BGIOSGA001225

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Revision as of 10:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001225| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001225, complete gene.| tag = P0410E0...")
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Gene Name

BGIOSGA001225

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001225, complete gene.

LocusTag

P0410E03.25-1

Ensembl Transcript ID

BGIOSGA001225-TA

Ensembl Protein ID

BGIOSGA001225-PA

Length

6547

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27156633..27163179

Sequence Coding Region

27163120..27163179,27162502..27163009,27161398..27161561,27160981..27161046,27160545..27160597
,27160312..27160393,27160164..27160198,27159866..27159956,27159343..27159435
,27159183..27159215,27159017..27159105,27157705..27158917,27156977..27157062
,27156800..27156884,27156633..27156686

Genome Context

<gbrowseImage1> name=IndicaChromosome01:27156633..27163179 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:27156633..27163179 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCCTTGCCTCCCGCGCCTCTCTACGCCGCGCCGCCGCCATGTCCGCTTACTACAACGCCCGAGGATCCGCTCGCCCGCGACGAGGCTACTACTCCGGGCGACCCACGCCGCCTCCCCACCACCACCACGACGCCGGCGCCGAGCTCGTCAGCGGCGACTCCCACCACAGCGCGGTGCGTGCCGCCAACGATTCGCTCCGCTGCGGCGGCGGCCGCGGGCCTCCTCCGTCGCCGTACGGATACGCGCCGCCTCAGCCGCCGCCGGCGCTATACGGGGCCGTGCCGTACAACTACGGCCACCCGCAGCAGCCGGGCCCGCCCTACGGGGCCGTGCCGTACAACTACGGGCCCCCGCCGCCGCAGCCACAGGATCCTCAGTACGGATACGCGACCCCGAATCCGTATGTCCAGGGGCATCCGCAGCCGTACTGGCGTGGGCCAACAAATGCAGGGTTCCGGCCGCCGTACGCCGGCTTCAGGCCTGGTGCGCCGCAGCAATCACCAAGGCTAGCGGAGTACCGCCGACGGTGGCGATTCACGCAGCATCGGCCACCACGCCAAGCCGAGAGGTTTAAGGTTCTATCATACAATATACTAGCTGATTATCTGGCCCAGGAGCACCAGTTTCTTTATGAGCGCATACCATCTTTCATCATGGATTGGAACTGGCGGAAGGAAAAGTTAGTGTTCGAGTTTGGTTTGTGGTCTCCAGATATTTTATGTCTTCAGGAGGTTGACAAATTTACAGACCTTGAGCAAGAAATGGCAACTCGAGGATATAATGGCATATGGAAGATGCGGACTGGAAATGCCACTGATGGATGTGCGATCTTTTGGCGAACAGCTAGGTTTCAGTTGCGCTATCAAGAGGATATCGAGTTCAATAAGATTGATCTCCGTGATAATGTTGCACAGATTTGTGTTTTAGAGTCGGTGATTCCAGGAAATGTGCAAACTGAGTCTAGCCCTAACCATCCTCAACAAGCTAAGCAAATTGTTGTATGCAATACTCATGTTCTTTACAATCCAAAGAGAGGGGACATCAAACTTGGTCAGGTAAGGACGCTTCTTGATCGAGTGTATGCTCTATCAAAGACATGGAATGATGCTCCAGTAATAATTTGTGGAGATTTCAACTCTACACCCAAGAGCCCTCTGTACAATTTTATGCTGGAGCAAAAGTTGAATCTATCCGGTCTTGTGAAGAGTAATATATCAGGGCAGCAAACTAGTACTGCACAGGGACTATATACTGGTCCTAACACAGCTCGATTCTATCCGCCTTTTCACACGACGAATAGTAAGGAGGGTAGCATAAGTTATCCAAATGATCATAAGCCTCAACCTGAAGCAAGAAATGTAACGGAAAATTCTCGTCTTTCTGGCAGAGAACCAACTTTGACTGATACTGCTTCAGACTCTTTCTTAAACCCAGAGAGCTCTACAAATCCTCACGAGCAAGAATTAATGGGCTGTGTGAAAGGTCCTACAAAGGAAGCCTATACATCTGATGCTGAAGCACATACCAACACCACTAATGGTGAAGAAACTTCAGTGGTTAACAACTCCAGTGAAGGATATGGAGTAATAAAAAAGAGCTCTGTAGAAGAAACTAACGTTACAAACTTTTCGTCTGCTTCAACGACAGTAAATGATGAGACCCTTCAGTCAGATTCGAGTGAAATAGTTGATAGAAGTCAGCTTCTTCCATCTTATGAATCATCTGAATCTAAAGATTCTTGGGAAGAATTAGCTGGTGGTAGCAATAACAGTTCAAATACCCTGGCAAACTTTCCTGGTCATGTGATTTCTGGAAAAGCTACTTGTGATTTTAAGCGAAACAATGTCCAGTCAGATACACTGTTTGATATATCAAAGGTCAGACCCGATGAAAAGGAACAAGACAGTGAACCTTTGTCTACTCAAAATAATTGCATGCGTAGTGAATCAAAATCAAATTGTTTCAGTGATCCCCTGAAGTTTGCTGATACACTTCATCAAATGAGTAATCTGAGGCTAGAAGAAGAAAACAATACTGAGCCAACTCAGTTAACATCACCACTAGAGCCTTTGCAACACACAGATTGTGCCTTTTCCGACACTTGTGATGTTCAATGTACACCTGAAGTGATAAACAGGCTTTCAAAATCGCATTCATGTTCAAATGAGCTTGGAAATTGTTCTTGTGCTTTTGAGAATGATGGGGCATCCAATGAAGTTTTGTGCTCAGATGTGAATGCAGATCCTTCCATCTTTAAAGAGTTTTCTGGTGTTAATGAATTTTTACTTGAAGATGAAGACCAGCTGCAAACAACCTCAGATGGTTCACCATCTGCCCAGCAAGTGATTACTTCTGATAAAAGATATTACGATTATGATCCATACAGGTGGACACCAGATGAAATTAAAGCTGCTACTGGGAATGAAGATTGCACCTTCGTGGAACATAATTTGAAAGTCCGAAGTGTCTACACAGATGTGGAGGATTTTGAAGGGACAAAAGATGCCAACAAGGAGCCTCTAGTAACAAGTTACAACAGAAAATTTATGGGAACAGTGGACTACATATGGGCTTCCGAAGATCTGCAGACTGTTCAAGTGCTAGATACCTTCCCAAAAGAAATTCTGAAACAAACAATTGGGTTCCCTACCAAGAAATGGGGAAGTGATCATATCGCTTTGGTTTGTGAATTAGCATTCACAAAATAA</cdnaseq>

