Os09g0327000

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0327000| Description = Protein of unknown function DUF599 family protein| Version = NM_001069421.2 GI:297609249 GeneID:4346743| Length = 35...")
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Gene Name

Os09g0327000

Description

Protein of unknown function DUF599 family protein

Version

NM_001069421.2 GI:297609249 GeneID:4346743

Length

3552 bp

Definition

Oryza sativa Japonica Group Os09g0327000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10204577..10208128

Sequence Coding Region

10204577..10204795,10204892..10204962,10205588..10205678,10205884..10205893,10206358..10206425
,10207257..10207409,10207493..10208128

Expression

GEO Profiles:Os09g0327000

Genome Context

<gbrowseImage1> name=NC_008402:10204577..10208128 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:10204577..10208128 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagaaacctggaattccaggttgtggtgttctcatgttgtgccttgcatggaaactcctgaaaaatctttcagtttaccagtgcttccgacatctcaacaaggtgctcacgccaacattttccggtccagacttgcaagttcccaacatatctgtcatggacttcccacctggtaaattgttactagtaaacattcttgcctttctattcatcgagagactgcttttacaggacaagaagctttctactagtttctatatacagctgaacatgtggacgcctaaaagaaacaagctcaaaatctgtggatggatcatggatatgagcaaaaatcttgaagagaccctcttggtgaatgaacgtaacatggataagaacagtttgaaaggtgcgattgatcatgaggcatgcagctcagtagtgggccggacagcccaaaccatgcacaactgcaagagctccatggatttggtgctcgtcccatgcgggctggcgatcatggtcggctaccacctcatgctcctccaccggattctccgccacccgcacaccaccgtgatcggctacgagaatcacaacaagctcgcctgggtggagcgcatgctgcaggcggcggcgccggaggagtcggcgctggcgctgggcgtgatctcggacaacatctcggcggcgacgacgctggcgtcgctgtgcatcgcgctgggctcgctgatcggcgcgtgggtgagcagctcgccggcgccgggcgccgcgggcgtcgtcgtcctcggctacggcgacggcagccacgcgacggcgacggtgaagtgcgtcgcgctcctcgcctgcttcctcgcctccttcacctgcttcatccagtcggcgcggtacttcgtgcacgcgagcttcctcatgagcgcgctcgccggcgacgcggcgccgccggtgggcgacgcgcagcgcgccgtggtccgcggcggcaacttctgggcggcggggctccgcgcgctctacctcgccacggcgctgctcatgtgggtgttcggccccgtcccgatgctcgcctgctccgtgctcaccgtcgccgcgctccaccgcctcgacgccaactccatgccgctgcaccaccaccggttcacggcgaggagcacggacgcgtcgccggcgacggcgccggtggccgccgcgagatcagccgtggcaaggggaggcagagcaggcaatggcaacacggtggcgttctccacggctacatttctttgctga</cdnaseq>

Protein Sequence

<aaseq>MQKPGIPGCGVLMLCLAWKLLKNLSVYQCFRHLNKVLTPTFSGP DLQVPNISVMDFPPGKLLLVNILAFLFIERLLLQDKKLSTSFYIQLNMWTPKRNKLKI CGWIMDMSKNLEETLLVNERNMDKNSLKGAIDHEACSSVVGRTAQTMHNCKSSMDLVL VPCGLAIMVGYHLMLLHRILRHPHTTVIGYENHNKLAWVERMLQAAAPEESALALGVI SDNISAATTLASLCIALGSLIGAWVSSSPAPGAAGVVVLGYGDGSHATATVKCVALLA CFLASFTCFIQSARYFVHASFLMSALAGDAAPPVGDAQRAVVRGGNFWAAGLRALYLA TALLMWVFGPVPMLACSVLTVAALHRLDANSMPLHHHRFTARSTDASPATAPVAAARS AVARGGRAGNGNTVAFSTATFLC</aaseq>

