BGIOSGA001194

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Revision as of 10:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001194| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001194, complete gene.| tag = B1040D0...")
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Gene Name

BGIOSGA001194

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001194, complete gene.

LocusTag

B1040D09.15-2

Ensembl Transcript ID

BGIOSGA001194-TA

Ensembl Protein ID

BGIOSGA001194-PA

Length

4970

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27698998..27703967

Sequence Coding Region

27703788..27703967,27703027..27703236,27702834..27702888,27701786..27701832,27700927..27700989
,27700772..27700829,27700579..27700675,27700330..27700387,27700166..27700255
,27700006..27700087,27699817..27699929,27698998..27699696

Genome Context

<gbrowseImage1> name=IndicaChromosome01:27698998..27703967 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:27698998..27703967 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCCGGGCAGCCGCAGTTCAGGTACACGCAGCCGCCGTCGAAGGTGATCCACCTGAGGAACCTGCCGTGGGACTGCACGGAGGAGGAGCTGGTCGAGCTCGGGAGCCCCTTCGGCAAGGTCGTCAACACGAAATGCAACGTCGGCGCCAACCGGAACCAGGCCTTCGTCGAATTCGCTGACCAAAATCAGGCAATTGCTATGATATCATATTTTGCATCATCAGCTGAGCCTGCACAGGTAAGAGGGAAAAATGTGTACCTTCAGTACTCCAATAGACAAGAGATTGTCAACAGCAAGAGTTCAGGGGAAGCTGCAGGCAATGTTTTGCTAGTGTCGATGGAAGGTGTTCTGCCAGATGCTGTGAGCATCGATGTTCTACACCTGGCCATTGTCACGGAGTTTCATGGCATCCTGGCAGGCTACTGCATCCGGAACACATGCTATCAGACATGTGGCAGGGTAAATGGGGAATGGAAGGTCGCGTGGGTATTTTCTGCTTTTGGCTTTGTTCAAAAGATTGCCACCTTTGAGAAGGCATCTGGTTATCAGGCATTGATACAGTTCTGTGATACTGAAACTGCATCATCTGCCAAAGCTGCTCTGGATGTTATTGGTTTCCAGAAATTTGATGTGCCTTGCCTTTTGAGAATAAATTATTCAGCACATACTGTTCTAAATGTCAAGTTTCAAAGTCACAGGAGTAGAGACTACACTAATCCGTACCTTCCGGTTGCTCCTTCTGCTATAGATGGATCTGGACCGGATGGGAAGAAGCAGGAAGCAGAGAGCAACGTTCTGCTTGCATCTGTTGAGAACATGCAGTATGTTGTTACAATAGATGTGCTTCACGAGGTCTTTTCTGCTTTTGGTTTTGTGCAAAAGATTGCTATCTTTGAGAAGAACTCTGGCTTCCAGGCATTAATCCAGTATCCAGATATTCAAACCGCAGTTGCAGCAAAAGAAGCATTAGAAGGGCACAGCATCTATGAAGGTGGATATTGCAAGCTTCATCTCACATTTTCGCGCCATACCGATCTTAATGTTAAGGTTAACAATGAGCGTGGTAGAGATTACACTGGAGGGAACACTGCACCGACCAGCAATCAACCTTCCATTCTTGGTCCTCAACCAGTATATTCCGGTGCTTACAACAACGCTCCTTCGTCAGCGACTGGTGCAGTAGTGCCACCAGGGACTACTCTCACTCCACCTGGAGCACCATCTCATCCTTACACATCCAGCGAGCCGCTTCCGCAAACTCCTGCCGTTCCCTCTGGTGGAGCTCCGCTGTACACTAGCCAGGGAATTCTTCAAGGCCCCCCTGGTGTTCCTCCTGCACAATTTCCAGGCTATGGATCTCCACAGTTTCCCCCAGGCTCAGCTCAAGCTCAAATGCATCAACAACATCCAGTCCAGGGAAGCCAGCAGATGCCTGGCCAAATGAACCATCAACCACCTCCAGGATCGTTCATGCAGTACCCTGGCGACGGAGGCCGTCCAGTTCAAGACGCACCTGGGCAACAAGCAATGCCGTTCCATGGCCATGGAGGAGGGCAGCATCTACCTCCAGGCTATGGAGGCCAGCCGCAGTTTCAGCAAGGTCCAAGGCCACCTATGCCGCCGCAGCAGTTTCCGATGTACGGCGACCAGCAGTTTCCTCCTGGTACGGGGCCCCAGATGATGATGCCCTTTGCTGGGCAGGGAGGAGGCCAGCAGCAGCCGTTTCGCCCTTATAACAGCCATTAG</cdnaseq>

