Os11g0282700

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Revision as of 09:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0282700| Description = Homeodomain-like containing protein| Version = NM_001074226.1 GI:115485100 GeneID:4350282| Length = 4345 bp| Defini...")
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Gene Name

Os11g0282700

Description

Homeodomain-like containing protein

Version

NM_001074226.1 GI:115485100 GeneID:4350282

Length

4345 bp

Definition

Oryza sativa Japonica Group Os11g0282700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:10126374..10130718

Sequence Coding Region

10126411..10126602,10128691..10129485,10129577..10129847,10130403..10130689

Expression

GEO Profiles:Os11g0282700

Genome Context

<gbrowseImage1> name=NC_008404:10126374..10130718 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:10126374..10130718 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtcgatcgaaacgggaagttgccccgccacctcaagctttgccggcatccttcccatctggcatgtggctggctactccgccgatgcaggcctcctttgctcccggtggctggcaaggtacagcggctgcacctggtggctggcaaggtatggcgccaccgcagccgccgcaggctccattatttgcatacggcgccaatacttctgctccccatctggcccagatgaagcaagggtcagatcgtagttccatggacgattccttgtcagatctgcaagaaagtggtatggactcacgtccacctggtggattcttaagttactttcaggatccatcaagtttacagaatcatcaaccttctataccactaaattattatgctactcagcaagcagcaccatgggcaccttcacctgcagaataccgaagtccagttacaaaatcaggtccaggagaacaacaccctatcaacattgatagtggtggtgaagaaacccccactgttaggactgagaagcggttgacatggacacatgaagaggacataaggctagtgagtgcttggttgaacaacttgaatgattcgatcaatggtaatttcaagaaaaatgattgttattggggagatgttacaactgcctacaatagcaccactccgagaaataggatgaggcaagaaaaacaaatcaaggaccgctttcataaaattaagaaaaatgttggccgtttttgctgtgcttataaggaggtgaaatctatctatgttagtggacaaaatgaactacaattgatggagaaggtccatgcaacatatgaagcagattacaaggaaggccaatttacatttctgcattgttggaaagctctccgtgaccaaccaaagtggcatgcttacttggaggaacttgagaagccaaacaaaacaaagtcagataatgaagtggaagtaagggaacttacatccactcctaatagccctgaagatattatacgtcctgaaggaaccaaagctgctaaggcgcggcgtaatggtaaagacaaacgcaaaaggaaggcaaaggtttatctatcggatatggatgatgagattgacaagcctaaagaagttcagaacatggcagataaaggtcgcgatgagctactggagactcagaggcgtgtttctagtgagaatcttgaatcaaaaaggttagctcacctggcagccatggagcacaaggaggcggttatgttggaaacatatcgggctctcatgttgcaagatacaaaagatatgcctgatgatgtcagatttgagcatgtgatggcattgaagagtatgagggaaaagttgtttcctaaaactaaggtatcgaagatgctcattttggctgcttgttttggcagtgcttcagcaagagaagctacttattacataattttcagtaatccaccgattttatcaaaacagaacttgtgttctaactatctactcagtatgtcgttgtatgggtcactgttatggcctatgaatgatgtatggatcattgtaatagactaa</cdnaseq>

Protein Sequence

<aaseq>MGRSKREVAPPPQALPASFPSGMWLATPPMQASFAPGGWQGTAA APGGWQGMAPPQPPQAPLFAYGANTSAPHLAQMKQGSDRSSMDDSLSDLQESGMDSRP PGGFLSYFQDPSSLQNHQPSIPLNYYATQQAAPWAPSPAEYRSPVTKSGPGEQHPINI DSGGEETPTVRTEKRLTWTHEEDIRLVSAWLNNLNDSINGNFKKNDCYWGDVTTAYNS TTPRNRMRQEKQIKDRFHKIKKNVGRFCCAYKEVKSIYVSGQNELQLMEKVHATYEAD YKEGQFTFLHCWKALRDQPKWHAYLEELEKPNKTKSDNEVEVRELTSTPNSPEDIIRP EGTKAAKARRNGKDKRKRKAKVYLSDMDDEIDKPKEVQNMADKGRDELLETQRRVSSE NLESKRLAHLAAMEHKEAVMLETYRALMLQDTKDMPDDVRFEHVMALKSMREKLFPKT KVSKMLILAACFGSASAREATYYIIFSNPPILSKQNLCSNYLLSMSLYGSLLWPMNDV WIIVID</aaseq>

