BGIOSGA001328

From RiceWiki
Revision as of 10:19, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001328| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001328, complete gene.| tag = OS01G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001328

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001328, complete gene.

LocusTag

OS01G0586600

Ensembl Transcript ID

BGIOSGA001328-TA

Ensembl Protein ID

BGIOSGA001328-PA

Length

2657

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25418946..25421602

Sequence Coding Region

25421578..25421602,25420816..25420977,25420293..25420735,25419682..25419948,25419344..25419516
,25418946..25419255

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25418946..25421602 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25418946..25421602 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGAGGCACCGTAGTACTAAAATGGATCGACCTGATGAAACCGTGAAATTCCCAAGCTGTGATGCGTATTTTGACACTATACAGTCCAAGAAGAAGCTGCCCCTCTCTTTGCAAGAATCGCTCACTGCTGCCTTTGCTCAGATTCCTGTCTCGTCTTTTCCTGATGTTCCTAATGGCCGAGTGATTGAAATTCCAGGAGACACTTCCGTTCTTGACGCTGTGAGAATTCTCTCCAAACACAACATTAGGGCAGCGCCAGTGCTAAATCCGGAATGTGGAGCTCCGGCTGATTGGAAAGGGAGGTACCTTGGCATCATTGATTACTCGGCTATCATCCTCTGGGTTCTAGAAAATGCTGAGATTGCCGCCGTTGCTCTATCAGCTGGGTCAGCAACCGCGGCAGGAGTTGGAATGGGTGCTGTCGGTGCAGTGGGAGTGGCAGCATTGGGTGCAACTGGTCCTGCAGCTGTTGCTGGCTTGACTGCCGCTGCAGTAGGGGCTGCTGTTGCTGGTGGGTTAACAGCAGAAAAGGGTGTGGCAAAGGATGGACTAACTGCTGCTGATCATTTAGGAGAAGATTTCTACAAAGTTCTGCTTCAGCAAGAACCTTTCAAATCAACTACAGTTCGATCAATTGTAGAATCCTACCGCTGGTCTCCTTTTGTCCCCATTACACTGGACACTTCAATGCTTACTGTATTACTGTTGCTATCCAAGTACAGGTTAAGGAATGTCCCAGTGATTGAGCCTGATAAGCCAATTATTAAGAACTTCATTACTCAGACTGGTGTTGTTAAAGGACTTCAGCAGTGCAAAGGAAGGGATTGGTTTGATTATATTTCAGCGCTCCCTCTCTCGGACTTGGGACTTCCATTTATGTCACTTGATGAGGTTATCACTGTTAACAGTGGTGATCTAATCTTGGAAGCTTTTAAGTGCATGAAGGACAACAAAATTGGTGGTGTGCCTGTAGTAGAAGGTCCCAACAAAAAACTTGTTGGCAGTGTGAGCATAAGGGATATTCGCTTTTTGTTACTTAGGCCTGACTTGTTTTCGAATTTCAGGCAACTTACTGTCATGGAGTTCATGAAGACCATAGGTTCCACCGTTTCTGATTCAGGGAACGGCCTGGTGAAGCCACCTCTCACCTGTTCGCCTGACGCTTCTCTTGGCAGCGTGATTGACAGCATTGCATCAAGAATAACCCACCGGATATACGTCGTGGACGGTGACTTCGAGGTTGTTGGTGTCGTGACACTGCGAGACGTGATCTCTTGCTTTATCTATGAGCCTCCTGGTTACTGTGACAACTATTTGGCATCAGCCATGGATAAGCTTGAGGAGAAAGGTGCAGGTTCTGTGGACACAAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MAARHRSTKMDRPDETVKFPSCDAYFDTIQSKKKLPLSLQESLTAAFAQIPVSSFPDVPNGRVIEIPGDTSVLDAVRILSKHNIRAAPVLNPECGAPADWKGRYLGIIDYSAIILWVLENAEIAAVALSAGSATAAGVGMGAVGAVGVAALGATGPAAVAGLTAAAVGAAVAGGLTAEKGVAKDGLTAADHLGEDFYKVLLQQEPFKSTTVRSIVESYRWSPFVPITLDTSMLTVLLLLSKYRLRNVPVIEPDKPIIKNFITQTGVVKGLQQCKGRDWFDYISALPLSDLGLPFMSLDEVITVNSGDLILEAFKCMKDNKIGGVPVVEGPNKKLVGSVSIRDIRFLLLRPDLFSNFRQLTVMEFMKTIGSTVSDSGNGLVKPPLTCSPDASLGSVIDSIASRITHRIYVVDGDFEVVGVVTLRDVISCFIYEPPGYCDNYLASAMDKLEEKGAGSVDTS</aaseq>

