BGIOSGA001057

From RiceWiki
Revision as of 10:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001057| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001057, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001057

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001057, complete gene.

LocusTag

OSJNBB0063G05.28-2

Ensembl Transcript ID

BGIOSGA001057-TA

Ensembl Protein ID

BGIOSGA001057-PA

Length

3820

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30612926..30616745

Sequence Coding Region

30615926..30616745,30615378..30615718,30613912..30614010,30613659..30613823,30612926..30613072

Genome Context

<gbrowseImage1> name=IndicaChromosome01:30612926..30616745 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:30612926..30616745 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATATAGAAATACGGTATGCGCTCCCCAAGTAATTGATCTAGAAACTGAACAAGGGCACTCTCATATTCATTCTGAAAGTTTTAATCGCACTGGGAATGATTCATCTGACCAAGGTGCACAACATGCTGTCAGAGGGGTAGGAAATGCTACAAACATTGGTCTATCTGATATGCGAAGTTACTATGATGCGGGCATGAACCATCCACATCAACCTGTTCATAACTTGCCTCCAAATTTAGGAGTTGATTCAGGTTTTGTCTTCCCATCCAGTATGTACAACCCCTGCATGTCGACAACATCTATGAACCAATATGTTTCTCACACTCAGAGCTTCGGATTGCCATCAAACCAAGTTGTTCTAGGAAGCATGGATGAAGGTAGCAGAAATGAAAATGCTGGTGAAAGTGCTAGAGGATTCATTAAAAGGAAAAATGCTGCAGTTGCAGGAAGTTACCACTGTGCTAATGGATTTGCAAGTTCAAGCTCTTCTCATGCATCTCTGAATCCTACACGTAGGCCATGGGATCCTTCTTTTGAGTCAAATGTTTTGCCTAACACTGCATCATATAACCCATCAGAGTACCATAGCCAGACCAGTTGGCCATCTATGGAAGGATCTTCCATTCCCAGTAATGGCTTTAATTTGATGGGTGCTCACCCAGAATCAGCACAGCATGGTAATTATGCATTTCCAACTAGTCACATCAGCCAGTGCTTTCAACCTACTAGCAATACATGGATTTCCCAGTCTGCAAATGGTATTGCTGATGGAATACCACAGTGGGAATATGTCAATGGAATGAATAATGCTCCAGGCAGATTTTCCCGTTCAGGTATGACAGAAACAGTGAATGGAAGCTTCCGTGAATATCAGAATGGCCCTTCAACCTTATGTCGAGGGCCTTTACCCTATTTTCATCAGCATGCTGGCATGCATGCTCATAATCTGCTTGATCATACACAAGTGCAAGCTCCTTACCAACAATGCCACAATAATCCTGTCTTACATGGTGTAAATCATTCTGGCAACCGGTTCCATTTGGGTCCAAGGATTCCAGTTCTTTTCTCTAATTCTGAACGTACTTTTGGGCCTCCACATCATCCACTCTTGGCAAATCCAGTGAACCACAGAAATATACGAATCCTGCCACCTGAGCATGCTACAATAATGGATTTTTCAAGATTGTATGAAGTGTCAAATGTTGTAGATGAGCATAGAGATATGCGGCTAGATATAGACAGCATGACATATGAGGAGCTTTTAGCATTAGAAGAGCAGATTGGAGATGTAAATACTGGTCTGGCAAAAAGCTACATTGTAGAGAAATTGAAGACTAGCTTATTTGTGCCAGGATCATCCTGCATGTCTAATAAGTCTTCTGAATCTTCCATGGAGAATGATGCTTGCATAATATGCCAGGAAGAGTATCAGGTTAAAGAATGCATTGGAACCCTTGACTGTGGCCACAGGTACCACGAAGATTGCATAAAACAATGGTTGATGGTAAAGAATTTATGCCCCATCTGCAAGACGACAGCTTTGTCAACCGGAAGAAGAAGTGGATAA</cdnaseq>

