BGIOSGA001272

From RiceWiki
Revision as of 10:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001272| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001272, complete gene.| tag = OsJ_025...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001272

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001272, complete gene.

LocusTag

OsJ_02502

Ensembl Transcript ID

BGIOSGA001272-TA

Ensembl Protein ID

BGIOSGA001272-PA

Length

5326

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26411800..26417125

Sequence Coding Region

26415744..26417125,26414877..26415120,26411800..26412579

Genome Context

<gbrowseImage1> name=IndicaChromosome01:26411800..26417125 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:26411800..26417125 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCTCATGTGAAGCAGCCACGCTGGATGGATTTCAGCCCCGGATGCCATTGGCTGTAAAGCGAGCTCGAATACGCCGGGAATCCCATCCGGGCTGGGTAATGCTCGATTGCCGCGTCGGCGACATGAGCGGGGACGACGACCTTGGAGCAATCACCGTGGCAAAAGGAACCACCTCCACCGGCGACGGCATCACCGTTGCCTTCAGCGCGGCGGCTCCCCCGGCGATTTCCCGCCTCTTGTTCGCCTTGCATCCAAACAAGAACAGGCAGACCACGGACTCGTCGGACTCAGACTCCGACGAGAGCGATTCCTCCGCCAGAGGCAGAGTCATAGCGGCCCACGGCAACTCCGTCCTCCTGAGCTGCATCTTCAACGTCAGGGACCCAATAACGCCGTACGTTGCCTCCCTCCGTGAAGAGCTGTTCATCTACCAGCCCGCTCGCGCGGTTGATCTCACGAGGCTCCCCCCTTGCTACCATGGCGTCATCAACATTGACGGGAGTAGGAACATCGGGATACTGTGCCGCAACAACGGAGAGTTTGTTGTGGCTCACCTTGGAGGGATGACTTCAGTAGGAGATGGTGGCTCCGGTCTGCCGATCACTCGCCCAGTGGCAGCTAAGCTGTGCAAGTATGTTGGCGGCTTCTGGAGCACTAATTGGTTGCGAATCCATCATGCTGCCGGTGAAGACCAGGATTTGTGCTGGTGGGAGACTGACTTGGTCGTGCCTTTTGGTGATTCTTTGTGCTGGGTGGATTACTTGAGGGGCATATTGCTCTGTGATGTTTTCAGTCCAATCCCTGATTTCCGCTATGTCCGGCTGCCTGTGAATCCTTACCCAGGTTCGTATGATCAAGAGCTTGCCATGAGAGGATCCATGCATATGTATAGAAGCGTGTGCGTGACAAAAAATGGAGGCATGAAGTTTGTTGATGTGGCTTCCGAAGACACTTGGTTTTCTGCAGGCAACGACATAGAAAGCTGCCCTACTCCTTTCACTATCACCTCCTGGACATTGACCAGCGATCGTCTTTCGTGGATAAAGGATGCCTCTCTAGATGCTAATGTTTTTTTCTCCCTTGCCAGCAATGAACATCTTCCTCAGATTGTACCGGAATTCCCTCTTGTTGACATGGAAGATCCCAATGTCATCTACTTCGCATTGCCCCTGGAAGAAGGTTCTAATGATAAGGCAGCCTTCGTTGCACTTGACATGGTAAGGAGGACTCTAGGCCTGCGAAACACTTATACATTAAGAAGCACCTTGAAACCTGGTGACGACAACAGCTCAACAACCTCCTGCAACCTCTTTGGCAATGAGCCATTCCTACCTTTTGAATTCTCCAACTACCTGAATTTGGATGCGGCTTACAACAGAAGCAAGATTGTTGTTTGGAGCCTTGGACGTGGCAGCCGGGCAGGGCTTGATCACTTAATCCCAGGTATTCCAAAGGGGGACGATGAGCTCGATCGCGGTGATTCAACCGGCAGGGTGGCACAGAGTTGTGATGGCCTATGCGGTCATGCGGCGCGCGGTGGAATTGGGAACAATGCGTGCAGCACTGAAGGCGCAAAGACCTACTACACGCTGCAAGACGATAAGGCCATTCATAGTGCAAGGGAACGCCACAATCTAAACAACTGCTCACGGGTTGGCCCCCGCGTCGCCTCCCGCGTGGGCGACACGGGCGGCGGAACCCTAGCCGCCGCCGCCGCCCCACCCCACCTCTCACCCCCGCCTCGCCGCCGCCTGAGCGAGTGGCTGGCAAAGCCGGAGGCTCGCGAGGACAGCGGCGGCGGGGCTCGCGGCGACGACCACCATCAGAGCAGGCGCAGGCACCCACGGCGGAGGCCGGCCGGAGCAACACCGACGTCGAAGCCTGCGCTCAGGCAGAGGTGGAGGCAGGGTAGGAGGAGGCCGGCGAGCTCAGGAGGAGGCGGAGGCGGGGAAGGAGGAGGCCGGCGAGCTGGCGAGGAGCGGGGGCGCGGCCGGCGGCTTGAGGTCGGCACAAGAGGGGCCGGCGTGGACGCGCGGCCGGAGGTGCGGAGGAGTGCACCCGCGCTCCTCGGGATGGCTACGCGGAGGCCGGAGCAGCGGAGGCGCAGAGGCCGGCATGGAGGTTGGACTGTGGGGGGGCGCTGGAGCCGGAGCGGCAGCGTTTCCGGCGTCGGCGCAGGCCCAGATGGTAGTGCAAAGGGAGCTGGTGGCGGTGGGTCGCCTTCCTCGTTGCCGGTCGGCACCCTCGCCCTTCTTGGAGCTCCCTCCCTTCTTTGTGGGGAGTTTCTAGGTTGGATTGAGGCGGCAGGTTGTCAGCGGGGGAATGTCAGGATGCCGAAGCAATGCCGCCTAGTCCCGGATTCTTCTTTGGCCAGATCTAGCGAGGAGGCCGGCGGGTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MSSCEAATLDGFQPRMPLAVKRARIRRESHPGWVMLDCRVGDMSGDDDLGAITVAKGTTSTGDGITVAFSAAAPPAISRLLFALHPNKNRQTTDSSDSDSDESDSSARGRVIAAHGNSVLLSCIFNVRDPITPYVASLREELFIYQPARAVDLTRLPPCYHGVINIDGSRNIGILCRNNGEFVVAHLGGMTSVGDGGSGLPITRPVAAKLCKYVGGFWSTNWLRIHHAAGEDQDLCWWETDLVVPFGDSLCWVDYLRGILLCDVFSPIPDFRYVRLPVNPYPGSYDQELAMRGSMHMYRSVCVTKNGGMKFVDVASEDTWFSAGNDIESCPTPFTITSWTLTSDRLSWIKDASLDANVFFSLASNEHLPQIVPEFPLVDMEDPNVIYFALPLEEGSNDKAAFVALDMVRRTLGLRNTYTLRSTLKPGDDNSSTTSCNLFGNEPFLPFEFSNYLNLDAAYNRSKIVVWSLGRGSRAGLDHLIPGIPKGDDELDRGDSTGRVAQSCDGLCGHAARGGIGNNACSTEGAKTYYTLQDDKAIHSARERHNLNNCSRVGPRVASRVGDTGGGTLAAAAAPPHLSPPPRRRLSEWLAKPEAREDSGGGARGDDHHQSRRRHPRRRPAGATPTSKPALRQRWRQGRRRPASSGGGGGGEGGGRRAGEERGRGRRLEVGTRGAGVDARPEVRRSAPALLGMATRRPEQRRRRGRHGGWTVGGRWSRSGSVSGVGAGPDGSAKGAGGGGSPSSLPVGTLALLGAPSLLCGEFLGWIEAAGCQRGNVRMPKQCRLVPDSSLARSSEEAGGW</aaseq>

