BGIOSGA001293

From RiceWiki
Revision as of 10:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001293| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001293, complete gene.| tag = OsI_026...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001293

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001293, complete gene.

LocusTag

OsI_02677

Ensembl Transcript ID

BGIOSGA001293-TA

Ensembl Protein ID

BGIOSGA001293-PA

Length

1013

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25945429..25946441

Sequence Coding Region

25946337..25946441,25945943..25946246,25945429..25945799

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25945429..25946441 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25945429..25946441 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCAGAGCGGCGGCGGTCGCCGTCCTCCTCCTCGCCGTGGCGGCGGCGCCGCTCTTCGCCGCGGCGAGCGCGCATGGCCGAGGCTACCTTGGTGCCGAGTCCTGGCCTCCTGACGGCAGCCTGAGCTCATCAAGCTCCGGCGAGGCTGCAGCGGCGGACGTCGACGACGGCCACACGGACTGGAAGTGCTACTCCTCCTGCATGAGCAAGTGCTGTCACCGCCACGACGACGACGACGACGACAAGGCCAATGCCAAGGCCAACGCCACCGCCGGCGCCGCCGCCGTCGGCCTCGACGATGACTACAAGTGCAAGAAGCAGTGCCTCGGCAACTGCTTCAAGGACGTGCCGGCCGTTTGCTACCACAAGTGCGTCGACGACTGGTGCGCGAAGCTGCCACCATATAGTTCCGCGAAGGTGCAGTGCTACAAGAAGTGCGGCGATAAATGCTTCCACCACGGCCCGAAGCCTGGGCCCAAGCCCAAGCCGAGCCCACCAAAACCCAAGCCTGGACCGAAGCCTAAACCTCCCAAGCCTGGGCCGAAGCCGAAGCCTCCCAAGCCAGGGCCGAAGCCGAAGCCGAAGCCTCCAAGCCAGGGCCGAAGCCGAAGCCGCCGAAGCCCGGGCCGAAGCCGAAGCCAGGGCCGCCACAGCCCTGGTGGCCTATACCATTCCCGAAGCCGCCGTGTCCCCCCGGCGCCGACGGGTCGTCGTCGGCGGTCGACGACAAGAACAACTGATCACACATCATACCTAAATTATACATATGATTAA</cdnaseq>

Protein Sequence

<aaseq>MASRAAAVAVLLLAVAAAPLFAAASAHGRGYLGAESWPPDGSLSSSSSGEAAAADVDDGHTDWKCYSSCMSKCCHRHDDDDDDKANAKANATAGAAAVGLDDDYKCKKQCLGNCFKDVPAVCYHKCVDDWCAKLPPYSSAKVQCYKKCGDKCFHHGPKPGPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPSQGRSRSRRSPGRSRSQGRHSPGGLYHSRSRRVPPAPTGRRRRSTTRTTDHTSYLNYTYD</aaseq>

Gene Sequence

<dnaseqindica>1..105#196..499#643..1013#ATGGCCTCCAGAGCGGCGGCGGTCGCCGTCCTCCTCCTCGCCGTGGCGGCGGCGCCGCTCTTCGCCGCGGCGAGCGCGCATGGCCGAGGCTACCTTGGTGCCGAGGTACGTACCGACACCCCGACAAATTAATTGGTTGTCCACATTAAGACCAAATTTACTGATTAATTGTATCTGAATTCTTGTGTCGATTAGTCCTGGCCTCCTGACGGCAGCCTGAGCTCATCAAGCTCCGGCGAGGCTGCAGCGGCGGACGTCGACGACGGCCACACGGACTGGAAGTGCTACTCCTCCTGCATGAGCAAGTGCTGTCACCGCCACGACGACGACGACGACGACAAGGCCAATGCCAAGGCCAACGCCACCGCCGGCGCCGCCGCCGTCGGCCTCGACGATGACTACAAGTGCAAGAAGCAGTGCCTCGGCAACTGCTTCAAGGACGTGCCGGCCGTTTGCTACCACAAGTGCGTCGACGACTGGTGCGCGAAGCTGCCACCATGTACGTAATAAACTAACACTTCGCAACGATAATTCAAGCCTTAATCAATCACACACACACACACATATATATATATATAGCTATGTAGTAATTAAGTGTAAATCTGTTCATCATGTGCTGCTTTTTCTTGTGTGCATCTGCAGATAGTTCCGCGAAGGTGCAGTGCTACAAGAAGTGCGGCGATAAATGCTTCCACCACGGCCCGAAGCCTGGGCCCAAGCCCAAGCCGAGCCCACCAAAACCCAAGCCTGGACCGAAGCCTAAACCTCCCAAGCCTGGGCCGAAGCCGAAGCCTCCCAAGCCAGGGCCGAAGCCGAAGCCGAAGCCTCCAAGCCAGGGCCGAAGCCGAAGCCGCCGAAGCCCGGGCCGAAGCCGAAGCCAGGGCCGCCACAGCCCTGGTGGCCTATACCATTCCCGAAGCCGCCGTGTCCCCCCGGCGCCGACGGGTCGTCGTCGGCGGTCGACGACAAGAACAACTGATCACACATCATACCTAAATTATACATATGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001293