Protein Sequence

<aaseq>MAYRNTVCAPQVIDLETEQGHSHIHSESFNRTGNDSSDQGAQHAVRGVGNATNIGLSDMRSYYDAGMNHPHQPVHNLPPNLGVDSGFVFPSSMYNPCMSTTSMNQYVSHTQSFGLPSNQVVLGSMDEGSRNENAGESARGFIKRKNAAVAGSYHCANGFASSSSSHASLNPTRRPWDPSFESNVLPNTASYNPSEYHSQTSWPSMEGSSIPSNGFNLMGAHPESAQHGNYAFPTSHISQCFQPTSNTWISQSANGIADGIPQWEYVNGMNNAPGRFSRSGMTETVNGSFREYQNGPSTLCRGPLPYFHQHAGMHAHNLLDHTQVQAPYQQCHNNPVLHGVNHSGNRFHLGPRIPVLFSNSERTFGPPHHPLLANPVNHRNIRILPPEHATIMDFSRLYEVSNVVDEHRDMRLDIDSMTYEELLALEEQIGDVNTGLAKSYIVEKLKTSLFVPGSSCMSNKSSESSMENDACIICQEEYQVKECIGTLDCGHRYHEDCIKQWLMVKNLCPICKTTALSTGRRSG</aaseq>

Gene Sequence

<dnaseqindica>1..820#1028..1368#2736..2834#2923..3087#3674..3820#ATGGCATATAGAAATACGGTATGCGCTCCCCAAGTAATTGATCTAGAAACTGAACAAGGGCACTCTCATATTCATTCTGAAAGTTTTAATCGCACTGGGAATGATTCATCTGACCAAGGTGCACAACATGCTGTCAGAGGGGTAGGAAATGCTACAAACATTGGTCTATCTGATATGCGAAGTTACTATGATGCGGGCATGAACCATCCACATCAACCTGTTCATAACTTGCCTCCAAATTTAGGAGTTGATTCAGGTTTTGTCTTCCCATCCAGTATGTACAACCCCTGCATGTCGACAACATCTATGAACCAATATGTTTCTCACACTCAGAGCTTCGGATTGCCATCAAACCAAGTTGTTCTAGGAAGCATGGATGAAGGTAGCAGAAATGAAAATGCTGGTGAAAGTGCTAGAGGATTCATTAAAAGGAAAAATGCTGCAGTTGCAGGAAGTTACCACTGTGCTAATGGATTTGCAAGTTCAAGCTCTTCTCATGCATCTCTGAATCCTACACGTAGGCCATGGGATCCTTCTTTTGAGTCAAATGTTTTGCCTAACACTGCATCATATAACCCATCAGAGTACCATAGCCAGACCAGTTGGCCATCTATGGAAGGATCTTCCATTCCCAGTAATGGCTTTAATTTGATGGGTGCTCACCCAGAATCAGCACAGCATGGTAATTATGCATTTCCAACTAGTCACATCAGCCAGTGCTTTCAACCTACTAGCAATACATGGATTTCCCAGTCTGCAAATGGTATTGCTGATGGAATACCACAGTGGGAATATGTCAATGGAATGAATAATGCTCCAGGTAACTTTTCGTTTGATCCTTAGATCGTCATCAATTTATTTCCTTCTTTCTAATGACTTGAATAGTTGTTCAATGTGCCTTGATGTCTGGACTAGTGGTTTAGCTTGCATGGTAAGAGTGGCGAAAATTTCAAAAAATGTCTCCACCTACAGAATGAACTTATGTGTTCACACTAGGAGTAATTGGAAACCTTTATGCTTTCAGCAGGCAGATTTTCCCGTTCAGGTATGACAGAAACAGTGAATGGAAGCTTCCGTGAATATCAGAATGGCCCTTCAACCTTATGTCGAGGGCCTTTACCCTATTTTCATCAGCATGCTGGCATGCATGCTCATAATCTGCTTGATCATACACAAGTGCAAGCTCCTTACCAACAATGCCACAATAATCCTGTCTTACATGGTGTAAATCATTCTGGCAACCGGTTCCATTTGGGTCCAAGGATTCCAGTTCTTTTCTCTAATTCTGAACGTACTTTTGGGCCTCCACATCATCCACTCTTGGCAAATCCAGTGAACCACAGAAATATACGAATCCTGCCACCTGAGGTTAGTTTGTACTTCACTTTGTGTCCCTATGATTTGCGATGTGCAATAATTATTTGGGTTGCTGGCTGTTTGACTTATTTGACAATTTTATCTGTGTAGTGAGCTCTCTTCCTGTTAGGGGAAAGTTTGAGACTCTTGTAGCAATTTGGCATATGAACCTGTACATTACTTCTTAAATGCCTTTGATGTGCTAACATCTATATTTTCACAAAACTACATACTTCAAATGAAGAAGATCAACCTTATACTTTCAAACTATTTCACGAAACTACTTCGTTAGTTCGCATTCTCTTTTAAAGTGTAGTTTTCTGAAATGCCATTCTTTGGTAGTTTTTGCATTAGTACTAGTAGTATAGTTTTATGATATCCACAGTCCACTTGACTCTAGCTCAATCCGCATTACATCCCTCAAATATCTGTTTGTCGAAAAAATACCCCTGAACAATGAAACTGGACATTTTACACCGAAACCGGTGAAAATACCCCCCCCCCCCCCCCCCCGGGCGCGAAAGGCAATTCAACCCGGTTTTTATTGGTGGTTTTCATTATTTTAATATCCAAATAGTACCCTTTACTTGTATGCCACCTAGTTAGCAAGAGATGTAAAAAGTTGAATCTAAGTAAAAAAAAATGATGTGAATATCATGAAAACCACTATTAAAACCAGGTTATATTGTTCTTTTTTTTTTTGTTTGGGGGGGGGGGGATGGTATTTTGATCGATTTCGATCGTTACAGGGGTGTTAAAAATGTCAGGTTTCATAGTTGAGGGTATCTTTTAGACAAACCCGATAATATTGAGGGGTGTAATATGTTCACTTCTTTGTTATTGATTATTACTCAATCTACAGATATTGTTCTTTTACTTTCCACGAGCACTGGTGCAGGACTTTGACTATTTTTTGTCTTAATATACTGTCAATAATAATAAAACCATATTGTTTGGATCCCGGTGCGGCCTATATTTATATAGTGAATGTGATCTATTGAACCACTTAAGGAGTGTATGTTAGATAAGTTGAATTTTTTTTATACATGTATGTTTGTATGCTTAAGGGTTAGGTTTTTTGTTTTTTGTTTTTTTTTTTTTACTGAGACAGTGGTTTTCAGCATTTACAGACATCGCATTATCTATGTTAATGCATTTCTAGTCAAAGGAAACAGTACTTGTATATTTTTCATTTTATCTGCATGTTGAATTACTTCCTGTTTCCTGCTGCCATTAGTCCATTTGTTGGGAATTAAGACATATTTGCCCTTGGTTCAGGCTGTTCATATTGCAGTAGAATGTAGGTCACGTTAAACACCTTGCTCTTCAATTCTATATCACACACTCAAAATTGATATATTTTTTCTTCGGTGCTGCAGCATGCTACAATAATGGATTTTTCAAGATTGTATGAAGTGTCAAATGTTGTAGATGAGCATAGAGATATGCGGCTAGATATAGACAGCATGACATATGAGGTATGGATCCCAGCTTATTTAGGTCACCTTTTTTTAGTTCTGTCCACAGCAGGCTTTATCTGATTTATTCTTTTTATTTGCATTACAGGAGCTTTTAGCATTAGAAGAGCAGATTGGAGATGTAAATACTGGTCTGGCAAAAAGCTACATTGTAGAGAAATTGAAGACTAGCTTATTTGTGCCAGGATCATCCTGCATGTCTAATAAGTCTTCTGAATCTTCCATGGAGAATGATGCTTGCATAATATGCCAGGTCCTTCTCTTTCACTATTATTTTCAGATTAGTTTTGAAATATAATAGCTTATGCATTTCCTGGGACAACTAAACCTAGCTTTCGAACGGTCTGGACTTTACACTTTTGGATCCAAAGTTATGGTTAAAGCTTGCAGTGTGGAATTGGCTAGTGTTATATCATAGTAATATGCAACGTTCCATTTTATCACCCATAAAGTATGGTTCCAACAGGTGGGAAAACTTACAAGAGAATTGGTTTATGTAAGATGTACTATGATTTCTAAGTATATGCAGTGTAAATTAGTATTTGCAAAGGTGGACAGGTCCACGGTGCTCAAATTGTATAAAGTTACTTGAGAGTACGTCTTGGTAAATATCATTCATGATTTCTTGTCAGGCGCTTAAGGAATTTGAATGGGTGTTAAGAGGGACAAGTGTGGGTTGCTAAAACAAGCCATAAGTTCCAATTGGGCTTAGAAAAACAAATACTATTGCACTGGTTCCTTATCTGCATTATCAGATTATGTAGTTTTCTCATCCACCAACATTTAGTCTAGTCAAATCGACATATCCTTGTTCTAAAAATCTTTTCTTGGTATTGCAGGAAGAGTATCAGGTTAAAGAATGCATTGGAACCCTTGACTGTGGCCACAGGTACCACGAAGATTGCATAAAACAATGGTTGATGGTAAAGAATTTATGCCCCATCTGCAAGACGACAGCTTTGTCAACCGGAAGAAGAAGTGGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001057