BGIOSGA001352

From RiceWiki
Revision as of 10:19, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001352| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001352, complete gene.| tag = OsI_025...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001352

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001352, complete gene.

LocusTag

OsI_02555

Ensembl Transcript ID

BGIOSGA001352-TA

Ensembl Protein ID

BGIOSGA001352-PA

Length

2701

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24894013..24896713

Sequence Coding Region

24896668..24896713,24896118..24896236,24895871..24895953,24895205..24895326,24894742..24894906
,24894520..24894613,24894156..24894330,24894013..24894036

Genome Context

<gbrowseImage1> name=IndicaChromosome01:24894013..24896713 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:24894013..24896713 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGCCGCTCTCCTCCTCTTCCCAGGATTCATCGGTTCCCTCTGCTCAGGAAGAAAGGGTAGTGGTAACGAATAAACATGGAGAGAAACTCATTGGGTTGCTGCAGCACATGGGTTCCAACAAGATTGTAGTGATCTGCCATGGTTTTACAGCTTCCAAGAATGATAGCATCATTGTTGATCTAGCGAATGCACTTACCAAGAAAGGGGTTGGAATCTTCCGCTTTGATTTCAGTGGAAATGGAGAAAGTGAAGGGGAATTCCAGTACGGGAACTATAGAAAGGAGGCTGATGACTTGCATTCTGTTATTTCACATCTTAATCAGGAGAAATATGATGTGAAAGCAATTGTTGGTCACAGCAAAGGAGGAGATGTGGTGGTTCTGTATGCCTCTATCTATGACGATGTGCGCACAGTGGTTAATCTCTCTGGTCGATTTCATTTGGAGAAAGGCATTGAAGAACGGCTAGGCAAAGAGTTTATGAATATAATTGACAAAGAGGGTTACATTGATGTCAAAACCAACTCAGGAAAGGTTTTATATAAGGTAACAAAAGAGAGTTTGATGGAACGATTGACCACTGATATGCATAAAGCATGCCTTTCCATCAGCAAAGAATGCAGGTTTTTCACAGTTCACGGTTCAGCCGATGAGATCATTCCTGTGGAAGATGCGTACGAATTCGCGAAGCATATACCGAACCACAAGCTACATGTCATCGAGGGAGCAAATCACTGCTACACTGCTCACCGTAAAGAGCTTTCTGATGCCGTGGTGGATTTCATTACATCCAGTGAGGATGGGGATAACTCGTCGGCATAA</cdnaseq>

Protein Sequence

<aaseq>MAEPLSSSSQDSSVPSAQEERVVVTNKHGEKLIGLLQHMGSNKIVVICHGFTASKNDSIIVDLANALTKKGVGIFRFDFSGNGESEGEFQYGNYRKEADDLHSVISHLNQEKYDVKAIVGHSKGGDVVVLYASIYDDVRTVVNLSGRFHLEKGIEERLGKEFMNIIDKEGYIDVKTNSGKVLYKVTKESLMERLTTDMHKACLSISKECRFFTVHGSADEIIPVEDAYEFAKHIPNHKLHVIEGANHCYTAHRKELSDAVVDFITSSEDGDNSSA</aaseq>