Gene Sequence

<dnaseqindica>1..1382#2006..2249#4547..5326#ATGAGCTCATGTGAAGCAGCCACGCTGGATGGATTTCAGCCCCGGATGCCATTGGCTGTAAAGCGAGCTCGAATACGCCGGGAATCCCATCCGGGCTGGGTAATGCTCGATTGCCGCGTCGGCGACATGAGCGGGGACGACGACCTTGGAGCAATCACCGTGGCAAAAGGAACCACCTCCACCGGCGACGGCATCACCGTTGCCTTCAGCGCGGCGGCTCCCCCGGCGATTTCCCGCCTCTTGTTCGCCTTGCATCCAAACAAGAACAGGCAGACCACGGACTCGTCGGACTCAGACTCCGACGAGAGCGATTCCTCCGCCAGAGGCAGAGTCATAGCGGCCCACGGCAACTCCGTCCTCCTGAGCTGCATCTTCAACGTCAGGGACCCAATAACGCCGTACGTTGCCTCCCTCCGTGAAGAGCTGTTCATCTACCAGCCCGCTCGCGCGGTTGATCTCACGAGGCTCCCCCCTTGCTACCATGGCGTCATCAACATTGACGGGAGTAGGAACATCGGGATACTGTGCCGCAACAACGGAGAGTTTGTTGTGGCTCACCTTGGAGGGATGACTTCAGTAGGAGATGGTGGCTCCGGTCTGCCGATCACTCGCCCAGTGGCAGCTAAGCTGTGCAAGTATGTTGGCGGCTTCTGGAGCACTAATTGGTTGCGAATCCATCATGCTGCCGGTGAAGACCAGGATTTGTGCTGGTGGGAGACTGACTTGGTCGTGCCTTTTGGTGATTCTTTGTGCTGGGTGGATTACTTGAGGGGCATATTGCTCTGTGATGTTTTCAGTCCAATCCCTGATTTCCGCTATGTCCGGCTGCCTGTGAATCCTTACCCAGGTTCGTATGATCAAGAGCTTGCCATGAGAGGATCCATGCATATGTATAGAAGCGTGTGCGTGACAAAAAATGGAGGCATGAAGTTTGTTGATGTGGCTTCCGAAGACACTTGGTTTTCTGCAGGCAACGACATAGAAAGCTGCCCTACTCCTTTCACTATCACCTCCTGGACATTGACCAGCGATCGTCTTTCGTGGATAAAGGATGCCTCTCTAGATGCTAATGTTTTTTTCTCCCTTGCCAGCAATGAACATCTTCCTCAGATTGTACCGGAATTCCCTCTTGTTGACATGGAAGATCCCAATGTCATCTACTTCGCATTGCCCCTGGAAGAAGGTTCTAATGATAAGGCAGCCTTCGTTGCACTTGACATGGTAAGGAGGACTCTAGGCCTGCGAAACACTTATACATTAAGAAGCACCTTGAAACCTGGTGACGACAACAGCTCAACAACCTCCTGCAACCTCTTTGGCAATGAGCCATTCCTACCTTTTGAATTCTCCAACTACCTGAATTTGGATGCGGCTTACAACAGGTAATGATGCGGCGCTTTTGTACTTTAACTTTTCCTGGTTGTGCATCACCTCGCTGTCTAATGGCTAGTTGTGTTAATTTTTCTAGGCATTTCCTTTCATGTCAATATATTGGAATTGGACAGTACAGATGTATATTGGGTGGACCGGCCCAGAGTGAAACTAAAATTGCAGCCCTTAGTGTAGGATAAAAAAATTGTTGCTCGGTGGACATGACATGATACCAAGTACAGGCTAATAATAGAAAAAAATACATATTAGCGGTCAGACACTAACTCAAAAATACAAAATGATAAAAAATATATCATATTAATTAAAACAATCTTACCAATCATTATGTTGAACTAGCAAATCGATCACTCACTGTAGCATGTATGATTGTATGCTTGATTAATCAATTCATCCCTTGATGGCTTATTGTAATTAATTATGTGAAAAACAGATTGATCATCCCTTAGTTTGGAACTCTCACTAGACGGCACTGACCCTTTTGGTGGTTCCTAATCCCCTCACCCTGATTATCACATATATGATTAGCAATCCCCAACATGAAGTAATGAAATGGAATTGAAATCCGACTCACTCTGCAAGATTAAAACACTGACTACATGTGGACAAAATGAAGAAGCAAGATTGTTGTTTGGAGCCTTGGACGTGGCAGCCGGGCAGGGCTTGATCACTTAATCCCAGGTATTCCAAAGGGGGACGATGAGCTCGATCGCGGTGATTCAACCGGCAGGGTGGCACAGAGTTGTGATGGCCTATGCGGTCATGCGGCGCGCGGTGGAATTGGGAACAATGCGTGCAGCACTGAAGGCGCAAAGACCTACTACACGCTGCAAGACGATAAGGCCATTCATAGTGCAAGGGTCCTATTTTGCGGGTCTTAGCTCAAAAAATTAGTCCAAAGACATCGTTCCCCACAGTGCAAGGATCCTATTTTACGTGACCTAGTTGGATTTGGACACTGTACAAGGAAACCGGCGCCCACAACGCTCGTCACTTGGTGGAGGGTAGTGAGGGGACCGAAGGAAATTAATTTCCTCACCTACCCCCGTCTTCTCCTCTCTTTCTCCTCCTCCATTGTCTTCACCACTGCTTCCTCCCACTCCGCCTCCGCCGCCGTGCCTCCTCCTCTCCCACGCTGCCACGCCTCCTCGCCTCCCACGCCGCCGCGCCTCCTCTCCCTCGATCTTGGCGGCGGCTCGCCGGTGCACGGGCGGCCGCCGGTTCTTGGCGGCACGGGGACGCCGGTTCTTGGCTCGGCTGCGGCTTTGACCAAAGACGACGCGCCGATGCAGCCCGGGTTTGGATCCGAATTGTGGTGGCGGTCGTCGGCCTGGGCCCAGATTCACGGCCGGATTTGGGGGTCGTGGCGGCGGATGTGGTGGCCGCGGCGGGGGCGGCGCCGGGAGCGGACAGCGCGATGCCGATGGGAAGCTGCGGCGTAGAGGAAGCGGGCGCGCAGCGGCGAGTTGCCTCCTCGCGGATGATCTGATGATGGATTGGCTCCAACTACTGTACAACTTAGGGGATTATTGATTGTTGTTTTTGTGCATGTGAGATGTGTTGTTCATTGGTTAATATGAGATCTAGTGCCCTAGATTTCTCGTGTTCTTGGGACGGATTGAGATTTCTTTGTTTCTTTTGCTTCTTGGTGATTCCTCTTGTGTTCTTGGGACGGATCGAGTTCTTTTTTCTGCGTTCTTGCTTGGGATGTTTCGGTGGCGGGAAGAATCGTGGGCAAATCGGGGTTTTCTCCACTCGATGCTGCGCGAGGGCACGGCGCGGCCAAGAACCGCACCCCACAGCGCGCGCCTCGCGTCTTCCTCTCCTTCTCGCGTCCTCGTTTTGGTGAGGTTTTGCACGGCTGTGCTTGGGGGCGAGGAGCTCTGCTAGGGTGTGATTCCTTCTGCCACATATGCTTCAATCCAAGCTGGCACCGTGTAGCACCGGTCCAGCTCACCGCACTGTGAGATACCTAAGGCCCTAAACTTGTTGACCTGACGACCTGTGCTAGTACTAGGTGGGCCCCCTGATTTCTGGGGGCCAGAGTGGGTCCCCCCTCTTGCCCCCCTCAGGGCTGGGCTGATATCGAGTCATGTTATTTGGCACTCGCATGGCCCTACAGCACTATGTTGCTTGGCTCCTGAAGATTCTTTGGTGGTGCTACATTGCTTTCTTGCTGCTCTATAGTGCTTCTTAAGTGATCTCTGTAGAGAGGGAACATTTTTTTTGGATATGCACTATAGGAGGTGAAAATTATGTATACAAAGTAAGGAAAAGAAGAAAAGATATTCCATGAAACATACTTGCGGTTTCCCCCATCACAATTCACTTCTTATGGCATATTTCCGTTAATAAATGATAGTATGCCTTTGTTAGTGCTAGAGAAATTTGTTGCATGTATGTTTGGCTGATCTGACTTGCGAGTCATAACCAATGTTTGTTCTGATAGTTCAAAGGCATATATTTTGTTACTGCTGCTGCTGCTGCTTGTTATATACATTTAAAACAAATAAAATCAGGTTAGCTGGCAGAATATGACCCTTTTCTTGTTCCCCCCACCCCTTCCTCTCTCTAGATACCTTAGATTCTAGAGCTGTAACTACAGGAGGGTATTTTATCAGTTGGCATCAGATTCTGGAGGAGGCTACATCCTTGAATGACATCTAATTGGACAGTACACAATCGATTAGTTGCCATCTCAAAGTATTCTTCTTTTGACCATCAATTGTATCATGATTTCCCATGCTTCACGGTAGGCTGCTTTGTAGTAGCCTAATTACAGTAAGCTAAAGAGAAGCCTTGTAAACAAGCAAGTCCTTTAATAATCCCTGGGCCAGTTATGAACTTAAACACCTCTATCATGATATGCTTGTATTTAGGATATCCAATGCAATGATTTTCAGTGAACCCTATGCTGTGTTATGAATGTCACGCACACTTGGTTCTCAAAGTCCAAATTATGTCAATTCCTAGACTCCAAAAAAGAGGAACATGGTGGAGTCAGGGTTTGGATCTGTACTGTCACACACAAGTGGAGGCGTGGAGCTTCCAATGAATTCTCTTGAAATTTCTTTCCACCAGTTGATTGTTCTTCTTTCCACCAGTTGATTGTTCAGCACACTTCTGCAAGTGCTTGTCCTAATGGACCTTTCCAAAGGAACGCCACAATCTAAACAACTGCTCACGGGTTGGCCCCCGCGTCGCCTCCCGCGTGGGCGACACGGGCGGCGGAACCCTAGCCGCCGCCGCCGCCCCACCCCACCTCTCACCCCCGCCTCGCCGCCGCCTGAGCGAGTGGCTGGCAAAGCCGGAGGCTCGCGAGGACAGCGGCGGCGGGGCTCGCGGCGACGACCACCATCAGAGCAGGCGCAGGCACCCACGGCGGAGGCCGGCCGGAGCAACACCGACGTCGAAGCCTGCGCTCAGGCAGAGGTGGAGGCAGGGTAGGAGGAGGCCGGCGAGCTCAGGAGGAGGCGGAGGCGGGGAAGGAGGAGGCCGGCGAGCTGGCGAGGAGCGGGGGCGCGGCCGGCGGCTTGAGGTCGGCACAAGAGGGGCCGGCGTGGACGCGCGGCCGGAGGTGCGGAGGAGTGCACCCGCGCTCCTCGGGATGGCTACGCGGAGGCCGGAGCAGCGGAGGCGCAGAGGCCGGCATGGAGGTTGGACTGTGGGGGGGCGCTGGAGCCGGAGCGGCAGCGTTTCCGGCGTCGGCGCAGGCCCAGATGGTAGTGCAAAGGGAGCTGGTGGCGGTGGGTCGCCTTCCTCGTTGCCGGTCGGCACCCTCGCCCTTCTTGGAGCTCCCTCCCTTCTTTGTGGGGAGTTTCTAGGTTGGATTGAGGCGGCAGGTTGTCAGCGGGGGAATGTCAGGATGCCGAAGCAATGCCGCCTAGTCCCGGATTCTTCTTTGGCCAGATCTAGCGAGGAGGCCGGCGGGTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001272