Protein Sequence

<aaseq>MRLASRASLRRAAAMSAYYNARGSARPRRGYYSGRPTPPPHHHHDAGAELVSGDSHHSAVRAANDSLRCGGGRGPPPSPYGYAPPQPPPALYGAVPYNYGHPQQPGPPYGAVPYNYGPPPPQPQDPQYGYATPNPYVQGHPQPYWRGPTNAGFRPPYAGFRPGAPQQSPRLAEYRRRWRFTQHRPPRQAERFKVLSYNILADYLAQEHQFLYERIPSFIMDWNWRKEKLVFEFGLWSPDILCLQEVDKFTDLEQEMATRGYNGIWKMRTGNATDGCAIFWRTARFQLRYQEDIEFNKIDLRDNVAQICVLESVIPGNVQTESSPNHPQQAKQIVVCNTHVLYNPKRGDIKLGQVRTLLDRVYALSKTWNDAPVIICGDFNSTPKSPLYNFMLEQKLNLSGLVKSNISGQQTSTAQGLYTGPNTARFYPPFHTTNSKEGSISYPNDHKPQPEARNVTENSRLSGREPTLTDTASDSFLNPESSTNPHEQELMGCVKGPTKEAYTSDAEAHTNTTNGEETSVVNNSSEGYGVIKKSSVEETNVTNFSSASTTVNDETLQSDSSEIVDRSQLLPSYESSESKDSWEELAGGSNNSSNTLANFPGHVISGKATCDFKRNNVQSDTLFDISKVRPDEKEQDSEPLSTQNNCMRSESKSNCFSDPLKFADTLHQMSNLRLEEENNTEPTQLTSPLEPLQHTDCAFSDTCDVQCTPEVINRLSKSHSCSNELGNCSCAFENDGASNEVLCSDVNADPSIFKEFSGVNEFLLEDEDQLQTTSDGSPSAQQVITSDKRYYDYDPYRWTPDEIKAATGNEDCTFVEHNLKVRSVYTDVEDFEGTKDANKEPLVTSYNRKFMGTVDYIWASEDLQTVQVLDTFPKEILKQTIGFPTKKWGSDHIALVCELAFTK</aaseq>

