expression

GEO Profiles:Os11g0266000

Genome Context

<gbrowseImage1> name=NC_008404:9158427..9162984 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:9158427..9162984 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccgccaccgccccgcagcctgtgtcctctccatccgccgcagccggcgccgcgtcgaacaacccccacaagcgcaagaagccggcggcgagggggaaggggaagggcaagggaaagggccgcctcgccaagacgcccaggcgctccgatgaccccggcgacctcccccgccgccgcagcaagcccagcgacaggttcctcaagctgctccgcaagcgcgcccgcgactacaactccgacgactccgacgacgaggagcgcctctcggatgaggacgaggaggaggagggggcttccggctccggtgacgacgaggccgccggcgcggtgaccaggttcgagcaggggtgccgcgcgttccgcgtcgccttcacgaagatcatggccaagaagctccccgacgacccactgggtccaattctttcggcgcacaagaagctggtcgccgccaagttggccgaggacgcagaagaacacaagcccaagggagaaggccgcagggaaaagcgcatggctgcagagaagggccatgtcattcccacaaatcatttagatagtaaagagaaggagctcatcaaaatcgcaacccaaggggtcgtcaggttgttcaactcggtaagcaaggcgcagaattgtcggaaaggtttgaacccatcaaggagtaaagacgccaaagtgttggcaaaagaaacaaagcaggccttcctcacagaattaagcaaaacatctaaccaaagtcaaaagggcaaggcatcttccaacttttctaagaacaatagcaaagacgaagacgaacctgggtgggcacccctacgcgagacatacatgcttgggtcgaaattgaaagattgggataaaatgcagacctctgatgttgtgaatgaacaaacggagatccctttggacgactcttctgatgaggaatag</cdnaseq>

Protein Sequence

<aaseq>MASATAPQPVSSPSAAAGAASNNPHKRKKPAARGKGKGKGKGRL AKTPRRSDDPGDLPRRRSKPSDRFLKLLRKRARDYNSDDSDDEERLSDEDEEEEGASG SGDDEAAGAVTRFEQGCRAFRVAFTKIMAKKLPDDPLGPILSAHKKLVAAKLAEDAEE HKPKGEGRREKRMAAEKGHVIPTNHLDSKEKELIKIATQGVVRLFNSVSKAQNCRKGL NPSRSKDAKVLAKETKQAFLTELSKTSNQSQKGKASSNFSKNNSKDEDEPGWAPLRET YMLGSKLKDWDKMQTSDVVNEQTEIPLDDSSDEE</aaseq>

