BGIOSGA001326

From RiceWiki
Revision as of 10:19, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001326| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001326, complete gene.| tag = OsI_026...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001326

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001326, complete gene.

LocusTag

OsI_02615

Ensembl Transcript ID

BGIOSGA001326-TA

Ensembl Protein ID

BGIOSGA001326-PA

Length

2080

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25436118..25438197

Sequence Coding Region

25437997..25438197,25437634..25437877,25436986..25437104,25436725..25436884,25436407..25436604
,25436118..25436224

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25436118..25438197 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25436118..25438197 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAATCTTCTAGAGGAAGCAAGGCAATCTCGCCTTTGTCCCCTATACAGCCCGCCCCTAGTTTTCTCCTTCCTCCAAACCCACCATATGCGACCCTTCGCTCATATATACCCAATCGGCCGTTCCTCACCTTTGTGCCTACTCTAATTGCCTCATTTCCTCACCGCTTCTACAATCTCAATCATTGGGTTCCTTTTGGGGTCTGTTACGCGATGAAACGGGCAGGGAGCAAGGGTGTTTTGGAGTCATCCTCCTCATCATCCAAGAAGACCACCCGCCGTCAGAAGAAACCGCCTACTTCCTCTCTTGAAGAACTAGAACTGCCAAACTCGGCGATGAACAAGATCCAAGAAGTGCATGACATAGCTAGGGATGTGTTCTCTACAGCCACGCCAGGCTTTGTTCCATCACCGTTAGCCGAGGCAAACCTCACCAAGTTGCTCGATACCTTGAAGCTAGAGGATTTTGGGCTTGATGCAAGCATGCCGTATTTTAGAGCTGATCCTCAAGGGCATCCTAAAGTAACATATGTGCACTTTGGTGATGATAGTCTTAACTTCTCGTTTGGTGTGTTTTGTCTACCACAATCGGCTGTCATTCCACTCCATGACCATCTAGGGATGACTGTCTTTAGCAAAATTCTTCATGGCTCAATGCACGTAAAGTCGTATGACTGGGTTAAAACTCCCAATGGTAAAAATCGTATCTGCAGGGAAATAGATGGTGCTCATTTTGCTAAGGTGAGAACTAACACCATCTACGATGATTCATCTAAGACAACGGTTCTATACCCAGAGAGTGGAGGAAACCTTCATTGCTTCACTGCAGAAACTGCTTGTGCAGTGCTTGATGTCATGGGCCCACCATATTCCTCAGTAGAAGGAAGGGACTGCTCATACTATGGAGTGTGTCCTTCGCCACGTGGAGTAAGCAGGCGGATTACTGATGAACTATCTGATTGGTTGAGAAAAGAACATTGCACTTTTAATATGAACGCTGTGCTTGTGAAGCCAAGTACAATGACTTGA</cdnaseq>

Protein Sequence

<aaseq>MESSRGSKAISPLSPIQPAPSFLLPPNPPYATLRSYIPNRPFLTFVPTLIASFPHRFYNLNHWVPFGVCYAMKRAGSKGVLESSSSSSKKTTRRQKKPPTSSLEELELPNSAMNKIQEVHDIARDVFSTATPGFVPSPLAEANLTKLLDTLKLEDFGLDASMPYFRADPQGHPKVTYVHFGDDSLNFSFGVFCLPQSAVIPLHDHLGMTVFSKILHGSMHVKSYDWVKTPNGKNRICREIDGAHFAKVRTNTIYDDSSKTTVLYPESGGNLHCFTAETACAVLDVMGPPYSSVEGRDCSYYGVCPSPRGVSRRITDELSDWLRKEHCTFNMNAVLVKPSTMT</aaseq>

