BGIOSGA001422

From RiceWiki
Revision as of 10:20, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001422| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001422, complete gene.| tag = OS01G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001422

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001422, complete gene.

LocusTag

OS01G0557500

Ensembl Transcript ID

BGIOSGA001422-TA

Ensembl Protein ID

BGIOSGA001422-PA

Length

4621

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23347944..23352564

Sequence Coding Region

23352325..23352564,23350519..23350586,23350388..23350416,23349277..23349947,23349109..23349162
,23348898..23349014,23348666..23348756,23347944..23347960

Genome Context

<gbrowseImage1> name=IndicaChromosome01:23347944..23352564 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:23347944..23352564 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGGGGCGGAAGCTGGCGGCGCGGCACCCGCACGGGCGGAGCAGGACGGCGCACAACATGTCGTCGTCGTCGCTGCGGAAGAAGTCGGACGCCGCGCTGGTGCGGAAGGTCCCCGTGGCGCCGCTCCGCCCGCTGCTCGCCAACCTCCAGGAGGTCTTCCTCGCCACCAAGCTCGCCGTCCTCTTCCCCGCCGTCCCGCTCGCCATCGCCGCCCAGTGCTTCCGCTTCGACCAGGTGTGGGTGTTCGCTCTTAGTTTACTGGGCCTCATCCCTCTCGCCGAGAGAGTCAGCTTCCTCACAGAGCAGATTGCACTCTACACCGGTCCCACCGTGGGCGGGCTGCTGAACGCGACGTGCGGGAACGCGACGGAGCTGATCATCGCGCTGTTCGCGCTGCTCAAGGGGAAGATCGAGGTGGTCAAGTGCTCCCTGCTGGGCTCCGTCCTCTCCAACCTCCTCCTCGTCCTCGGCACCTCCCTCTTCTGCGGCGGCGTCGTCAACCTCGGCGCCCGCCAGCCCTACGACCGCAACCAGTCCGACGTCAGCACCGCCCTCCTCTTCCTCGCCGTCCTCTGCCACTCCGCCCCGCTCCTCCTCCGCTACGCCGTCGCCGCTGGCGAGCACTCCGTCTCCGCCACCTCGGCCGCGGCGTCCCTCGACCTCTCCCGCGCCTGCAGCTTCGTCATGCTGGCGTCCTACGTCGCCTACCTCTTCTTCCAGCTCAAGACGCACCGCCAGCTGTTCGAGCCGCAGGAGGTGGACGGCGGCGACGCCGGGGACGACGACGAGGAGCCGGCGCTCGGGTTCGCCAGCGCGCTCTTCTGGCTCGCCCTCATGACCGCCGTCATCTCCGTCCTCTCCGAGTACGTCGTCGGCACCATCGAGCCCACCTCGCAGTCATGGGGCCTCTCCGTCAGCTTCATCAGCATCATCCTCCTCCCCATCGTCGGCAACGCCGCCGAGCACGCCGGCGCCATCATCTTCGCGCTCAAGAACAAGCTGGACATCACTCTTGGGGTAGCTCTGGGATCGGCCACCCAGATATCCATGTTCGTGGTGCCACTGAGTGTGCTCGTGGCCTGGATCATGGGGGTCCAAATGGATCTTGACTTCAAGCTGCTAGAGACCGGCTCTCTGTTCATGGCGGTGCTGGTGACGGCCTTCACCCTGCAGGATGGAACATCACATTACCTGAAGGGGATTCTCCTCCTCCTGTGCTACATTGTCATCGGCGCATGTTTTTTCGTTGCAAGACAACCTGCAGATCAAGATGTCTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MEAGRKLAARHPHGRSRTAHNMSSSSLRKKSDAALVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLFCGGVVNLGARQPYDRNQSDVSTALLFLAVLCHSAPLLLRYAVAAGEHSVSATSAAASLDLSRACSFVMLASYVAYLFFQLKTHRQLFEPQEVDGGDAGDDDEEPALGFASALFWLALMTAVISVLSEYVVGTIEPTSQSWGLSVSFISIILLPIVGNAAEHAGAIIFALKNKLDITLGVALGSATQISMFVVPLSVLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFFVARQPADQDVS</aaseq>

