BGIOSGA001079

From RiceWiki
Revision as of 10:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001079| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001079, complete gene.| tag = P0671D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001079

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001079, complete gene.

LocusTag

P0671D01.28

Ensembl Transcript ID

BGIOSGA001079-TA

Ensembl Protein ID

BGIOSGA001079-PA

Length

2563

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30231180..30233742

Sequence Coding Region

30233430..30233742,30232049..30232103,30231180..30231327

Genome Context

<gbrowseImage1> name=IndicaChromosome01:30231180..30233742 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:30231180..30233742 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCGCGCGGGAGGGAGGCGGCTCTTGGCCCCCGGGCTCCGGCGGGTCCTCGGCGGCGGGGCGGCCGCTCCGGTGGCCGTGGGCGGGGCGAGGGCGTACCACGAGCGGGTGGTGGACCACTACGAGAACCCGCGGAACGTGGGGTCGTTCGAGAACGACGACCCCAGCGTCGGGACGGGGCTGGTGGGGGCGCCGGCCTGCGGCGACGTGATGAAGCTGCAGATCCGCGTCGACGAGAGCTCCGGCAAGATCGTCGACGCATGCTTCAAGACCTTTGGGTGCGGATCCGCCATCGCGTCCTCCTCCGTCGCTACTGAATGGGTAAAGGGCAAGCAAATGGAGGAAGTAGTGACTATAAAAAACACTGAGATTGCCAAGCACTTGTCACTTCCACCAGTAAAGCTCCATTGTAGCATGCTTGCTGAGGATGCAATTAAAGCTGCCGTGAAAGACTATGAAGCAAAGAAGGCAAAGCTAGCACAAAAGGGTGAAGAGAAGGCTGCCGAAGCATGA</cdnaseq>

Protein Sequence

<aaseq>MLRAGGRRLLAPGLRRVLGGGAAAPVAVGGARAYHERVVDHYENPRNVGSFENDDPSVGTGLVGAPACGDVMKLQIRVDESSGKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVVTIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKKAKLAQKGEEKAAEA</aaseq>