Gene Sequence

<dnaseqindica>1..219#316..386#1012..1102#1308..1317#1782..1849#2681..2833#2917..3552#atgcagaaacctggaattccaggttgtggtgttctcatgttgtgccttgcatggaaactcctgaaaaatctttcagtttaccagtgcttccgacatctcaacaaggtgctcacgccaacattttccggtccagacttgcaagttcccaacatatctgtcatggacttcccacctggtaaattgttactagtaaacattcttgcctttctattcatcgaggtagccagtaatccgggatctacaagaaggggaataactggaacatacaattctcctgaactccataagtgaacatacacactctgcaacatccagagactgcttttacaggacaagaagctttctactagtttctatatacagctgaacatgtggacgcctaaaaggtaaactgcattagtgccgtacaaaattatagatataggatgcaagaatatatgtatatagaaatttgagaggttcaattagcctcaatcattttgatcaacagaggtaatatactttccttatatttcattgcatggtgatgaccaacttaaagaatgtggaacaactaaataccccccctgaaatacaaccaatcttaattttacacatatataccaggtaagtgataacacaccttctgcttcccacacaaagttcctgaaatgaatcgagtataccgctagagataataacggaggcgacagatatgcaaagcgagtcagtcacatgtcagtactggagaagcttagttcttgttatgatccggctgttcttgtcactgggccattattatgtctcctgaccaaccgggatctttaatggtatttcacaaattgtactacatccaatgtctccgaacttcaactgaagctagtagaatacaacagaaatcttttctgaattcacgattttctcgttcctttccaaacattctcgagtatatttgtaccaatatgtgggtataaaatatcagtatatgtacttccaaattttaatccatttcctctcgatgtccctttttagaaacaagctcaaaatctgtggatggatcatggatatgagcaaaaatcttgaagagaccctcttggtgaatgaacgtaacatggataagaacgtaattgtccttcataataacagacatttccattcaaatagtaattttttaaaaggctcagggaagcaataaaggaacaaaaatccaattaaatcaagccgtcatagatttgccactggccccttcttgcgagagtaagagggcaacatcataggtgtgcatctgtgcatcatccgtgcaatcggaaaaaaatgtttgcttgtagagtttgaaaggtaaactatattaaattaatttgcttaataacttcaactgtcctaagtccttgcatattagaaaaactaaacccaaatattgtaatgtgggattgctcgtacatttgtcgacaaatttccctaaaaaaattgtaattatattgtaacttgcatataactcgtatataacttttaaaaatacctcattaacatattattttcgtaaagtggaggaccaaatcctatcatatgtgcgcacgctgtgatttttttctttctcgcttgcatatataagatttaaagcaaatataacggtttaaaattatgtgaaagttacatacaagttataatgtaattacactatgatcgtatatttacatttgtcaaattttaggaagaaaatttatcgataaatatatagcaaaatcgctgtaatgtaggaaaaacctcttgtttaattgaccgcattgggccttgggatacaggtgcgattgatcatgaggcatgcagctcagtagtgggccggacagcccaaaccatgcacaactgcaaggtataaaggacttgtttagattgttaccaaaataaatcttaccaaattttggcattaccaattttggcaggatttagtaacaaacaaaacgtaagcatttttttggcaactttacaaaaaaaatggtatggttgaaaatggcatcaatctgaacagccccaaactttttatccatgcacaaatacccccctttgtgagatttccccctaattttagagccaaagtattgcagcacatgcacgagaaaaaaaataaaatacgaaaaaaagtaccaaatttggattcatgcagctggcttagcttgaggaagtccattaagaaattattctttcttgtaatcccatgttgcttttaagtgcaagcaaaagccactctctcctaactgcaaagtacagtttttgtttttttcctcctccttttgagatggtgcaaacattgcataggatgaaattttcatcttgtcattttctcttgcatccaaagccacaacaatagtttttttctgctgagacccacaagcaactactatcaagtatcacggacagaatgaaaacgagagtgcccattaccaagttaacacaaattaattgacctaacaatctaagcaatggcaagtacagtttgtacacattctgtccatcgtgttgcaatcatgccagagaaagggagcaagatcgaatcaagataagagtagaagagaagaacagcaagattcagcaactaaaaattagctatagagctaagctagctaggtagaggttaattgatatataggttgagaaattgagagacagaaattgaggtagtcagttcatgatgcttgttgacaagagctccatggatttggtgctcgtcccatgcgggctggcgatcatggtcggctaccacctcatgctcctccaccggattctccgccacccgcacaccaccgtgatcggctacgagaatcacaacaagctcgcctgggtggagcgcatgctgcaggttcatcatcttgttcgatcaattcaatttgtttgttcaagaactgatcaatggtgacgaaagattctagtggtttcttgcaggcggcggcgccggaggagtcggcgctggcgctgggcgtgatctcggacaacatctcggcggcgacgacgctggcgtcgctgtgcatcgcgctgggctcgctgatcggcgcgtgggtgagcagctcgccggcgccgggcgccgcgggcgtcgtcgtcctcggctacggcgacggcagccacgcgacggcgacggtgaagtgcgtcgcgctcctcgcctgcttcctcgcctccttcacctgcttcatccagtcggcgcggtacttcgtgcacgcgagcttcctcatgagcgcgctcgccggcgacgcggcgccgccggtgggcgacgcgcagcgcgccgtggtccgcggcggcaacttctgggcggcggggctccgcgcgctctacctcgccacggcgctgctcatgtgggtgttcggccccgtcccgatgctcgcctgctccgtgctcaccgtcgccgcgctccaccgcctcgacgccaactccatgccgctgcaccaccaccggttcacggcgaggagcacggacgcgtcgccggcgacggcgccggtggccgccgcgagatcagccgtggcaaggggaggcagagcaggcaatggcaacacggtggcgttctccacggctacatttctttgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0327000, RefSeq:Os09g0327000