Gene Sequence

<dnaseqindica>1..240#1979..2046#2149..2177#2618..3288#3403..3456#3551..3667#3809..3899#4605..4621#ATGGAGGCGGGGCGGAAGCTGGCGGCGCGGCACCCGCACGGGCGGAGCAGGACGGCGCACAACATGTCGTCGTCGTCGCTGCGGAAGAAGTCGGACGCCGCGCTGGTGCGGAAGGTCCCCGTGGCGCCGCTCCGCCCGCTGCTCGCCAACCTCCAGGAGGTCTTCCTCGCCACCAAGCTCGCCGTCCTCTTCCCCGCCGTCCCGCTCGCCATCGCCGCCCAGTGCTTCCGCTTCGACCAGGTTAATTCAATTCCCCATTCCATTCCATTCCATGTTCGCTTTGACCATCCTCTTGTCTGCTTGGTGTTCGTTGCATCTTTTTTTTTTTCATCTTTTTTTTTTCGAGTTCGGCGTTTGCAAGCGGCGGTGACCAGGTGGCAGGCCGCTGCGGCGCCTATTTTAAGTTTTTTTTTAACTAGTATAAACCGAGATATAGTACTGTAGCTTTTTGCTGGTAAGGCCACATGGGCAACTGCACGGCTGCACGAGGGCTGTGTCCTTGCACTCCTGTTTCTTTTCTCTCTCTCTCTCTCTTTGACACTTTTATTTATGGTGTAGGATTAATTTTCGTAACTGTAGTAGAATTAGCCATCAATGTCTAAAGTGGTACTAGTAACAGTGTTAAAAAGTATACATACAAAAAATGTTGTCTTGTACCACTAGTACTAGTGTTAAACTGGCCATGGACGTTCCGGTGGACTTCCTGATTCCACTTGAAAATTAGGCGCTGTTAGGCTAATAGGACATGGAAATTATTTCCCACTCACTAGAATACATCTTTAAATCATAACCATTCATTTTCGCTCTTTCATTTAATCCTAACCCTTCGTTCATTTCCAAATCTCAATCCCACCTCACATTTCTCATTATCTAAACACACCCTTAGTACATACATTTATGGCCTCTTTTAAAGAAGTCAATAAATTACAGAAATTTCTCATACATCAGTTCAATTTCCACAAAATTCCTAGGCTTGATGACGCAATAAGCATCCATGTCTGCCAGATGGCCCAGATGTAACCTGAAATACAGGCCTAGGAGTTAAAATGTGGAGCACTTCATTATTCAGTATTTTAATTTTCTGTTATGAACTGTTAGCTTGTGATTTCCTCCCTCCTCTGTGATAGTAGAATATTCCCCCGCAAAACATATTTTGTGGAGTAGTTTGTATTGCTTGCTGGTGGAGCCTATTAGCTTTGCCAGTTAGTTTGCCTCGTCGGGACACAAATATTCTGCCGTGGAGCCCTGAGCTTTGAAGAAAACCCATCTGTCTCCTTGCAGCAAAAACTGAACTTAATTTGTCATCTTGCAAATTGCACTCGATTCCTCTTTGATCCGCCAAATTAGCGGCGTCATGCCGTTTTGCTGCTTGCTGAGTAGACGACAGGATTCTGCCGGTACAAGCGGCTGGGACGATGACGAATCCAACCCATTTAATTCTTTGCCTCTTGGTTGAGTGTACTTCTACCCCAGAAAGTGATCAATCTCCGTTGTGTTTTGGAGCTTGGTGAATCAGGGGGTTTGATTGTGTGTTGTGCTAATAGATTTAGCTTGATTTTTAGTTTCGAAAGGAAAACAGATTTAGTTTGGTTTGGAGATAAGTTCACACTCTGCTGCATGCATCATGCATGGATGATGAGTGAAGCTGCTTCCAGTAAAGGTTGGAAGTGTTGGATTTTAGTGGTTGAGGCCAACAGTCTGTCACATTTCCTGATTAGTTGGAAGAGACATGTTTTATTCCTGATTAGTTGGAAGAGACATGTTTTATTCCTTCCACGTGGCATCTAATTATTTAATTGTGATGCAGGTATTTTTGCTGATCCAGTGCTAGTAAATTAGTGATAAAATAAAATAATGCGTTACCTTACAGTACTTTCCCTTTTTTTTTGTCGATATGTCTTCATCTTATACTTTTAACTACTATTGCACATTAATCCAATATGTGTTGACATTGGGAAACAAATATTTATCTTGACAGGTGTGGGTGTTCGCTCTTAGTTTACTGGGCCTCATCCCTCTCGCCGAGAGAGTCAGCTTCCTCACAGAGTAAGCTACTCGTTACAGAAGCAATTTTTATGTCCAGTTTTTAAAAATTCTGTTTATAATTCGAATGCTGAAATTTTGCATTTTGCTACTGAAATTTTGCAGGCAGATTGCACTCTACACCGGTCCCACCGGTAAGTCACAACGATCAGTCCCAAACTGAAAGTAATTTAAGACTTCATATTATTCGTGGATGGAATCATCTTTCTTAACATCAAAAAATGGCACTTGTTTCTCTATTCGTTGTAGCAAATGTTTTTTTAAAATTATAAAAGATCAGAGAAAAATGTCTCATATTTTGCTAGAGAAACCAAAAATAATTAATGCTACATTTGTCCACATGCAAAACGGATGGATCTATTAGCTCTTGATTAATTAAATATTAACTAAAACAAACTTAAAAGATGGATTAATACGATTTCTTAAATCAATTTTTTTCAAAATTTTTTCAGTTTGAAAAAAATGAGCACGGAGAAGAAAAAAATGAGCTACCAAACACAGCCTAAGCATTGTATATGAAGTAATTGAACTTGCTGTTGTGGTGTGTTGATGATGGTGTATGCATGGGGGGCAGTGGGCGGGCTGCTGAACGCGACGTGCGGGAACGCGACGGAGCTGATCATCGCGCTGTTCGCGCTGCTCAAGGGGAAGATCGAGGTGGTCAAGTGCTCCCTGCTGGGCTCCGTCCTCTCCAACCTCCTCCTCGTCCTCGGCACCTCCCTCTTCTGCGGCGGCGTCGTCAACCTCGGCGCCCGCCAGCCCTACGACCGCAACCAGTCCGACGTCAGCACCGCCCTCCTCTTCCTCGCCGTCCTCTGCCACTCCGCCCCGCTCCTCCTCCGCTACGCCGTCGCCGCTGGCGAGCACTCCGTCTCCGCCACCTCGGCCGCGGCGTCCCTCGACCTCTCCCGCGCCTGCAGCTTCGTCATGCTGGCGTCCTACGTCGCCTACCTCTTCTTCCAGCTCAAGACGCACCGCCAGCTGTTCGAGCCGCAGGAGGTGGACGGCGGCGACGCCGGGGACGACGACGAGGAGCCGGCGCTCGGGTTCGCCAGCGCGCTCTTCTGGCTCGCCCTCATGACCGCCGTCATCTCCGTCCTCTCCGAGTACGTCGTCGGCACCATCGAGCCCACCTCGCAGTCATGGGGCCTCTCCGTCAGCTTCATCAGCATCATCCTCCTCCCCATCGTCGGCAACGCCGCCGAGCACGCCGGCGCCATCATCTTCGCGCTCAAGAACAAGCTGGTAATTCAAACAAACAATGTGCATCCCATGCAAACGATCAGAGTCGTCTCTCCTGAAAACAAAATCAATGTTTAACTTGCTAATTAATGTAACATAATCTGGTGTTTGATTCAGGACATCACTCTTGGGGTAGCTCTGGGATCGGCCACCCAGATATCCATGTTCGTGGTGAGTGCTGCTGCTTAACTTACCCAGTACAGATCCTGTAGTTGTTCTGCTCTCATCCGGTTGAACGGATTGCCAAATCATGATGGGGTTGCAGGTGCCACTGAGTGTGCTCGTGGCCTGGATCATGGGGGTCCAAATGGATCTTGACTTCAAGCTGCTAGAGACCGGCTCTCTGTTCATGGCGGTGCTGGTGACGGCCTTCACCCTGCAGGTACACTGTGACTCATGCATTTTTACTTTGAACAGGTGGAAATGGAATTTAGTCACCGAAAATTACTCAGATAACAGGATAACATCTTAAGTGACATGTTGCAATTCAATGTGTCAACTAATTAATGGGCTTGATTTACAGGATGGAACATCACATTACCTGAAGGGGATTCTCCTCCTCCTGTGCTACATTGTCATCGGCGCATGTTTTTTCGTTGCAAGACAACCTGCAGGTATGTTTGCCTTTGTAAAAAAATAGCATGTTTTTGCACTTGATTGTAAGTCGTATTCACAATAATCCTTCGCATGATAGGCCATGCAAACAGCAATGGAGCCTTGCTGGATGTACCAACCGGTTCCATGAGTGTTCAGGCCGCATGATGGGTAAGCTAGCATAATCTTGTTCTAGCTAATACAAAGACATGTGATCATTTAATATAGAACATTGATCTTTAATTTTGAAGAAAATGATAGAAGATGACTTAAAAAAAATCAATACGTATGTATAGCTTCTGGTACTGCCGTATCTCTCTATGTGGACTACCATATATTTGTCATGATTTCCAGCATCTGGTGTGACAGAGTAGCTAATTTGTCGGACTCTTGGAATGCTTAAGTATGCCCGCATGTGTCTGAACAAGTCATCAAATAATAGCATGTAGTCCTGACAGGATGCACACCAATCCCTTTCATTGGTATTAAACTATATACTAACCTTTTGGAACAGAGTGTTTTTACTCTTGGAGAGCAGAGCTGTACTGTAGTGCAATAGTACTTAATTTAAGCTAACCACCTGTACTCTGCACAATTCTTAACTATGTCCAGTCAGTTATCTTCATATGAGAACATGGAGGTTTTTGTCCTTCAAATGAGCAAGACTATTAGTAATAAGATTTCCAGCTCCATAATGTGCATCTGATGCATGGGAAAAATTTCAGATCAAGATGTCTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001422