Gene Sequence

<dnaseqindica>1..46#478..596#761..843#1388..1509#1808..1972#2101..2194#2384..2558#2678..2701#ATGGCGGAGCCGCTCTCCTCCTCTTCCCAGGATTCATCGGTTCCCTGTGAGTCCCCTTTACTTGATTTTTCTTTTTTTTTAACCTCCCGGATTCATCCTCTTTACTTGAACGTGGATTGTTTAGATTGCTAGCTGACGGACAAGAGAGCGTTCTTTTTGTGTGTATATGATTTAATGATGTTTTGGCTAACGAAAAGGAGAAGAAGATATGTTACTCCAATATAATAATTAAGGGCCTCGTTGTTTTCACTTATGCTTATGCGAATTGCTTATTAGCAATTCAAGAATAATTTGTGAGTAATACTTTTATATGCGTGTCTTTAGCGATTCAAAAGCAAATGCTGTAAAATAAACTACGATGAAGAAAACCACGATATCAACTCCAAAATTAAGTTTTAAAATTTAAAATTTTGGCTTATATGCATAAGCATAAGCAAAACAATGGGGCTCTAACTCTATTATATGGTTTCTAAACAGCTGCTCAGGAAGAAAGGGTAGTGGTAACGAATAAACATGGAGAGAAACTCATTGGGTTGCTGCAGCACATGGGTTCCAACAAGATTGTAGTGATCTGCCATGGTTTTACAGCTTCCAAGGTGCATAAATATATCGTTACATAAGAAATTCCCTTTGTACTATTCAAAATATGTGGGTCACTAATTTTTTTTCTTGAGTTTTGTCTGAGAAGCAACAAGTTTTCTAATTTTTAGTTCTTTTTTACCAACGTAATGAAGCTTGACTCTTGGTCTCTTGTTTTCAGAATGATAGCATCATTGTTGATCTAGCGAATGCACTTACCAAGAAAGGGGTTGGAATCTTCCGCTTTGATTTCAGTGGAAATGGGTAGGTTGCTCATGGAGCTAGATAATATATATGAATATGATGCTGATTTAAATTCACAAAAGCTAGTGTTGTAAATGCTATTCTATCCTCTGTTAATTAATTTCACTGGTTGCATTCAATTTTATCCTTTTCTGGAGTTCTTTTCAGGAATATGCATAAGACTTCCGTAACTTTGTATTGAGATTTCAAGTAGAGCTTTGTTTTCACATCAGCTAAACTAGTGAAAAAGGGTAAAAAAAAAAAAGAATAACAGCAATTGAAGGCTACATTTCACGGTTGGTTGTGTGGGTGGAAGACCAAAGGGTAGGCCATCAGATTGGCACTCCTGCTGTGCGCCAGTGGGCTGCCTCTTCAGCAGCCGTGGCAGCCACTTCCCTTTTCTAGAGGTTTGGTTAGAAGTTAGAGCTAATTAGCTAAATGAGCTGAGGTTCCTATCTGTTGTTCCTTTGAATTTTAGATGTTACTTGTCTTTCAGATCTACACTTTCTTTTCCCCTGAAGGCATCAATGCATGATTTATAAGCCTTTCACTATACAATTTTCAGAGAAAGTGAAGGGGAATTCCAGTACGGGAACTATAGAAAGGAGGCTGATGACTTGCATTCTGTTATTTCACATCTTAATCAGGAGAAATATGATGTGAAAGCAATTGTTGGTCACAGCAAAGGTTCGTGGTATTATACCCTTGTTTCATATACAATCTATGCAGGAGTTAAAATGGTGGAGAACTTCGTGGCTGAATATTTTTCTATCACATTGACTGTAACATCAAAACAATCTACTGCTAGAAAATACTATAAAGTTTCTAAATGGTTAGCATAGCACTTTTTCTGGATTTTTTTAATTTACTCTCATGTCTCACATTCGCATCCCTTGATCATTGAATTTTGCCATGCCTTGTTGCAAGTTCTACACTTGGTAATCTTAAAAATCCAGTCACTGAATCTAACATTCCTTATCTCCAGGAGGAGATGTGGTGGTTCTGTATGCCTCTATCTATGACGATGTGCGCACAGTGGTTAATCTCTCTGGTCGATTTCATTTGGAGAAAGGCATTGAAGAACGGCTAGGCAAAGAGTTTATGAATATAATTGACAAAGAGGGTTACATTGATGTCAAAACCAACTCAGGTAAGGAAGTTCCTATCAGTTATTGTGACCTTTACCTGCAAAGATACTTTATAGATAAATCATATACACTGTGTATGCTTACTTCTCTTTCACGCGCATTAGTTGACTGTCCGTCATTTCCAATGTAGGAAAGGTTTTATATAAGGTAACAAAAGAGAGTTTGATGGAACGATTGACCACTGATATGCATAAAGCATGCCTTTCCATCAGCAAAGAATGCAGGTCAGGAAGCTAACTCAACCGCTTTTACCCCTATATTCAAATAAACAGCAGTATAAGCGCTTAACATAGCTGAACATGCTATTATCTTGCATTCCCACAGATGAAATATTGAATGCATATCTCTTATGTTTTGGACAGAGGTTTCCAGTTGTGCCAGATTTTGAGGCAACTTTATTTGTCTTTGTTCAGGTTTTTCACAGTTCACGGTTCAGCCGATGAGATCATTCCTGTGGAAGATGCGTACGAATTCGCGAAGCATATACCGAACCACAAGCTACATGTCATCGAGGGAGCAAATCACTGCTACACTGCTCACCGTAAAGAGCTTTCTGATGCCGTGGTGGATTTCATTACATCCAGTGAGGTATAATGCAGAGAAAGCAATTTATTCACCTGTTGTTCTTTGTAGGCACTGTCTCTTGCAGTCTGTTTCGACAGTGTGTTCATACGACTGACCCTGGGAGTTGCTATTTTTGTCTGCAGGATGGGGATAACTCGTCGGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001352