Gene Sequence

<dnaseqindica>1..201#321..564#1094..1212#1314..1473#1594..1791#1974..2080#ATGGAATCTTCTAGAGGAAGCAAGGCAATCTCGCCTTTGTCCCCTATACAGCCCGCCCCTAGTTTTCTCCTTCCTCCAAACCCACCATATGCGACCCTTCGCTCATATATACCCAATCGGCCGTTCCTCACCTTTGTGCCTACTCTAATTGCCTCATTTCCTCACCGCTTCTACAATCTCAATCATTGGGTTCCTTTTGGGGTAGGTTTTAATTAATCGTATTCATGTTCTTGTTGATTCTTTTGGTGATTTTGTTTATAGTTTTGGTGATTGAAAAGGTCATTTCTATATTGGAATTGTAGGATTTAATTTTTTTCTAGGTCTGTTACGCGATGAAACGGGCAGGGAGCAAGGGTGTTTTGGAGTCATCCTCCTCATCATCCAAGAAGACCACCCGCCGTCAGAAGAAACCGCCTACTTCCTCTCTTGAAGAACTAGAACTGCCAAACTCGGCGATGAACAAGATCCAAGAAGTGCATGACATAGCTAGGGATGTGTTCTCTACAGCCACGCCAGGCTTTGTTCCATCACCGTTAGCCGAGGCAAACCTCACCAAGTTGCTCGGTTAGCAGTCATCTTCTTGTCTTTGCATCTATATCATGCGCATACCATCTTATATCTAGAAATGCCCGTCACTTTGAGCTTTGCATGAGCATGACTATACTCTGAGCTTTTATGGAGGTTAGTCTGATTTAGTGGTTTTTATTTCATACACGTATTCTTACAAGATTTTAATCCATAAATCTCAGGCATGATCTTTTATTGGTGGTTGCATTGTCCACTGCGTCTCTTTTCATATGGACATTTTCCTGCGATAGCAATGGTTGTTGTAATTGCCTACTATGCAATGTTTTCATCGCACATATTGAAATATGCTAGCTAAAAGTGTATCTAATTATGTGATCTGATAGAGGAAGTTACATATATATTTTTTGTTCTTGTGGATGCTGCATAAATATGAGAATTTGTTGGGAATGTAATGGAAACGTTTTGCTTCCAATTGATAATTGTTTTCAAGAAATCCAATTCATAATTTTTAGCTACATGCACTTGTGGTATTCACACAAATCAACACATTAACCCATTGATGCAGATACCTTGAAGCTAGAGGATTTTGGGCTTGATGCAAGCATGCCGTATTTTAGAGCTGATCCTCAAGGGCATCCTAAAGTAACATATGTGCACTTTGGTGATGATAGTCTTAACTTCTCGGTAATTTAGTACTTCACATTTTGTTGACATTGAATCATGGAAAATGTGTCTATTTAGTGTAAACTCCACTTAGATGACACATTTTACACATTTTTTTGTAGTTTGGTGTGTTTTGTCTACCACAATCGGCTGTCATTCCACTCCATGACCATCTAGGGATGACTGTCTTTAGCAAAATTCTTCATGGCTCAATGCACGTAAAGTCGTATGACTGGGTTAAAACTCCCAATGGTAAAAATCGTATCTGCAGGGAAATAGATGGTTAGTTTGAGTGCTTTTCTCGCTAACATATTCACTCTTTTTTCTCTCTCACATGTTCCCATTTACACCACATTTTTTCACAAGTTTTTTTTTTCTAATATCCAGTCTTCTAAAATACAGGTGCTCATTTTGCTAAGGTGAGAACTAACACCATCTACGATGATTCATCTAAGACAACGGTTCTATACCCAGAGAGTGGAGGAAACCTTCATTGCTTCACTGCAGAAACTGCTTGTGCAGTGCTTGATGTCATGGGCCCACCATATTCCTCAGTAGAAGGAAGGGACTGCTCATACTATGGAGTGTGTCCTTCGCCACGTAAGCTCTAAAATTTTCCAATTTGTTCTATCTATTACTAGTTATTTTGGCATTATAAATATTTTATACCCCCGATATCTGCCATAAGATACACAACCAAATTCTTTGTATTAGCTAAGTTTATGTAATATTTGAACACTAAATGTTAGTTGCTAATTTGTGTGACTTTTTTTTAACCGTAGGTGGAGTAAGCAGGCGGATTACTGATGAACTATCTGATTGGTTGAGAAAAGAACATTGCACTTTTAATATGAACGCTGTGCTTGTGAAGCCAAGTACAATGACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001326