BGIOSGA001365

From RiceWiki
Revision as of 10:20, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001365| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001365, complete gene.| tag = B1151A1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001365

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001365, complete gene.

LocusTag

B1151A10.27

Ensembl Transcript ID

BGIOSGA001365-TA

Ensembl Protein ID

BGIOSGA001365-PA

Length

2588

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24440285..24442872

Sequence Coding Region

24442655..24442872,24442358..24442423,24441789..24441864,24441623..24441678,24441442..24441526
,24441240..24441300,24441081..24441133,24440920..24440990,24440742..24440814
,24440551..24440655,24440285..24440446

Genome Context

<gbrowseImage1> name=IndicaChromosome01:24440285..24442872 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:24440285..24442872 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGATGGCGGCGGCCTCCCTCCTGTGCGCGAGGGCGGCGGCGGCGGCGCCCACGCTGCGCCTACGCGGCGGAGGCAGGGGAGCACGCCTCGTCTTCTCCTGCTCCGCCTCCTCGTCGTCGCCGTCCGGGGAAGGAGGGTTCAGTGGGAAGGTGGGGTTCCTCGGCCTCGGGATCATGGGCGCACCCATGGCCTCCAACCTCATCAACGCCGGGTGCGATGTCACGGTGTGGAACAGGACCAGGAGCAAGTGCGACCCGCTCCTCAGCCTCGGCGCCAAGTACGAGCCTTCACCGGCCGATGTTGCTTCGTCTTGCGATGTGACCTTCGCGATGCTTGCTGATCCGGAGAGCGCGGTTGAGGTTGCATGCGGGGCCAATGGAGCTGCACAGGGGATGGCCCCAGGGAAAGGGTATGTGGATGTGTCGACGGTTGATGCTGCTACATCCAAGCTGATTGGCAAGCACATTACAAGTACTGGGGCATCTTTCCTTGAGGCTCCAGTTTCAGGCTCAAAAAAGCCAGCAGAAGATGGGCTGCTCATCTTTCTTACCGCAGGTGATGAGTCCTTGTACAATAGAGTGGCATCCCTCCTTGATGTTATGGGCAAGTCAAGATTTTTCCTCGGTGACGTTGGCAAAGGTGCAGACATGAAGCTCGTTGTTAATATGGTCATGGGGAGCATGATGGTTTCGTTTTCAGAAGGACTGCTCCTGAGCGAAAAAGTTGGCCTAGACCCCAATACTCTTGTCGAGGTTATTTCACAAGGTGCTATCAGTGCTCCCATGTTCTCCCTCAAGGGCCCTTCCATGGTTAAAGCTGCATACCCTACTGCTTTTCCTCTGAAGCATCAGCAGAAGGATTTGAGGCTCGCATTGGCCCTGGCAGAATCGGTGTCCCAGTCTATTCCTACAGTCGCAGCTGCAAACGAGCTGTACAAGGTCGCGAAATCGCTTGGGCTTGCAGACCAGGACTTCTCTGCTGTAATCGAGGCGCTGAAGGCAAAGGAGCAGAGCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAMAAASLLCARAAAAAPTLRLRGGGRGARLVFSCSASSSSPSGEGGFSGKVGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFAMLADPESAVEVACGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLEAPVSGSKKPAEDGLLIFLTAGDESLYNRVASLLDVMGKSRFFLGDVGKGADMKLVVNMVMGSMMVSFSEGLLLSEKVGLDPNTLVEVISQGAISAPMFSLKGPSMVKAAYPTAFPLKHQQKDLRLALALAESVSQSIPTVAAANELYKVAKSLGLADQDFSAVIEALKAKEQSK</aaseq>