Protein Sequence

<aaseq>MASGQPQFRYTQPPSKVIHLRNLPWDCTEEELVELGSPFGKVVNTKCNVGANRNQAFVEFADQNQAIAMISYFASSAEPAQVRGKNVYLQYSNRQEIVNSKSSGEAAGNVLLVSMEGVLPDAVSIDVLHLAIVTEFHGILAGYCIRNTCYQTCGRVNGEWKVAWVFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDVIGFQKFDVPCLLRINYSAHTVLNVKFQSHRSRDYTNPYLPVAPSAIDGSGPDGKKQEAESNVLLASVENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEALEGHSIYEGGYCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPVYSGAYNNAPSSATGAVVPPGTTLTPPGAPSHPYTSSEPLPQTPAVPSGGAPLYTSQGILQGPPGVPPAQFPGYGSPQFPPGSAQAQMHQQHPVQGSQQMPGQMNHQPPPGSFMQYPGDGGRPVQDAPGQQAMPFHGHGGGQHLPPGYGGQPQFQQGPRPPMPPQQFPMYGDQQFPPGTGPQMMMPFAGQGGGQQQPFRPYNSH</aaseq>

Gene Sequence

<dnaseqindica>1..180#732..941#1080..1134#2136..2182#2979..3041#3139..3196#3293..3389#3581..3638#3713..3802#3881..3962#4039..4151#4272..4970#ATGGCTTCCGGGCAGCCGCAGTTCAGGTACACGCAGCCGCCGTCGAAGGTGATCCACCTGAGGAACCTGCCGTGGGACTGCACGGAGGAGGAGCTGGTCGAGCTCGGGAGCCCCTTCGGCAAGGTCGTCAACACGAAATGCAACGTCGGCGCCAACCGGAACCAGGCCTTCGTCGAATTCGTGAGTATCCGTCTCCTTTCTGTATTATGTGGATTGCAAAAACGATTTGTCACATGTATAAAATTATTAATCGGTGGTTTTGGAGTTAGGCTTTTTTAGCTTACGTGTCGTCGGGTCTAGAGTGTGGAGCTATGAACACGTGACTTTTAGCTAATAATTTGTTTAGGAAGGGATGCTATTTTGGCTGGTTTATGCCCATTTAAATCAGCTGAGTGGCTGTGGTTCAAACTACTCTAGGCTCGAGTCTATTCATGGATTTTGTGGATGTATGTATGGTATGATGTGGTTTCTGCGTCCGGATGTTGAGGATTTGAATATGTTTTCATCTGAAGTTAGTCATACTTTCTGTTTCTTCAAGATTCTTGCACGATAATTTTAAACCAGTGGAGAAATTTACAAGTTATTAGCTCATATTTAATGTGTCTTGAAACCATATATGGTTATTTGGAGGTTTAGTGAGGAGATCATTGGATGGAAGTTGTGGGAAAGAATTTGTCTTGAAAAAAAGTACTAATTGCTGAACACTTCTTTTACTTCTTGCTCTGTTGCAGGCTGACCAAAATCAGGCAATTGCTATGATATCATATTTTGCATCATCAGCTGAGCCTGCACAGGTAAGAGGGAAAAATGTGTACCTTCAGTACTCCAATAGACAAGAGATTGTCAACAGCAAGAGTTCAGGGGAAGCTGCAGGCAATGTTTTGCTAGTGTCGATGGAAGGTGTTCTGCCAGATGCTGTGAGCATCGATGTTCTACACCTGGTAAGGAAAATAAGAATTACAGTGGGGTTTATTCTTTTAATTTTGTTCAGTTCATGTTTGTATGCAGGAATATATTTATTTACCAGGACTGTGTTAGTAACTTGTAGTCCATTTTTTCGCATCTGAATGGATTAGCAGGCCATTGTCACGGAGTTTCATGGCATCCTGGCAGGCTACTGCATCCGGAACACATGTGTGTGTTTGTTTCCTCTCCCTTACTCATCGCCTGCCCTATCCCTTCCCTTTCTTCCCTCCCTCCCTCCCTCTCTCCCTTCACCCCAACTATCCCTCCCTCACTCGTGTCCGTTATCCATGGCATCATGGTTGGTTAAGTAATAACTAGTGGCATAAAAAGTGGTTTTTCTCTTGTGCTCAAAGGAGAGTACTTGAGCCCTAAGTGCTGCAATTATCAGACTAAAATTTCATTGCTGGATTACTGGAGTTATGTCTGCGTTAACCATTTGAGATACAATATATTGACATGATGCATCCAAGGTAGTTAGGACACCATGCTTACTGAAATAAGGAAAAAATATGTCCTGTTTATTTAGTATGAGCATCTCAGGAAAGCCATCTGGAACAAACACAAAGAAGGAAAGCCATCTGGAACAAACACAAAGATATGGGCTTGTGTTTTCCTGTTGAATGACTGCCAACAATTAACTTCATGTGTTCTCCTTTTATTTTGTTGAGTTACCAAAGGCACAAGGTGCTAGATGGGCAGCACATCAGTGCGTCAATACCTAATCACTGAATAGGCTTCCCTTGGTGGGGATAAATTTACAAGCTGGGCAGAGGGTAGAGGGTGCCACCTATTGCATAGGCGGAAGCCTCAAAAGACTGGATTTAAATATGGCAATAGCCATATGACAATAAAGACGTCAAACTCATACTGGTATCATACTTTTCATAAGAAAACTCAAAATATGACCTGTTTTATTTTATACCACCAAAATTTTCAAGTTCACTTTGATACCTTCCCAGTAGTCTTTTATTTACCCGATTTAGCACCACCAAGTTATTCTGTTTCCTTTTAGCAATTTTATGTTTTTTGTGGTTGAGAAATAGAGTTGTGAATACCTAAAAACTAGCCCTTTCTTCCTTCTTCTCTTCCTTTCCATTCATGTCCTACTCAACCAGCAGCACCTCAATGCCTTTGTTCTGCGCTTCTGGCTGTCTCCGATGATGTTACAGGCTATCAGACATGTGGCAGGGTAAATGGGGAATGGAAGGTCGCGTGGGTGGGTGGTAACTAAACGAACTGTAATTTTTATGTGGTATAAGACTAAACAGGTCGCATTTCGGTGCTATAAAACCAACTTTTCCTCACTTTTTATGGGACAGATCAATAACAGTAAAATAAGCATAACTGAAGTCCGATTATAGAAAAACACAGGTGATAAAATAAGTCAAACAGTTAATCTCTCATATTGTGATCATACTTTTTACGGAACTGTTGTTCAATAAGGACGAAATAAACATCACTGGAGTCCATTAACTGTTNGTTTTCTTATGTTGCTTTAGTTCCACACCCATAAACTTCCTTTGCCACGTTGGGTGTAAATGTCGGCTTGTTTGTATGCTTCTTTGCTATCTTTATGCTCTGTAGTGTTGAGGATTGCCACACCTATATTATATTCTGTTATAATGAGCTTCTGGGGTTCAACATATGGATGATCTGTGTGATAGAATGTCAACATTTTTACTCTATTACTGCTGCATAGATATACCTAAAGATGTGACTCCTTCCTTTCATAGGTCATCTAGCAAATACTAGAAAATGCTTAGTGTTGACTCTGTAGCCTGTAACATGATAAACTTCTTCTTTTTTACTGACATAGTAAAAGCTTATATTGCTACAATTTGTATTTATGCCTGGAGACATGATAAGTTCATTTCCACTGTCTAGTAATTTTAGAAGGCCTCTATTTGATTCAATGATTTCTGCACTCAGATGTAGTTAACCTTCATTTGTTCACGATCCATTTTTTCTTATCAATTTGCTTGTCATATTCACAACAGAATTCGTGTGTGCAGGTATTTTCTGCTTTTGGCTTTGTTCAAAAGATTGCCACCTTTGAGAAGGCATCTGGTTATCAGGTAATGGTTTTACTTTTACTAGAGTATTTTGGTAACATGTCTTATCTGGTCGCTGTCCTGGTTGATTTTATCTGAGTTATGTTTCCCTGGCTTGTAGGCATTGATACAGTTCTGTGATACTGAAACTGCATCATCTGCCAAAGCTGCTCTGGATGGTAGATGCATTCCTAGGTATTTTGCAAGACACTCGTATTTCTGGGTGTAACTCTTTTTTACACGTTAATGGTTATTTTATTTTGTTTACCTTGCAGTTATTGGTTTCCAGAAATTTGATGTGCCTTGCCTTTTGAGAATAAATTATTCAGCACATACTGTTCTAAATGTCAAGTTTCAAAGTCACAGGAGTAGGTAAAAACTGCCCTCTTGTTAATCTGTATTACTTTGTTTGTTATGCTGTTTTATGGACGATTTATATGTTCTACATGTCTATTTATTCCTTTTTGAACATGGGCAAAAATATGAAACTCAAGTTTCGCCATTTCACCATTTGTGCCCTTAAGAAAGATTTCCCACTTATATTTGGCTACTCTTTCTTTCAGAGACTACACTAATCCGTACCTTCCGGTTGCTCCTTCTGCTATAGATGGATCTGGACCGGTAACACCTCTAGCCTTTCCGCGTTTTGTTTATATTTTTGTTCTTATGGCTAATTTTATTTTGGTTTTGTGCAGGATGGGAAGAAGCAGGAAGCAGAGAGCAACGTTCTGCTTGCATCTGTTGAGAACATGCAGTATGTTGTTACAATAGATGTGCTTCACGAGGTAATGTGTTTCACACTGATGTTATAGATCATCTTGTGCACATAGCTTGGACTTATCTTTTGACTCCTGTAATTGCAGGTCTTTTCTGCTTTTGGTTTTGTGCAAAAGATTGCTATCTTTGAGAAGAACTCTGGCTTCCAGGCATTAATCCAGTATCCAGGTAAGTTGCAGCTACACTGAAGTCAAACTTTTGCTGCCTGAGTTGTCCCTCAAAGCCTTTTATGCTTCTCTTGTAGATATTCAAACCGCAGTTGCAGCAAAAGAAGCATTAGAAGGGCACAGCATCTATGAAGGTGGATATTGCAAGCTTCATCTCACATTTTCGCGCCATACCGATCTTAATGTTAAGGTAATTGCTATAGTCAGTGTGTAAGCATACTAAACATTACAGCATTCAGAAATTTCAGAATTTACAAATAATACATGCTCCGTTTGTGGTGGATGACATGATCAAGTGATCTGCTTTCAGGTTAACAATGAGCGTGGTAGAGATTACACTGGAGGGAACACTGCACCGACCAGCAATCAACCTTCCATTCTTGGTCCTCAACCAGTATATTCCGGTGCTTACAACAACGCTCCTTCGTCAGCGACTGGTGCAGTAGTGCCACCAGGGACTACTCTCACTCCACCTGGAGCACCATCTCATCCTTACACATCCAGCGAGCCGCTTCCGCAAACTCCTGCCGTTCCCTCTGGTGGAGCTCCGCTGTACACTAGCCAGGGAATTCTTCAAGGCCCCCCTGGTGTTCCTCCTGCACAATTTCCAGGCTATGGATCTCCACAGTTTCCCCCAGGCTCAGCTCAAGCTCAAATGCATCAACAACATCCAGTCCAGGGAAGCCAGCAGATGCCTGGCCAAATGAACCATCAACCACCTCCAGGATCGTTCATGCAGTACCCTGGCGACGGAGGCCGTCCAGTTCAAGACGCACCTGGGCAACAAGCAATGCCGTTCCATGGCCATGGAGGAGGGCAGCATCTACCTCCAGGCTATGGAGGCCAGCCGCAGTTTCAGCAAGGTCCAAGGCCACCTATGCCGCCGCAGCAGTTTCCGATGTACGGCGACCAGCAGTTTCCTCCTGGTACGGGGCCCCAGATGATGATGCCCTTTGCTGGGCAGGGAGGAGGCCAGCAGCAGCCGTTTCGCCCTTATAACAGCCATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001194

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA001194&oldid=38918"