BGIOSGA001255

From RiceWiki
Revision as of 10:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001255| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001255, complete gene.| tag = P0681B1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001255

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001255, complete gene.

LocusTag

P0681B11.40

Ensembl Transcript ID

BGIOSGA001255-TA

Ensembl Protein ID

BGIOSGA001255-PA

Length

2237

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26705941..26708177

Sequence Coding Region

26708032..26708177,26707858..26707942,26706218..26706346,26705941..26706045

Genome Context

<gbrowseImage1> name=IndicaChromosome01:26705941..26708177 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:26705941..26708177 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGACGGCTGCGGCGTACGGCTGCCCGGCGGCGGCGGCGGCGGCGCCGTTCGCGGCCAGCGTCTCCCGCCGCCGCGCGCCCCTTTCCTGCGTCTCGCTCGCTTCCTCCTCCTCCCGCAGGCGCACGGCGGAGTTTCCCGGGTTGAGGGTTTCGTGTCTCCGTAGGATACTGGCTGTCTCTGCGTGCTCCGGGGAGGCTGATTCGGACGCGGGGGCTGCGCCGGCGGAAAGCACTTTTGATCTAAATCTTCCAAGAAGAAGCTTACTTGTTCAATTTACATGCAATGCATGTGGAGAAAGGACCAAGCGGTTGATAAATAGGGTTGCCTATGAAAGAGGAACAATATTTCTTCAGTGTGCAGGGTGCCAGGTGTACCACAAATTTGTTGATAATCTTGGTCTAGTTGTTGAGTATGATCTACGAGAAGAAAATGGGATGAACACCGATACTGAAACTTGA</cdnaseq>

Protein Sequence

<aaseq>MATTAAAYGCPAAAAAAPFAASVSRRRAPLSCVSLASSSSRRRTAEFPGLRVSCLRRILAVSACSGEADSDAGAAPAESTFDLNLPRRSLLVQFTCNACGERTKRLINRVAYERGTIFLQCAGCQVYHKFVDNLGLVVEYDLREENGMNTDTET</aaseq>

Gene Sequence

<dnaseqindica>1..146#236..320#1832..1960#2133..2237#ATGGCGACGACGGCTGCGGCGTACGGCTGCCCGGCGGCGGCGGCGGCGGCGCCGTTCGCGGCCAGCGTCTCCCGCCGCCGCGCGCCCCTTTCCTGCGTCTCGCTCGCTTCCTCCTCCTCCCGCAGGCGCACGGCGGAGTTTCCCGGGTGCGCGCCGCTGCTGCTGGCTTCTTCCTCCCTCTCGAGTCGAGCTCGGCTTCGTTTGGTGTCTGAGTTTGTGTTCTCTCCTCTCGCAGGTTGAGGGTTTCGTGTCTCCGTAGGATACTGGCTGTCTCTGCGTGCTCCGGGGAGGCTGATTCGGACGCGGGGGCTGCGCCGGCGGTAACTTTCTCCACTCCCTGCGTGCTTTCTGATCTGTTCCGATTGTAAGGGATGAACTAGCTTTGGGTGTTTTCTTGGAACGGATTAGTTGTGCTCTTGCTAGCTTTGGTGATGCTGATGCACCACCTCCAGTGAATTCAGTAGTATGTCCTATAAGAATGTAAAGATAAAAATCTTGCTCCTCTTGAGCCTGATCAGATGGAATTCCTACTGGGAGGCCCTAGGAACCATAGGGGATTTAGCAGGATGGAGAGATACAGAGCTCTTGGGGATTCATTGCAAGTTGATACAGTTGCATGCCATTTCTCTGTGCTGAGGGACATGTTCCCTAATGGTATGAATGCCCTGTGCATGTTCCCTAATGCCATTACTGATGTTCTAAATCCTACTGCTGAAAGAATTGAATCATTCATCAGATGATTTGGTTGCTATGACCTGGTGATCGGGGACAGCCTGTTGAACAACATTGCTGGTGATCGGGGACAGCCTGTTGAACAACATTGCTGGCAGCAACCGATACCACCATGATGGTTTGGAGGGTGAACATTATGTGCTTTTCTATCGCTATTCAGAATCATCGATGAAAATTCTAGTAGTTAGTTGTGGTAGGCTGGTAGCAGTTGTAATACAAACTCTCTGATAATGGATTTCGTTACCCAATCAGCAGCAATATGAATGTCTGCTTAAATTGTAGTAAGTTGTTAGGATATGTGACATGCAAATATATAACATTAGTATGGAGTGGAAATGGCATCCTGCATGTATATCTACATATAGGAGACATAGTCACATTACACCGTGCAAATATACTATGGGCCTGTTCACTTTGATGCCAAAAAAAACCTTGCCAAAATTTTGGTATAGTTGCCAAAATTTTGGCAAGATTTCTTATATAGTTACCAAAATTTGGTAGCAAACTAAATGTAGCCACTTTTTTTTGGCAACTTTACCAAAATTTAGTAAGGTTGAAAATGGCATCAAAGTGAACAGGCCCTATGTGAATTATGGATGATGTTCAACCTGGTGTCTTGATGTAGACTACTAAGTTATGATTTTTAACTTTGAGCTTGGAATAGGGTGTGGTGTTCCAGCATTCTTTTGTTCACCTCTTAAATGCACATATGTTTTGGTTCATAAAGATATGCTAATTGCTAAAAGGGTAATGTTTCATTAAATTTGTGTTTCTGGGCATTTTAGAGACTGATTTGTGCATATGACCTTCAAAAACAATATGCTGCATGGTGCGAAAATACGGAAAATAACACCTTGTTTTTTTCCTGATATGTCCTGTACAGCCATGGACTGTGCAACTTGACTGCATGGGCAGCTTCAAAAACTGAAAATAAATAACTCAAGTTAATAATAATATTTTGTGTAATTTACCATTTCAATGCCATGCAAGCGTCTTTCTTCAGATAGTTCATTATTCACCATATGAATGGAATGCGGGCATTCTTACTAATCACTACGCTGGAATGGCTTAAATGACAAAATTTTGTTTGATGTTACAGGAAAGCACTTTTGATCTAAATCTTCCAAGAAGAAGCTTACTTGTTCAATTTACATGCAATGCATGTGGAGAAAGGACCAAGCGGTTGATAAATAGGGTTGCCTATGAAAGAGGAACAATATTTCTTCAGGTAAGTTGTTTTGTCTGTTTACTTATTTGCAGCTTCATTCAGTCCAAATTTTATTTATACACTGCTCACATGCTTGCTTTTGTTAAATATGAGAAAAGACCACATGGATATGCCCGTTTGTGTCCAGGCATGCACTGTAAATTTGTGTTCTGATGTTACATTGCATATGCAGTGTGCAGGGTGCCAGGTGTACCACAAATTTGTTGATAATCTTGGTCTAGTTGTTGAGTATGATCTACGAGAAGAAAATGGGATGAACACCGATACTGAAACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001255