Gene Sequence

<dnaseqindica>4117..4308#1234..2028#872..1142#30..316#ctaatcacccaacacaatcttgccataccatgggtcgatcgaaacgggaagttgccccgccacctcaagctttgccggcatccttcccatctggcatgtggctggctactccgccgatgcaggcctcctttgctcccggtggctggcaaggtacagcggctgcacctggtggctggcaaggtatggcgccaccgcagccgccgcaggctccattatttgcatacggcgccaatacttctgctccccatctggcccagatgaagcaagggtcagatcgtagttccatggacgattccttgtcagatctgcaagaaaggtaagctttcgattttgtttgatgttgcattgatttgttcgacaagcaaagagcacctctgcgcttactgttttttttttttgttgttgcttcgatcttgattagcaaattaaacatgttgactaattaagcttgattcttgccgtgttgtagttttccccttaggatctgaccatctgtgaacaacttattaaaattatttcctgctaatgtgtcaatggactcatggtgtagatctgttgcttacttggtcatactgaagtgactaagtagtcttgatcagctagcaatttttttaatactcttgttgtaagcaactacaaaatacatgtggattaatttatatagcaagaactactgctacatatatagtatagtgccttatcaaattttattgcacttatgcacagacaccctgtgaccaaccaataactatttctatacataggttagtgactaatgaaattaactaatctacatatacatggagaatattcttacgttactccataggttaggaatatttttaaatttgtatctttgcctattttgcagtggtatggactcacgtccacctggtggattcttaagttactttcaggatccatcaagtttacagaatcatcaaccttctataccactaaattattatgctactcagcaagcagcaccatgggcaccttcacctgcagaataccgaagtccagttacaaaatcaggtccaggagaacaacaccctatcaacattgatagtggtggtgaagaaacccccactgttaggactgagaagcggttgacatggacacatgaagaggacataaggctagtaagtaaataaggaggatcaatcatgtattctcattgagtcattatcttgtttgtagtttaggactaatcttattttgttttgactataggtgagtgcttggttgaacaacttgaatgattcgatcaatggtaatttcaagaaaaatgattgttattggggagatgttacaactgcctacaatagcaccactccgagaaataggatgaggcaagaaaaacaaatcaaggaccgctttcataaaattaagaaaaatgttggccgtttttgctgtgcttataaggaggtgaaatctatctatgttagtggacaaaatgaactacaattgatggagaaggtccatgcaacatatgaagcagattacaaggaaggccaatttacatttctgcattgttggaaagctctccgtgaccaaccaaagtggcatgcttacttggaggaacttgagaagccaaacaaaacaaagtcagataatgaagtggaagtaagggaacttacatccactcctaatagccctgaagatattatacgtcctgaaggaaccaaagctgctaaggcgcggcgtaatggtaaagacaaacgcaaaaggaaggcaaaggtttatctatcggatatggatgatgagattgacaagcctaaagaagttcagaacatggcagataaaggtcgcgatgagctactggagactcagaggcgtgtttctagtgagaatcttgaatcaaaaaggttagctcacctggcagccatggagcacaaggaggcggttatgttggaaacatatcgggctctcatgttgcaagatacaaaagatatgcctgatgatgtcagatttgagcatgtgatggcattgaagagtatgagggaaaagttgtttcctaaaactaaggtactgtcacattccattctctaattaaagcatgctatatttttttctacttgctgaaatttactccctgcaaattttatgtatgtttttagcacaattgaaatagttgcaaatagtcatgtaaataggcttgcaatcaagtcaacagttgcaaaaaaaaatacagtcaagtcaacagtttgcaaataagcatgcagtcatgcagtcccaatgttcaattaatagtataaataggcttgcaatcaagtcaacagtttgcaaataagcatgcagtcccaatgttcaattaatagtaattcaaataaacatgcagtcaagccatatgcattcccaataatagttcagttattacttatccaaataaaactgtagtcagcatgtcaactcagaaactttagcccatatatatctacctatatgtatatatattggtctaatggtgctaactatccatccctctcaaattctttcaccacttctttcccatcctttcaccacttctttccaccatgtctcctgatggctctggtgaactagacccttccaaaattatagaacagtatattgctgagcagggcatcatagattcttttgctagaaggatcatggcaaagatcaagaccaagctcagaattagaaaattaagtaagaagagtgttacaaggaagacaatcaagagggatcacgctgatgcacaccatcgtctcgtatctgactacttcagtgaagaccctctctacccagagagaatgtttcgtacaagatttcagatgggaagaccccttttttctacacattgtgagttcccttggtaggtggtctccttgcttcacacaaagggtagattgtagtggtcgccaagggctctcacctctgcagaagtgcacagctgcaatacgtatgctagcatacggtagccctgctgatagcctagatgagtaccttaagattggcaagagcacgtccctgcagtgcttggacatgtttgcacgaggagtgattgaggtctttggcccagagtttttgcaacgccctacatgtgaggatgtggagcgtttacttcaagttggtgagtctagaggcttccctgggatgttaggtagtatcgactgcatgcattggaggtgggaaaaatgcccgacggcatggagtgggcagtttactcgcggtgactatggagtaccaacaattatcctcgaagctgttgcttcttatgacctccgcatatggcatgctttctttggtgtcgctggatcaaacaatgacatcaatgtattgaatcaatccccactgtttcttgatgtgctaaaaggggatgctcctcaagtaaagttttctgtgaatgggaatgagtatagcacaggttactatcttgctaatggaatatatccagaatgggctgcctttgtgaagtctattcatcttccacaaacagagaagcacaagttatatgcacaatatcaagaaggagcaaggaaagatgtggagtgtgcatttggggtcttgcagtctcgtttcaatattgtgcgtcgtccagcaaggtcatggaaacggaagagtgttgggagaatcatgaaagcgtgtgttattctccataatatgatagttgaagatgagagggagggggttatcattcctattgatctgaatgagaaccttggagcatcaattgttctgcctcctgaagtaactactggtgatagtccatgcttttttgatgtgttgcgcaggaaggctgaaatacgtgctcgtgcaccacattcccaagtaaaaaaagacttagtcgaacacatttggcaaaagtttggtagtacccgtcgcatttagttatggtaggatattaagcatcctgttttcacattttccattacaatattgagcatcttcccttattagttaatttattcatttatttcaaggacatggtaaactttggtgctttctgctatggttctgagaggtatgcacctgctttgtatagtatagcttccttctagctgcatcttagttgttttacttccagtttatgtgctgcaatttttatataataatcatgctcctgttttttatgaacaattcatgacgcaggtatcgaagatgctcattttggctgcttgttttggcagtgcttcagcaagagaagctacttattacataattttcagtaatccaccgattttatcaaaacagaacttgtgttctaactatctactcagtatgtcgttgtatgggtcactgttatggcctatgaatgatgtatggatcattgtaatagactaagttcttttgtcagtctatgaactaattagtagttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0282700, RefSeq:Os11g0282700