Os11g0272900

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Revision as of 09:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0272900| Description = The stop codon is not identified.| Version = NM_001189549.1 GI:297728228 GeneID:9266270| Length = 4569 bp| Definiti...")
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Gene Name

Os11g0272900

Description

The stop codon is not identified.

Version

NM_001189549.1 GI:297728228 GeneID:9266270

Length

4569 bp

Definition

Oryza sativa Japonica Group Os11g0272900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:9679435..9684003

Sequence Coding Region

9679435..9679457,9679746..9680010,9680248..9680355

Expression

GEO Profiles:Os11g0272900

Genome Context

<gbrowseImage1> name=NC_008404:9679435..9684003 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:9679435..9684003 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtaagacaattcgaaagaacccgtggtcgcaacacgctttccaagttactgctgatgtggagtctgggctgtatgaatgcgagtgcaaaacgtggatacacacagtgtgagcccgtgttgagcacaagatatgcgttcgaggaacaactgagcaaattgtacacaagggcggtcttcaccttattcaaggaaacactgttcgatagcacggcgtttcttgtgaatgaggtttccaacgccatgggagcctacgtggtgacccatggtaagacaattcgaaagaacccgtggtcgcaacacgctttccaagttactgctgatgtggagtctgggctgtatgaatgcgagtgcaaaacgtggatacacacaggtcttttctgcccacatattgtg</cdnaseq>

Protein Sequence

<aaseq>MVRQFERTRGRNTLSKLLLMWSLGCMNASAKRGYTQCEPVLSTR YAFEEQLSKLYTRAVFTLFKETLFDSTAFLVNEVSNAMGAYVVTHGKTIRKNPWSQHA FQVTADVESGLYECECKTWIHTGLFCPHIV</aaseq>