Gene Sequence

<dnaseqindica>1..313#1640..1694#2416..2563#ATGCTGCGCGCGGGAGGGAGGCGGCTCTTGGCCCCCGGGCTCCGGCGGGTCCTCGGCGGCGGGGCGGCCGCTCCGGTGGCCGTGGGCGGGGCGAGGGCGTACCACGAGCGGGTGGTGGACCACTACGAGAACCCGCGGAACGTGGGGTCGTTCGAGAACGACGACCCCAGCGTCGGGACGGGGCTGGTGGGGGCGCCGGCCTGCGGCGACGTGATGAAGCTGCAGATCCGCGTCGACGAGAGCTCCGGCAAGATCGTCGACGCATGCTTCAAGACCTTTGGGTGCGGATCCGCCATCGCGTCCTCCTCCGTCGGTGAGCCCCTCAACCCCAACTATTCCCCTACCTGTTCCCCCCACCTTCCCTTGGATGATATGGTTTAGGCTTCGTTTTCGTCTTCGTGAGGTTTTCTGTATTTTTCAATTGTTGGGCCATTTGCCAACGATGAGAAATTGTCGGAACGTACGAGGAAGGATTGTGATTTGCTTTGTAGTATGATAGGGAAATTCCGGGGGCCAATTCTGAGCGTGAGATATAGCTACATGAGATGCTTGTTGAAACAGGAAGGCTGTTTGGATCAGTGTAGGAATTATAGTACTAACAGCAATATTTTTTGTGTCTGTGTCCAATAGCTGCCTGTGTTTTTTCACCTTAGAAATCATGTTCAATTCAAATATATTCAATGTAATGTTATCTTGATTTGGTGCAGAGAGTATTAATACTATGTGTATGTTGTAAACCTGTGGAGGCAGATGTGGTTGATTAATCCTGGGTTTAATTTGATTGAGTTATGTTAATTTGGTGGTCTAGGGTAGATGTGGTTGATTAATCCTGGGTTTAATTTGATTGAGTTATGTTAATTTGGTGGTCTAGGGTAGATGTGGTTGATTAGTCCTGGGTTTAATTTGATAAGTATGTTGTTTTGGTGGTCTAGGGCTAAGGTGCTCGTTCTGCTTGTCTGGTACAAGCGGTTACTGTTTTCAGATGCTCCCCTCCCCCTAATGATTTTCTGTTTTGGTGAGCTTATACTTATGGGATTATTTGTCCTAATTAGTAGCATTGAAAGTTTTTACATTTCCCAAGTTGTATGTCCTAAACGAAATTTGACATGATTGGGCCCCACCACTGAACAAACAACTTGAGAAAGGTGTATTATCGGTGAAATACTTTTGATAGTCAGCAGCTCAAACTGTTCTCAAGATGATCGCAATTTTGTGGAAGAAAACAGAAGAGTCTTTACAGAATTGCTATTTATGTTATGTGCATTATTCTGTTGTGAGGCGAATTCCTGTATGTAACTTTATTCATGTTATGTTACGGCAAATGTCGCCATGATATGATGCATACTGTATGTATTGTTTGCTAGTTATAAGCCAAAAACTAGAACCAATTGCAGCTTGAGGTTAATATTAACTTACTTTAATGCATTTGCATATTTTCCACATGAAAATCATCATGTTCAGATGCCTGGAGTTCACCCCTGTTCTCAACCAATAGAGTTAACAACATCAGTTGCCCAGCTGGTGGATTAACTCTTATGATTGTTCTCTAGAATCTCTTTACTATGGAAGATTGTTTGTGCTGAGAAAATTTGGGTCCCAACAACAAATTCAATTCCTGATCCGGCTTTTGTCCTTGCAGCTACTGAATGGGTAAAGGGCAAGCAAATGGAGGAAGTAGTGACTATAAAAAACACGTAAGCTATTCCCCTTCCTGGTTGTTTGCACTGCAATACTCTCAGTGGTTACATTAACATGCTATGCTTATATGGCCTTTTGGATGTCATTGAACTACTGTGGTTCGTTATTACCTTGTGGTAATTAAGTTTCTGGCTGGTATGTGCAATTTCCTTTTCAGACCATACTTTTTCATCAAAATTTTCAATACTAAATGTCGGTAAAGGGATTCCATCTGTGAGATTTTCTTTGTCATTCGTTGTCGTAATGATGACCGTCTTTCAGTTAATGCTCCAGCATTTGGACATGTCTGAAGCACTTTGGTAAAATTATTTGATATGCACTTGACTAACATGATGTTTCCAGAACTGTTTTGTATAGATCATATTGGTTTTTCTGTAGTTCCTTGGCAGTGGAGTGTGTCATGTGTTTGCATTGATTCATGAACTTATTTGTGTTTAATGGATGCATTTTCATTCAGAGACTTGATTTGCCTGTTTGCTAAGAGTTGTTTGGCTGCTCATATTTTCTTATGAATGTAGATGGTAATCCCATCAGGATAACCATGCAGCATACAGTTTAGCTTATGCCCTTTGCTTGCATGGAAGACTAATATACTTTCCCTTTATTTTTACTAATTTTGTATTTTGTCTATCAATAAGTTTGTGTGTGAGGATGCTGTCAAATGCTTTCAATCAAGTTCTGTAAGGCTGTAACAGGGTTTTGTGCTCTGCTTTGCAGTGAGATTGCCAAGCACTTGTCACTTCCACCAGTAAAGCTCCATTGTAGCATGCTTGCTGAGGATGCAATTAAAGCTGCCGTGAAAGACTATGAAGCAAAGAAGGCAAAGCTAGCACAAAAGGGTGAAGAGAAGGCTGCCGAAGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001079