BGIOSGA001398

From RiceWiki
Revision as of 10:20, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001398| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001398, complete gene.| tag = OsI_024...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001398

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001398, complete gene.

LocusTag

OsI_02462

Ensembl Transcript ID

BGIOSGA001398-TA

Ensembl Protein ID

BGIOSGA001398-PA

Length

2235

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23876473..23878707

Sequence Coding Region

23878621..23878707,23877143..23877197,23876473..23876843

Genome Context

<gbrowseImage1> name=IndicaChromosome01:23876473..23878707 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:23876473..23878707 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCAGATCATGGGGAAAGTGGGCGGGTACTGGTTCAAGCAGAATGCCGGCAAGGAGATCAACAACATCGGCGACGATATCAATTCAATCTCTAGCAGCATTGGAGATGGTGCCAAATGGATGGTCAACAAGATCAAAGGGAAGATGCAGAAGCCATTGCCGGAGTTCCTCAAGGAGTACGACCTCCCAGTGGGCCTCTTCCCGCAGGACGCGACCAACTACGAGTTCAACGAGGAGACGAAGAAGCTGACGGTGTACATCTCGTCGGTCTGCGAGGTCGGCTACAAGGACTCCTCCGTGCTCCGCTTCTCCACCACGGTGACGGGCTACCTGGAGAATGGGAAGCTGTCGGAGGTCGAGGGCCTCAAGACCAAGATCCTCATCTGGACCAAGGTGACGGCCGTCAGGACCGAGGCCACCAAGGTGCACTTCGCCGCCGGCATGAACAAGGCCAGGAATCGCGACGCCTACGAGGTCGTCAGGGATGGCGTCGGCATAGACAAGTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MDQIMGKVGGYWFKQNAGKEINNIGDDINSISSSIGDGAKWMVNKIKGKMQKPLPEFLKEYDLPVGLFPQDATNYEFNEETKKLTVYISSVCEVGYKDSSVLRFSTTVTGYLENGKLSEVEGLKTKILIWTKVTAVRTEATKVHFAAGMNKARNRDAYEVVRDGVGIDKF</aaseq>

Gene Sequence

<dnaseqindica>1..87#1511..1565#1865..2235#ATGGATCAGATCATGGGGAAAGTGGGCGGGTACTGGTTCAAGCAGAATGCCGGCAAGGAGATCAACAACATCGGCGACGATATCAATGTCAGCAACCTTTCTATCCCTTTCGATCCTTTCTTTCGAATGCTTTTGTTTTCTCATCTGATTGGAGTCGTCGCATTGCACGATCGATAGTTCCCTCTTCTTAATCACGTTTTGTTCATTCTAACCTGGATCGTGGTCTCCTGTTATTGGTAATTTTTTGGGCTGTTCGATTTTTCCAAGGATAAATTTTTCGTTGGTTTGTTGCTGTTGTTGGATCTTACGAATTCACTTTGTCGATAGTCTCGCAGCCTGCCGAAGATTATCCTTACCGAAATTGTTACTTGAATTTAAACGAGATGATTGTTCTGGTAGAGAAAATTGATTTGATCATGAATCTATTACAGAACGTGCTGCACACATATCGTAAGGTGGCTTTTGTAATGATATATGGATTCGGTGAAATTATACATTAACATTATACATTGGGAAAACTTGATTTGCTTGAAGCCACATCCATCTAGAGTGAAAATGATCAACTGATATAAAGTTTCATAAAGAGACTGGAGGCTATTTATACGTGATAATTTAGGTGCCATTAGTTGCACAATGATTTTCAGGAGGTAGTACATTTAGGTGCTGATAGTTGTGGGGATATAGTGTAGTTAAGGAAGGAGAAAGTGCAGTGCTACAACAGGGAGGTGAATATGACAACGTTGGCTGAGGTTGGGGGATTGGTGACTTGGTAGTTGAACAGCAATTAGGGCCATGTATTTTTCTGTATTGACAATCAGGATTGTGAGATGGTCTTGTGCATGTGGACATTGACCATGAATTTGTAACAGCAGGATATTGCAAAAATGGGTATCTTTTAGACATTCATGCTGCATTATATGATGTGATTGTAATGCTTCCAACTTCCAAGTAATAGAACATTTTCTTTTGAGTAAAGTGTACGGGCGGTCCCTAAACTTGTGTGGGTGTGCCAACTAGGTCCCTGAACTCTCAAAATGAATTTTTGGGTCCCTCAACTTGTCTCGGGTGTCATGTAGGTCCAAACGGGTTTCAACCTACTCCGTGTGCTGACGTGGCATGTCATGGTAGCGCCTACGTGTCAGTAGAACTCATATGTCAGCCACATATAGAAAAAGTTAAGAACATATTTTTTCTCATGTCTTTTTCCATTTATTTTTTCAAAATTAAAAACATCATTTTCTCCTCTCTTTTTAAATTTTATTTTTTTATACATGATTGACATGTGGATCGCACTAACACGTAAGCGTCACTGTGGCATGCCACGTCATCTCACGGAGTGGGCTGGAGCCCGTTTGGACCTATATGACACACATGACAAGTTTGGGGACCTAAAAATGCATTTTGAGAGTTTAGGGACCTAGATGACATATTTGTACAAGTTTAAGGACCGCTCGTGCACTTCACTCTTTTCTTTTTGTAGCTTGTGTTCTGACTATATGCAAAATTTCAGTCAATCTCTAGCAGCATTGGAGATGGTGCCAAATGGATGGTCAACAAGATCAAAGGTAAGGAGACATCTTTATATTGGCCATGCCGGCCGGTAATAGTAGTACAAACTTTAAGTACTTTGTGTTCTCCATAAACACATGTACATTTTAAATGTGCAGAGAGCAAATATTCCACTCTGAACCGTTATTTTCTAGTGGCAATGTAATCTGCATAGGAGCAAGCCGTTTCTTCTGAATTTTCAAGTTCCAAACTGCATGTCTTCATGAACATTGGCATATCAATTTAGTAAAAGCAAAAAAAATTCAACCATCGTTTTTTCACACTAATGTCAGCAAAAACACCTCACTGTGTTCAGGGAAGATGCAGAAGCCATTGCCGGAGTTCCTCAAGGAGTACGACCTCCCAGTGGGCCTCTTCCCGCAGGACGCGACCAACTACGAGTTCAACGAGGAGACGAAGAAGCTGACGGTGTACATCTCGTCGGTCTGCGAGGTCGGCTACAAGGACTCCTCCGTGCTCCGCTTCTCCACCACGGTGACGGGCTACCTGGAGAATGGGAAGCTGTCGGAGGTCGAGGGCCTCAAGACCAAGATCCTCATCTGGACCAAGGTGACGGCCGTCAGGACCGAGGCCACCAAGGTGCACTTCGCCGCCGGCATGAACAAGGCCAGGAATCGCGACGCCTACGAGGTCGTCAGGGATGGCGTCGGCATAGACAAGTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001398