Gene Sequence

<dnaseqindica>1..218#450..515#1009..1084#1195..1250#1347..1431#1573..1633#1740..1792#1883..1953#2059..2131#2218..2322#2427..2588#ATGGCGGCGATGGCGGCGGCCTCCCTCCTGTGCGCGAGGGCGGCGGCGGCGGCGCCCACGCTGCGCCTACGCGGCGGAGGCAGGGGAGCACGCCTCGTCTTCTCCTGCTCCGCCTCCTCGTCGTCGCCGTCCGGGGAAGGAGGGTTCAGTGGGAAGGTGGGGTTCCTCGGCCTCGGGATCATGGGCGCACCCATGGCCTCCAACCTCATCAACGCCGGGTAAACTAATCCGCAACTGCTCTCCTCCTTCCTTTTGCACTCTGCTCTTGGTACTAGTAGCTGTTACTACTGTTCTACATATCTTTTTCTCTCTCCTGTGGAATTCGTCTCGAGCCTAGTTCGTCAGCTTCTGCTTGTACGGTTTCGATGGTGTTCATGGCTGCTGCTGCTGCTTCTGCTTCTGCTGATGCTTCTACAGTTGTGTGCTTGTTTTGTCTCCTCTTGCTGCAGGTGCGATGTCACGGTGTGGAACAGGACCAGGAGCAAGTGCGACCCGCTCCTCAGCCTCGGCGCCAAGTATGCCATCCCCACCCGTTGCATTTCCATTCCCATTTCCATTTCCATTTCCATTTCCATTTCCCCTTATGAATCAACAATCTAGCTGGCTAGCTAGCTTTGCTTGCTTGCTTGTTGAATGGGTGAGGCAATAGTGTGCGCCATGATTAGGAATTCTGGAGCTGGACAGTGGACACTGCAATGCAATGCAGTGCAGCTCTGGATTGGTAGGCACAAACGGAGATTGTTCATAATTTGCTCTTCGTTTGTGATTCTTTACTTTCTTTTCGATGACATATGCTCTTTTCCTGAAATTCCACTCAGAAGTAATCCACTTGTAGAGCACAGAGGCTTTACAGCTATAACAAATTTGCTGTCATTACTGTTCATGCTGACCCAAACAGAGAGACAGGGAAAAGAAAAGAGAGAGAAAAAAAAAGACATAATTCTATTTGACAAAAAGATATGTACAGCACTTTGCTTGATACAAAGAGGATGCCTTGCCTGCCTACAGGTACGAGCCTTCACCGGCCGATGTTGCTTCGTCTTGCGATGTGACCTTCGCGATGCTTGCTGATCCGGAGAGCGCGGTATATGCCCTCGTTTCAGAAAATTCTTCAGTCTGCAATACTATTTCGTGTTCGTGAAAGCTCACATGGCAGATCTAATCATTCGTCTAACGGTTTGTACCTCCACTCAGGTTGAGGTTGCATGCGGGGCCAATGGAGCTGCACAGGGGATGGCCCCAGGGAAAGGGTAATCTTTGCTGTGAGAAGGCATCAGAAAGCCTGGAGCATCAAGAATGTGCTGGCCTAGATAGCATTATCTCTTATATCGTGTTTTCTGTCACAGGTATGTGGATGTGTCGACGGTTGATGCTGCTACATCCAAGCTGATTGGCAAGCACATTACAAGTACTGGGGCATCTTTCCTTGAGGTAGTTTCTGGTCCCTGCCACTGATCGTACCCTACTCGTCATGTGTTCAACTGTTGATTGTGTTGTCTCAATGTGTCGCTAGCGATGCGATTTCAGCTCTTGTACTGTTGGTCCAATGCTAACTCGATACCTTTTCAGTAGGCTCCAGTTTCAGGCTCAAAAAAGCCAGCAGAAGATGGGCTGCTCATCTTTCTTACCGCAGGTAAACTTCCACCTGACACCTCCAAGCTTTGTAATTGTGAGATTTCAGTGTGCAGCTGTCATGTTCCTTATTATGTTACCTGAAATGGTCCATACGTTTGTGTAAGGTGATGAGTCCTTGTACAATAGAGTGGCATCCCTCCTTGATGTTATGGGCAAGGTTAACTTCTTTTATCTACAATCAGTACTCCATTTAGGCCCTCATATTGAGCCAGGAAATGCACTTACGCTGTCCTTACTCTGAAATCAGTCAAGATTTTTCCTCGGTGACGTTGGCAAAGGTGCAGACATGAAGCTCGTTGTTAATATGGTCATGGGGAGGTACCAAAGAAGTCCTTCACATTCAATATTCTAGCAACCTTACTCCTGTAGTCTGTTGATACTTATTAATGAATGAGTTCTGATCTTCTTGGCAAAATACTGCAGCATGATGGTTTCGTTTTCAGAAGGACTGCTCCTGAGCGAAAAAGTTGGCCTAGACCCCAATACTCTTGTCGAGGTTAGTTAGCTCTTACAGTGCTTCAGTGGTAAATACCCAAGTACAGGAATCTAATCTAGGACACACCATACATTGATCCTTTACAGGTTATTTCACAAGGTGCTATCAGTGCTCCCATGTTCTCCCTCAAGGGCCCTTCCATGGTTAAAGCTGCATACCCTACTGCTTTTCCTCTGAAGCATCAGCAGAAGGTAGCCCCTACTTGCATGTTAATGTTGCCAGCACTAAAAACCAGCAACAATTGCATCTCGTCTGATTTCTGTGGCACTGCGAAAAACTGGATTTTTCATGGCAGGATTTGAGGCTCGCATTGGCCCTGGCAGAATCGGTGTCCCAGTCTATTCCTACAGTCGCAGCTGCAAACGAGCTGTACAAGGTCGCGAAATCGCTTGGGCTTGCAGACCAGGACTTCTCTGCTGTAATCGAGGCGCTGAAGGCAAAGGAGCAGAGCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001365