Gene Sequence

<dnaseqindica>1..25#626..787#868..1310#1655..1921#2087..2259#2348..2657#ATGGCCGCGAGGCACCGTAGTACTAGTACTAGCTAGCAATCGAATCCATCTCCCTCCTCCTCCTCCTCCTGGATTGCCGCCGCCGCCCACGGTTTCCAGCAATCGCCGCGGTTCGCGCCGCCGCCGCCGAGCGGAGCAGCGCCCCGATCGATCCCCTTCCCCTCCCGCGAGCAACCGACGCCGGCGGAAGTCCCAGCTGCTTCCGCCACTTCGCCCGGTGAAGCATCCGTACTCACGCTCATCCTCTTCCTCATCTCTCTTTGCGGTCTTTACTACCCACTACGCCTAACCCCCTTTTCTTTTTTCTTCTCGGATTTCGTTAGCCTTAGCTTCTCTTCCAGATCCGCAAGCAATTTTCTTGAATTGGACCTAACCAGAGTAAGAGTAGCAGTTTGTTAGGATTGGATTGGGAGTGTTAGCCCCTGATTAGTTGACAGGAGTAGATTAATAGTGTACCTCCGTTGAACTTGTGATGAACTTTGCTAATATATGCCAAAGTGGCTTGTCGTGATTGGGTTAGTTATGAGTATCTACTGTGCCATGATAGATTAGATGCGTGTCCAGATGCTGCCATCTACTGGGATTAATGTTTGAGTGAGTTTTGTTTTTTTTGTTTTTTGTGTAGAAATGGATCGACCTGATGAAACCGTGAAATTCCCAAGCTGTGATGCGTATTTTGACACTATACAGTCCAAGAAGAAGCTGCCCCTCTCTTTGCAAGAATCGCTCACTGCTGCCTTTGCTCAGATTCCTGTCTCGTCTTTTCCTGATGTTCCTAATGGCCGAGGTACACACGTCTGCAAGACAAAATTAACTAACTAGTTGTCCGCGCCATGTATTTTTTTGATCCCTCACATTGCATTGCAGTGATTGAAATTCCAGGAGACACTTCCGTTCTTGACGCTGTGAGAATTCTCTCCAAACACAACATTAGGGCAGCGCCAGTGCTAAATCCGGAATGTGGAGCTCCGGCTGATTGGAAAGGGAGGTACCTTGGCATCATTGATTACTCGGCTATCATCCTCTGGGTTCTAGAAAATGCTGAGATTGCCGCCGTTGCTCTATCAGCTGGGTCAGCAACCGCGGCAGGAGTTGGAATGGGTGCTGTCGGTGCAGTGGGAGTGGCAGCATTGGGTGCAACTGGTCCTGCAGCTGTTGCTGGCTTGACTGCCGCTGCAGTAGGGGCTGCTGTTGCTGGTGGGTTAACAGCAGAAAAGGGTGTGGCAAAGGATGGACTAACTGCTGCTGATCATTTAGGAGAAGATTTCTACAAAGTTCTGCTTCAGCAAGAACCTTTCAAATCAACTACAGTATGCATTTTACTCTATGATGAATTATTATGCATATTTGGATTTTTTTTTCCTTTTTGTTAAATGTCGATCATTTATAGAGTCCAGTCAGTCTCAAATTATTTGGTATATATTTTACCCTGAACCACTGTTCTGCTGTGTGGCTACACCAAAGTTTGGCTATCCTAGTTACAATATATGCCGCAGCTTGGCGTGATTGAAAACTTCCTGTGATTTTCTTAGCTGCAACTTATTGCTGCTAATAATAGTTTGGATATCTGTCCTCTTTGCCTCATTTGAATATTGCATGATGATCTTCTGATGTAAATCCTGCTAACCTTCATATTTTTTTCTCATTATTATAGGTTCGATCAATTGTAGAATCCTACCGCTGGTCTCCTTTTGTCCCCATTACACTGGACACTTCAATGCTTACTGTATTACTGTTGCTATCCAAGTACAGGTTAAGGAATGTCCCAGTGATTGAGCCTGATAAGCCAATTATTAAGAACTTCATTACTCAGACTGGTGTTGTTAAAGGACTTCAGCAGTGCAAAGGAAGGGATTGGTTTGATTATATTTCAGCGCTCCCTCTCTCGGACTTGGGACTTCCATTTATGTCACTTGATGAGGTAATTGTGTCTCCCTAATCCAATTCTTTACTAATGAGAAATCATGTCTGCCTACATTATCAAGATAAAAGTTATATCTCAAGCTGAAACATACTACAATGTAATTTTTTTTTTCTCTTCACTTTGCAATAAACTGGTAGTTGAACAATTTTGTGCTTTCTTCAGGTTATCACTGTTAACAGTGGTGATCTAATCTTGGAAGCTTTTAAGTGCATGAAGGACAACAAAATTGGTGGTGTGCCTGTAGTAGAAGGTCCCAACAAAAAACTTGTTGGCAGTGTGAGCATAAGGGATATTCGCTTTTTGTTACTTAGGCCTGACTTGTTTTCGAATTTCAGGTATCAAACCATCCGGCTATTTGTTACCGCGTGAGTCATTTTCAAAATTTTGCATTTCCATGTTCCTAATGATAAATCTTCCATACAGGCAACTTACTGTCATGGAGTTCATGAAGACCATAGGTTCCACCGTTTCTGATTCAGGGAACGGCCTGGTGAAGCCACCTCTCACCTGTTCGCCTGACGCTTCTCTTGGCAGCGTGATTGACAGCATTGCATCAAGAATAACCCACCGGATATACGTCGTGGACGGTGACTTCGAGGTTGTTGGTGTCGTGACACTGCGAGACGTGATCTCTTGCTTTATCTATGAGCCTCCTGGTTACTGTGACAACTATTTGGCATCAGCCATGGATAAGCTTGAGGAGAAAGGTGCAGGTTCTGTGGACACAAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001328