Gene Sequence

<dnaseqindica>4547..4569#3994..4258#3649..3756#accggcccaccaaaaaaaatagcgaaaagatagagagaaacaaaaagaaatacgaaaaaagaaaaaaaaaagagagaaaaaactcctgcatctgccgccgagaggagggagtcacgcgccaacctcgggcgccgccgcgcggaggctccctccggcctcgttccccatccctctcctccctccgtccccctccctctcctctctcccagcttccctccctccctctccttccctaccagcctccctcctttcctccatctctcccaataactctcataccttccagtgcgccgggccgtcgtggggaaccccggcgaagcatccctctcagctcgtcctttcggcgccgcccacgaatcccttccttttccttgaggtgagctttgccctaaaaaaatcttgttgttactgtctatagatcactatgttactgtctggtttactgcatgcaagttttgtcatatagaattatttggttacagcgtttttactatttatagatcgcgatgttactgtttggtttactgcatgcgagctttatgcagaaaaatctgtggttactgtgttgttactgtctatagacctccctgttactgtccggtttactgcatgtgagttttgtcttaaaagaaagcttttgttactgcttttctactgttttgttactgtatttcctgtattattttactgtctgatttactacatgtgagcttgttcgaaagagcttgaagccgtcggaatcaccattttgttactgtatttcaactgttctgttactgcatttctttaattattttactgtctgttttcctgcatgttactgctgactggtctatctgttactgttatggcaagtatttttttactgctcattgctgtacgtattgcgtatgaaaattactgccgctatctaagatattgcatgtcgatatgataggcgggtgcaaaagaagatggcatcaacatctacttattcgggtgtgcacctcagaggtgacataccgcccccttcgccgccagcaattgatgatgtgcttgatgtcttaccaatagcagtgagccccccaccaccatcactgcatcaaactttcatagatcccttactgcacagaacagttatcaccccacctccccctatcaatccagaggcatgcatcacccctgacagtaaccttacattcacacatgtgagtatgttactgcatattttgtgttgtgttactactctgccatgagtattgtcctacgcataacaaataatgaattttatgtacttttttccttcaattatagggccaagatattcctgaagatgttgtccctttgattggcacgatgtttgaatcagaagatgctgcttacagcttttacaatagatatgcacggtatgcaggttttgggattaagaaaggcaagtttgacaatgcccgtcgtgcacgctttctgcattgcacgcgccaaggcaatcacacttacaaaggcgaggaggtaaatagggtaagaaactagacaacaaaacgagttgggtgcaaagcattgataagggtgaagcaagatggtgacatttgggaaatcacaagagcacaactggatcacacccatcatctgtatgtctccccatcaatggcggttttccaacagtcccacaaaaattatgatccatcaatcatgcaatttgttagacaacttcaggaatgccacgtatctcacggtgcaataatgtccttactatcaaaaatgcatggtggcccccagaacattcctttcactaacaaggaccttgcgaataggtatttgggccttctgtcttatttgataaatctgcactattcgactattttcattgctgctgtattttactacccaaatgcatgttactgctgctatacttgtttgtttttagcattgttgatgtgcattacttccacggggtagcaatgttgttactggattttagttaacatgttactgctaatacatagttgcttccttttactgctgtgttgtgagttactggttagtatacatcttgttactggattttagtttacatgtaactgctaaaacatggttgcttccttttactgccgtgttgtgagttactggttagtatacatcatgttactgaattttagttagcgtgttactgcaagaaggctgagaacaaggtggaggagaactcagatgatgtaaacaagctgctaatgtttttcaaagaaatgaaagtcaagaacaacaacttctattttgatatccaagctgatgagaaagatgctatccagaacatattttggtgcaatgcaagtagtagggcagcctaccaccattttggtgattgcatcacatttgacacaacataccgaacgaacatgtttaacatgccattggcggtgttcgttggatgcaatcaccacatgcaaagtgtgattctgagtgttgctctccttagggatgaaagagctgaatcatttgagtggttgtttaaaacttttctgaagtgcatggggggcaaagctcccatgtgtattctcacaggtgcgttgaactataaaaatatctcagatgcctaccttgcttacattttgttacctcttttttgtttatatgttactgcctaattaacacttggctactgttctaccaatataaatgcagacgaggacccagctatggcatcagctataagggaggtgctaaagaacaccattcataggctctgccgatggcatgtactaaagaagtacaaaaaacagttaggtgtgctctatgaaatgttcaagcatagaaatttcaaagagaagctgcactttgtgatcaaccatccgctgacaccaagtgaatttgtggctgcatggaaagatcttgttgaagagtttgaacttcaaggttgtgaggtgatggaaaacctttataacttgcgtgccgaatggattcctgcttacttcaaacagatctactacgcaagaatgacatccactcaacggagcgagagtgtgaaccatatggttaaaacaggctatctcaaagagctcactgcactccacagagttgcagctgagatgaatagatgcatccagatgaggaaacaaaaggaggactgagaaactaatgctcaagaggtactcactgtatttcctttattattttactatctgattgactgcatgtgagcttgtttgagagtgcatttgccgtaggaatcaccattttgttattgcatttcaactattctgttactgcattaccttcattattttactgcctggtatactgcatgttactgctatctggtctatctgttactgttactgttattaccagaattgtctccactgcaataaactagcatttcaactattctgttactgcatttccatcattattttaccgcctgttatactgcatgttactgttgtgtggtctatctgttactgttactgccagaattgtctcttcactgcaataaactatgcttgttactgcaactgcagtgtgagcccgtgttgagcacaagatatgcgttcgaggaacaactgagcaaattgtacacaagggcggtcttcaccttattcaaggaaacactgttcgatagcacggcgtttcttgtcaatgaggtttccaacgccatgggagcctacgtggtgacccatggtaagacaattcgaaagaacccgtggtcgcaacacgctttccaagttactgctgatgtggagtctgggctgtatgaatgcgagtgcaaaacgtggatacacacaggtgtgttgctaggtctagatttgttacttcaaatgtttagtcctgttactgttgctatactctctgttactgctgctatactctctgttactattgttatactcactgttactgcatttccatcaatattttaccgcctgttgtactgcatgttactgttgtgtggtctatttgttactgttactgccagaattgtctcttcactgcaataaacaatgcttgttactgcaactgcagtgtgagcccgtgttgagcacaagatatgcgttcgaggaacaactgagcaaattgtacacaagggcggtcttcaccttattcaaggaaacactgttcgatagcacggcgtttcttgtgaatgaggtttccaacgccatgggagcctacgtggtgacccatggtaagacaattcgaaagaacccgtggtcgcaacacgctttccaagttactgctgatgtggagtctgggctgtatgaatgcgagtgcaaaacgtggatacacacaggtgtgttgctaggtctcgatttgttacttcaaatgtttagtcctgttactgttgctatactctctgttactgctgctatactctctgttactattgttatactcactgttactgctattatactctgttactgcaacttccactctcagttactgcaaattgcactctctgttactgctgttatactctgttacttctattatattccctgttactgcaacttccactctctgttactgcaacttccactctctgttactgcaacttctatgtaccatattgctgcaggtcttttctgcccacatattgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0272900, RefSeq:Os11g0272900