Gene Sequence

<dnaseqindica>1..60#171..678#1619..1782#2134..2199#2583..2635#2787..2868#2982..3016#3224..3314#3745..3837#3965..3997#4075..4163#4263..5475#6118..6203#6296..6380#6494..6547#ATGCGCCTTGCCTCCCGCGCCTCTCTACGCCGCGCCGCCGCCATGTCCGCTTACTACAACGTACGCCCGCCCGCCCATCTCCCCTCGTGGATTGCTCCCCCGAATCCCCCATCCTTCCTCGCCTCTAGAGTCTAAACCCTCCCCATCTCCTCAATCTCTCTCTCTTGCAGGCCCGAGGATCCGCTCGCCCGCGACGAGGCTACTACTCCGGGCGACCCACGCCGCCTCCCCACCACCACCACGACGCCGGCGCCGAGCTCGTCAGCGGCGACTCCCACCACAGCGCGGTGCGTGCCGCCAACGATTCGCTCCGCTGCGGCGGCGGCCGCGGGCCTCCTCCGTCGCCGTACGGATACGCGCCGCCTCAGCCGCCGCCGGCGCTATACGGGGCCGTGCCGTACAACTACGGCCACCCGCAGCAGCCGGGCCCGCCCTACGGGGCCGTGCCGTACAACTACGGGCCCCCGCCGCCGCAGCCACAGGATCCTCAGTACGGATACGCGACCCCGAATCCGTATGTCCAGGGGCATCCGCAGCCGTACTGGCGTGGGCCAACAAATGCAGGGTTCCGGCCGCCGTACGCCGGCTTCAGGCCTGGTGCGCCGCAGCAATCACCAAGGCTAGCGGAGTACCGCCGACGGTGGCGATTCACGCAGCATCGGCCACCACGCCAAGCCGGTAACATCTTCCAGAGTCTGTGATATATTCTGTCTCAATGCTTAGCACTGCAGTAGTAGTAGAATCGCATAGCAAACCATCCAGGGAGCACTTCTCTGAAGTAAAAAATAGTGTAATTGCTTTTTACTTTTTGTGTGGAAAAACTTTTAGGTTATTAATGATCGGAGTTTCTTAATATTTGATGGCTTAGCACTTCTCTGAAGTCAAAATGGTGAAAGCTTTTCAATTTGGTTTGTGTACTAAACTAGTAATGGATTATAGTTTCACTTGATTTTAGACAACAGATGTGCCATGTGGTATGTGATATATGATATATGAAGGAAAATGATTTAGTTTATGCCCCTCAACTCCTCCAAAAGTTTACGTGTTCACACCTCAATTCTCAAGGTGGATGAAAACCACCACTGAACCTTCTATACCAGATAAATTACACCCCTAACCGATCAAGCCTGAAACAGACTTCAGCGCCACATCCACTGCCATGCTAGCACTGATGCCACAGCAAGGCATTGGAAAAGTGATACAGTTTCTCTTTCCCTCCTATTACCTTTCCCCTCTCTCCTCAGCTAAATCAATATCACAGCTAACTATCTTGTTCTGTGACAGGATAATGGGCAAAGAGAATGGGAGAGGGAAACAGAAAAGGGTCCATGGGCATCTTATCCATGAGCAAACACCTTATTTCAAGCTTATGATTGTAATCTATTCAGTTTTACAGTTGAGGGGTGAAAACTAAACTTTCAGAAGTGTCGAAGATGTAAAAGTAGACACTTTCTGTATATGAATAATTCAGTCAGATAATTACCCATGGACATGGTGTGTTTTAGACCAAGAGTATTAAAGTCGAGTAATCATTATGTGTGTGGAATTGATGTTCTTGTTTTAAAATTACCACGTGTTTTCCTTTGGTATATTGAGTAGATCTTTTTTTATCATGCAGAGAGGTTTAAGGTTCTATCATACAATATACTAGCTGATTATCTGGCCCAGGAGCACCAGTTTCTTTATGAGCGCATACCATCTTTCATCATGGATTGGAACTGGCGGAAGGAAAAGTTAGTGTTCGAGTTTGGTTTGTGGTCTCCAGATATTTTATGTCTTCAGGTAATTTATAACTGATGTACTGCAGTAATTCAGAAGGGTTGTGCTGCTAAGTCAATAGTTAAAAAAGTGGTAATACCTTCGTGGAGCTAGTTATGTTATCTCGAAAAGTTGAAATTTGGAAAATTGCAAGGAATTGCAAGGCCACTAGTCTACATGGTCACTCCCTGCTAGTTCAATAGCTGCATATAACATTGTCAACTAGAAATCATACAAAGGATAAAGTTTGTTAGTTTTTTGACACTTCTTGATGAATATAACCTGTATGCTATAAACACATTTCTTTGATATTAATGATTAAATGGGATCTATATTGACACACGTTAGACTTATATTCCTTGGTTATGCCTGTAGGAGGTTGACAAATTTACAGACCTTGAGCAAGAAATGGCAACTCGAGGATATAATGGCATATGGAAGGTAATATCCAATAGTTTTAAACCGATGTTCGAAAGCATTTTGAAGTATGAATTTATATCTATCGTTATAATTTATACACACTAAATTTACTGGTCATTTGACTAATTCTTGGTCAAAATCTACAATTTGTTTTTTTAAATGAAAATATTCCCTATAAAAATCGACAGAGTGGGTATATATCACAGGAATTACTCTGTTGATGAAGTGGACAAAATATAGTTGTGCAAAAATGGCCAGTGCTTCTAACTACTCATTTACAGTTACTTGATTACATAGCATGCGCAGAACTGAAACTTTCATTAGTGATTGCCATTGAGGAAACACAATTTTCTTGAATCTGCTTGACCGTATGATTTACGCATTATGCTGGACCTTTGGTACAGATGCGGACTGGAAATGCCACTGATGGATGTGCGATCTTTTGGCGAACAGCTAGGTGTGTCAATCCTGTCTTTCCCTTCTTCTTCTTTTTTTTTAAAGAAAGAAACCTTTTGTATGATACAAAATTATTTCTCCTGATGTTATACCTACATTAAAAAACTTCTACTTCGACTTCTCATAGTCATCCAAAATTTTTCATCTTGTAGGTTTCAGTTGCGCTATCAAGAGGATATCGAGTTCAATAAGATTGATCTCCGTGATAATGTTGCACAGATTTGTGTTTTAGAGGTGGGCTTGAAATCGTTGGGCAAACTACTGATCACTTTGAATTGAAGCTTTCTTTATGCTGCCAATCTTGCATGGCCTATATCTGCTAATCGTTTCCTCATTATATTTTTCAGTCGGTGATTCCAGGAAATGTGCAAACTGAGTCTAGGTAATTGAAACTTCAAGATTTCTAAACTATGCATCACAGTTGTGAGTTGTGACAATGGTGTTATGCTGTCTCCTTTTTATTAGTTGTTTCTGGCTTGTGTAGTTCCTATTCCACGTTCCTTTATTATTGAAGAGAAAATTTCATAACTCACATGTCCACATTGGTATTATCTATCCATGTTTTTATAACCATTCTTTCGTTTCACAGCCCTAACCATCCTCAACAAGCTAAGCAAATTGTTGTATGCAATACTCATGTTCTTTACAATCCAAAGAGAGGGGACATCAAACTTGGTCAGGTATTATGTTGTGGTCACTCGTGAGTCTTAATTTCCTACATTAGTTCAGACTTTTATAGTATGATTTTTTTTTCACCAGAATTAGCCTCTTGGCCTAAGCACTTTTGTTTTTAGTATAACATGGTAAAGAAATAACACCTTGTTAGACCTTAAGTACTGAGCAACAATGTACACCTTATCTTCCATCGTGTTGCTTTCTGATGCTTTCATGGCATCATTTGAGATCGTGCATTGTTTTCCACCCTCTCGTTGTAGATGACTAGGTGGGTTGTGGTCTTTTGCTATTATCTTGTTTTATACTTTTATCACTGAAACAAAGTATAGCTGCATTACCTAGTATTTCTATCATCTTTCTTGACCATTAATAGTCAGTACATTATGCACCTTCATACGTATTATTTGAATACTAATTTTCTTGTCATACTTACAGGTAAGGACGCTTCTTGATCGAGTGTATGCTCTATCAAAGACATGGAATGATGCTCCAGTAATAATTTGTGGAGATTTCAACTCTACACCCAAGGCAATATTCAGTACCTTACCATTTTATATTAAAGATTCATATCTGGTTCACTGTATTTCTTGGACATTTTATTACATGCTTACATGTAACAAGGTCAAAATGTCTGACCCATTTCTTCCTCATTCAGAGCCCTCTGTACAATTTTATGCTGGAGCAAAAGGTAAAGAGTGTTCTGTATTAACTTGAAAATGGCTGTTTTTGAGAAACTGAAACTCACACAACATAATAATCATGCAGTTGAATCTATCCGGTCTTGTGAAGAGTAATATATCAGGGCAGCAAACTAGTACTGCACAGGGACTATATACTGGTCCTAACACAGCTCGGTGAACCTTCTGCTTTATCAGAGACACCCTCTTTTGACAATTTTTTCTGCATATTTTAACCTAACTGACCTTTGCTTGATGCTTTTTGGTATTTAACAGATTCTATCCGCCTTTTCACACGACGAATAGTAAGGAGGGTAGCATAAGTTATCCAAATGATCATAAGCCTCAACCTGAAGCAAGAAATGTAACGGAAAATTCTCGTCTTTCTGGCAGAGAACCAACTTTGACTGATACTGCTTCAGACTCTTTCTTAAACCCAGAGAGCTCTACAAATCCTCACGAGCAAGAATTAATGGGCTGTGTGAAAGGTCCTACAAAGGAAGCCTATACATCTGATGCTGAAGCACATACCAACACCACTAATGGTGAAGAAACTTCAGTGGTTAACAACTCCAGTGAAGGATATGGAGTAATAAAAAAGAGCTCTGTAGAAGAAACTAACGTTACAAACTTTTCGTCTGCTTCAACGACAGTAAATGATGAGACCCTTCAGTCAGATTCGAGTGAAATAGTTGATAGAAGTCAGCTTCTTCCATCTTATGAATCATCTGAATCTAAAGATTCTTGGGAAGAATTAGCTGGTGGTAGCAATAACAGTTCAAATACCCTGGCAAACTTTCCTGGTCATGTGATTTCTGGAAAAGCTACTTGTGATTTTAAGCGAAACAATGTCCAGTCAGATACACTGTTTGATATATCAAAGGTCAGACCCGATGAAAAGGAACAAGACAGTGAACCTTTGTCTACTCAAAATAATTGCATGCGTAGTGAATCAAAATCAAATTGTTTCAGTGATCCCCTGAAGTTTGCTGATACACTTCATCAAATGAGTAATCTGAGGCTAGAAGAAGAAAACAATACTGAGCCAACTCAGTTAACATCACCACTAGAGCCTTTGCAACACACAGATTGTGCCTTTTCCGACACTTGTGATGTTCAATGTACACCTGAAGTGATAAACAGGCTTTCAAAATCGCATTCATGTTCAAATGAGCTTGGAAATTGTTCTTGTGCTTTTGAGAATGATGGGGCATCCAATGAAGTTTTGTGCTCAGATGTGAATGCAGATCCTTCCATCTTTAAAGAGTTTTCTGGTGTTAATGAATTTTTACTTGAAGATGAAGACCAGCTGCAAACAACCTCAGATGGTTCACCATCTGCCCAGCAAGTGATTACTTCTGATAAAAGATATTACGATTATGATCCATACAGGTGGACACCAGATGAAATTAAAGCTGCTACTGGGAATGAAGATTGCACCTTCGTGGAACATAATTTGAAAGTCCGAAGTGTCTACACAGATGTGGAGGTAACCGCTAACTTCACATGGCTAGCTACAATTTCTCCATCAATCTTTGATGTGAGAAATCAACATGTTTCACCACTCATCTTTATTTAGATATATCAGATATCAACTGTTAGCTCGTTCTGAGATGCCTAATTTTTGGCGGGTTGCAATATGTGTAGTTCTTAACTCTATAAACAAAATAAATTGCACTTCACACCATTTTTTTCTTTGTTCCACCTTGCAGTAGTTTCATTTAAGCAATGTTTTCACTTTGCACCACCCTAAGCTAACGAAGGTTGTAGTTTTTCAGTAGCCGAGTTCATTTCCAGTTAACTGTATAACCACTAACACAACACAATACTGGGCTGTAGCAGTCTAGCCTGGTGTTGGAAATCACCAAAGGTGCTTGATTCATAACGACGACAGACAATTGGATAAGACCAACATGAGATTTGGCTGGTGCAAACTGCAATACTGTTGGTGACTTTGGGTAGCGCAAAGTGAAAATATTGTTTGAAACACCAGTGTAGAGTGAAATAAAGGACAAATAGCTAGTGCAAAAGTGCAAATTTACTCTTTTTATATAGAATAATTTTCTAGAACCAATAAATTCCAGGCAATCATGTGAAACAATTGTGATTGTGGTAACTATTGTTCAACCAGGATTTTGAAGGGACAAAAGATGCCAACAAGGAGCCTCTAGTAACAAGTTACAACAGAAAATTTATGGGAACAGTGGACTACATATGGTAAATAAGCATTATTGGAATTCCTTTGCTATTGCCACTGACATTCAACTATCTAATTACCTCTATACAATCTTGTACTTTGTGTAATGAAGGGCTTCCGAAGATCTGCAGACTGTTCAAGTGCTAGATACCTTCCCAAAAGAAATTCTGAAACAAACAATTGGGTTCCCTACCAAGGTATCACCAAGTGCATCGTATATTTTATCATTGAACCCTTCACAAATTTCATCGAATAATTGTTATATCTTCATGACAGAACTCTAATCCATGCTGTTTTTGTTGCTTGACAGAAATGGGGAAGTGATCATATCGCTTTGGTTTGTGAATTAGCATTCACAAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001225