Gene Sequence

<dnaseqindica>4312..4374#4127..4219#2267..2361#1608..1668#1067..1086#863..944#667..768#155..571#gccgccgcctcctcccttcctctcttctttcctcgccgacgacgcgattccccaccggcgtacggcggcggcggcggcgagggatttcgccggccagctagccccatcctcaacaaaatcgaggggtcggttgctctcccggtggaagagccccatggcctccgccaccgccccgcagcctgtgtcctctccatccgccgcagccggcgccgcgtcgaacaacccccacaagcgcaagaagccggcggcgagggggaaggggaagggcaagggaaagggccgcctcgccaagacgcccaggcgctccgatgaccccggcgacctcccccgccgccgcagcaagcccagcgacaggttcctcaagctgctccgcaagcgcgcccgcgactacaactccgacgactccgacgacgaggagcgcctctcggatgaggacgaggaggaggagggggcttccggctccggtgacgacgaggccgccggcgcggtgaccaggttcgagcaggggtgccgcgcgttccgcgtcgccttcacgaagatcatggccaagaagctccccgacgacccactggttcgatccatctctctctacaaaagaagaataatgcttttcttttctttacttttcttttcaatggactgatgaatttcgcgccgccgcattagggtccaattctttcggcgcacaagaagctggtcgccgccaagttggccgaggacgcagaagaacacaagcccaagggagaaggccgcagggaaaagcgcatggtacggcttgtttcgctcgataatttctacatccccttgtagaagtttctgtgctgaaatgctgaattggattgaatgcgtttgatttgcttaggctgcagagaagggccatgtcattcccacaaatcatttagatagtaaagagaaggagctcatcaaaatcgcaacccaagggggtaatcttctgttttctactctgttattttgcatatcacaaactacatattatttgttagctaattggatgcctctcctgttgattttttttacaccgattgtcttgctgctggtgattcagtcgtcaggttgttcaactcggtaagcacacggctatcttatattttcgtgaagtatgcatgtatagctttttacatcatggttctttgttttactgagcttcgactgaccctacaatggtgaaaccttattgtctccttgtttatcctgccattctgcttataacgtcacactgaggctcagttactctccatatcataggatacatcaagctttccatgatacagatgtatctcatatttgtttatttttgaagacagctcttgcttgtcttcttagtttttattactgaagtacattgaagaaagaaaattttaattttactgctgtaaagcacatttaattctgtatttacctacttagcacagtgaaaatgtatatgtgaggtgctttcgaagctttatattgaatatttgatgagcttgtgttaagggaacacactcacggacatgtgcatgtaccttttccatgtaatagcaggactaataaaatagcagctatttgatgattgatttgataggcctttactttattccttccaggtaagcaaggcgcagaattgtcggaaaggtttgaacccatcaaggagtaaagacgccaaaggtgtgttggtttacttaccatgtaatccatcattctacctctaataatttaggaacctgttgtgactaggttgatagtttggattttagacttcaaaaaatcaataaatatgaaagaaatcgattctacatttatgaaaaagtaaaactactggttcagcatgtactctttattcattggatggtgcattttctttgcatccttgatggtgcattttctttgcatccttcctccctactagttagcctgataaaaacaacgagtgttggggcgttacatctaaaaaataaaaggtgggagacacacaagagtgcaagactactatcaactcaagatggtttgaataggacctctttgtttatgtgcttctgactgcatgaaatacctccttttgtttgacacaaaatgcggaagttaagcataattgaggccagctggaaacaccatgtgtcatgatcttttcattgacagcaaatactatcatatgacattgtcattctgcacaccgtacttatgttttgtattttattttgatgtatatatgcatttttttgctactaacgaaaatattctgaacattttgtgttaatcctaacagtgttggcaaaagaaacaaagcaggccttcctcacagaattaagcaaaacatctaaccaaagtcaaaagggcaaggcatcttccaacttttctaaggtagctatgataattctctctttactcaaaaacactccatttcattttatagacttctgttgctaagtatttgtgttgtatcttcaaattcaaattagttgttctcagaggcatatctggtggaactgttgttcaaattagttatgctaaatttgatgcaaattacagcctcaaataaatcaaaacggacaactgcaatacaagatgttgcgtgacagaagacaatagcaattattttttgacatcaagaccgtagcaattaaagtaacctcaacgtgcaaatacacttcattgtccaaatgtattagttgatagctgtagtgcttgacatattgtccattatgcgatttaacatgagaattgaaatcgtctagcaaagtcaccccaaattttgttgtgcacttgaatcgtgcccagtgttgttaaggcggtttaaggcgacccaccactgccttagcgccatagcgctgaggcgtaacattgcgacgccttatgagatgattgaggcgtgattagtggaggatatggtagagaaattaggaagaaaaaaaaaggaaattggtaaaaggcccactaagccaggcaaccagcccaccaaagaccaacattagtcttcatacccacgtgttttatgccctaagagacatcgtacaccaccaggcaccagccgccatgacgagaagaggcaccagccgccatcaatgtctctggccgcttcttctttctctttctctacaagccaactaggttccatgatgagcttacctcttcttcctttcctttctctactggtttttcctgttctttccctttctctactcgttttgcctctaaggtggaggaaacataaggcggagtggacgccttgacctccgcaaccgccttactgctacagcgacgccttaacaaccatgatcgtgccgatggtattgtggacacatcataatctagttcaatctgtgtgaaacccctctatgtaaggggctctttttgtttcggtacagagtttcgattctattttgtgtcgggcagcacctttctattgacaccgtcgatgtgttgttatagtactgcccattcagtatctcagctgtctgtctcccacgtctattcattgcatccagaaatgacatgatgctacttttttgaagtttcaaatttgaaaaaaatggattttccttgagccataaggcaataagagatgttgattaatttagtggtaatctaaatcataataataagttccggatgttgattgggtctagtaagcgaccagctcattagtccaattagttcagtagctcaagggagtagattcatgttttattttaagatttggtagtaaggtgggtcttgtgctaaacttgaggtaatgagggggcaacataggtcttcaacacatctatttacagttggagggatttcatatgagggagtgttcaacaatgagtaaatctgacatcatttaaataagcacccgtatcctcagcattagcattaagaatatacgtgttaagaatatacaagttggactgtgtttctgtatgtgtacctgtgattcatcagatatataataaactatctactgtttctcatgccataagttaactaaatcagatgtaaaatgatttaacctgtgacaagttggctgctcttgtgcgccatatctgaatttcattttatttcggaacatattttatacatatttttatgtatttggaacttaagaagctcttggatatttctcacacttgatgtgcttcagaacaatagcaaagacgaagacgaacctgggtgggcacccctacgcgagacatacatgcttgggtcgaaattgaaagattgggataaaatgcaggtaaagcctcctgatttagcattatttgcattaggcgacactggtaactcctttgcctgaagatctaactaaactttctattcaatgagtagacctctgatgttgtgaatgaacaaacggagatccctttggacgactcttctgatgaggaataggcaatagattcacctgagtgagttgaagcagcatttgggacaatgttcctgtgctttgaagtcgtgttcttgttattgacattgtaaagcgatatttggttcaaatttgcaagttaagttttcttatcattgtttcatgcattgatgaatgtgatggctaatgcacggcacgggcaagttgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0266000, RefSeq:Os11g0266000