BGIOSGA001446

From RiceWiki
Revision as of 10:21, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001446| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001446, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001446

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001446, complete gene.

LocusTag

OSJNBA0042P21.15-1

Ensembl Transcript ID

BGIOSGA001446-TA

Ensembl Protein ID

BGIOSGA001446-PA

Length

6764

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22770693..22777456

Sequence Coding Region

22777227..22777456,22770693..22770714

Genome Context

<gbrowseImage1> name=IndicaChromosome01:22770693..22777456 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:22770693..22777456 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATAGGATAAATGTACACAGTATTTTGTGCATGTGGATTACAAACCAATTTGATACAAAGGCTGAAGCATTCAACATCCAAGGCAGCTATCTGAGTCTAACCAGTAGGGACGCTGAACATTTGCTTGACCTGCCATCACAAGGAGAAGAAATATTTGAACCACCAAAGACCAAGAATATGGACTTGTTTGATGAATTCAAGACAGCATCTAAGCAAGGGGCACATATAAAATTATCTTCTTTGCAATAG</cdnaseq>

Protein Sequence

<aaseq>MHRINVHSILCMWITNQFDTKAEAFNIQGSYLSLTSRDAEHLLDLPSQGEEIFEPPKTKNMDLFDEFKTASKQGAHIKLSSLQ</aaseq>

Gene Sequence

<dnaseqindica>1..230#6743..6764#ATGCATAGGATAAATGTACACAGTATTTTGTGCATGTGGATTACAAACCAATTTGATACAAAGGCTGAAGCATTCAACATCCAAGGCAGCTATCTGAGTCTAACCAGTAGGGACGCTGAACATTTGCTTGACCTGCCATCACAAGGAGAAGAAATATTTGAACCACCAAAGACCAAGAATATGGACTTGTTTGATGAATTCAAGACAGCATCTAAGCAAGGGGCACATATGTCACGCCCGGAATTTCTATCCAAAATCTCAAACGTTTACATGTGTGTTAAACCCTCGTCCAGGAATCAACCGAGGCACACAATGACAAATTAATAATAGAGTACAAATAAATAACTATTTAATACTCGCAAATAATAAAATATTACAGAGGTAGATAGTTCCTCTCAAGAAATAACATTCTACGCAGCGGAAAATAAAACTATGACAAACTATGGAACAGCTATGGCGACTCCACTCCACAGGCATCTTAACCAAGAACAAGCCTAATCCTCCAGATCATCACCTTCACTGAGATACTCCTCTTCTGATGAATGAATATTGCAAGAATGAGCATATGACATACTCAACAAGTCACACAGCAAATATGCAAGTGCACAGGATAACAAAGGATGGCATAATATAGCTCATTTGCAGAAACAGCATTTAATAAATATTTTAAGAGAATAGTAAAACAGTTGTATAATTAATCAATATTAAATAAACACCATACAACACACCCATGTTGCATAGGCCCAACCACATTTGAACAACCAACCCCAGTTGAACAAATTAAACCTCCAAACCAGGAATTATCCATTCCAAACCAGGAATTAAATTAATTACCACATTATTACCATTGATGAGTAGTGTGAGACTAATCACGAAAAACATTGCTCAACTCACCCATAACCGCTGGTACGGCTATTCGAATAGTTTAAACTCTGATCAGAGGTGTACCACTGTACCCACAAGACACAACCCCACATCATGTCACCATGTGCCTCAATACCACCACGGTACCTCGGAAAGGAGTTGTGACAATACCACTTGCACAACATAACCCATTACAGCGCACCTTTCCTGGATCATAATCACCCCCTTATAAACAAGGCATGGACTCCCCAGCGACCCCCATGGACTTCTCGCCACTTCTCAGTCTGGCGCACTATAATGAATCACGCTATACAAAAGATAAAGCCGTTGCCCACGCTGGCTTGTGGTTGGCACGATAAATGTTTCACAACAGTAGCTCGCGAACCGGTCCTTAATTGTCATGAGCACAACCATCAAAACCATATGCTCACAACCCACCTTAACCAGGTTTTAATTATCAATTAATTAACATCACACGATTAACCATCGTGAGCTACCATTGAATATAACCCTAATTAATAATAATAATTATAATTTATATTTAACCCCTTTAGTTAGCTAATGTTTCTAAGCATAGCTAAGCAAACTTACATATAGCATTTAGCCGAACCAATCCAATATATAAGGTTCACGCTAATCAAGTTATAACCCATAGGAAAATAAAGTCATCTTCGGCCATTAATTAATTGGGAAAGGTTCACCACCCGATGACATTCGAAAACAATGCATAGTTGAAATAAAATAATAGCTTTAAACGGGATCAATATGCTCAAAGGGTTGTTTGGGATCTGTGTGACTTGCCTTGGGCTTCCACAAACGCTTCGGAACCTTCCTCAACGGAAACGCTCTCCTCCGGAACGTCGGAAACTAAAGCAATTAAACAAAAATCAACAAAACAGTACAAAACAAGCATAAACAGTACATGTGGATATTTTTAACATGTAGATCTTGATTTTAGAAAAATTTAGCAACTTGAACCACCTGAAACAGATCTACGGTTATTTAGTTATGATTTTCCGAAGATTTAATCTATTAGAAAATTGGGAAAAAGGAAAACTGATGACGTCATGCTGACGTCATCAATGGAGGCCGGCTAGGGTTGGCGACCTCGCCGGAGCTAGGACGGTTGGCCGGGGCTTTGGAGGACATGTACACGTAGAGGACGACGAGACGAACCCAACGGTACTCACCACAACGTCTACCGATGACCGACGACGGCCGGCGACGAGAGGGCAACGGCGGCGGCTCGGCTTGCGTGGCGACGGCGAGCTACGGCGGCCGGCGACGAAGGGGGACGGGCGGCCGGGCTTCTCCACCCCTTGGCGCACCTCTTGGCGACGACGGCAAGCGACGGCAACGTCGGAGTCGGCGTCGTCGGAGCTCCGGTGTCCGGCGGCGAAGGGGAAGGGGCGGCCGGGCTTCCTCACCTCCGTGCGCACCTAACGTCGGCGACGGCAAGCGGCGGCGACGGCGGACGCGGCGGCGCGGTGACGCGAAGATCGGCCGCCGGCGTCGGCGGCTGCTAAAACGACGCGGCGCGGCGGCTAGGAGGCACGGGAGAGGTCGGGAAAAGGGGCAAACGAGAGAGGGCAACGAGGTGGTCCTATTTATAGCCTTGGATTGAAGAGATCGGACTCCAAACGAGAGGAATCGAAGCCGGAAACCAAAAACTCGGTTTTGGAGATAAACTCGAAAACGAGTTTGATTCGGGCAAGATACTCAACGAATTGCTCCGATTCTTGGGGGAAAAGATAGAGGAGAACGAGAGGATCAAAACCCCTCAAAAATCCGGAGGAAATGGGGTCGGATTGGAGCGGATTTGAGAGGAGAAGGGGGCGGCTCGGGCGGCTTGAGCCGGCCGGCTCGGGCACGGCTGGAGGTTAGGGATGGATTCGACATGTGGGGCCCACATGTCGGTCTCCCGAGAGGAGGGGGCGGCGGCGACGGTTTGGGCCGGCGTGGGCCGGCTTTGGCGCGCGCGGGGAGAGAGAGTATTGGGCCAAAATCGGCCCAATAACTTAAAGGAGGGGTTTTTGAACTTTTTAAATAAAATAATTTGTGAAATGTTGTTTCAATTATTAAAAATACTTCCCTTGCTCAAATAATTCCCAGAAAAATCTAGAAAATAGAGGACCCAGCATAGTATTTAATAAAATTTTATCTAGCTCACTTTTATGTTGAAAATTTTCCTAGAAAATTAGGGTTTAGCTTGTAGGCTTTTAAAATAATTTCTAAAAATGATTTAAAATATGCATTTTTAATTTAGTCGATTTTTAGGGCGCGACACATATAAAATTATCTTCTTTGCAATAGTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTGCAATTAACTGGACAAGCTTGACTTTAAACCACCTAATGAAAAGCATTAAAAAAAATTAATAAAAAAAGGAGTCAATCTTGAAGGAAACCTACCACTTTTGTAGGTAATGCAACTGCACAATTATTATTTTGTACCAACAAAAGACAAGTTGTTTTTACTCAATTGTACTTGTTGCAGTTATGGTACTGGGAGAAGCTACGAGCTGACAATTTGGATCCAACCATAGATTATACTATGCGCGACAAACCACTTATTCAATACTGGGACAAGCACAAGGCAAAAAAAAAGATAATACAATGGTAAAGGGAAGGTAATATACAATCATTTTATTCCCACTTAAGTCTAGCCTATTAATTCAAAATGTGAATTTACTTATGCTCCTGCTGCTGATGTCTTAGCTTGCTTGTGCTTTCCATTATATCATGCATGTAGTAGTTTGTCATCCTGAAGTAACAAGGAAGGGAACAGCATCAAATGGGCACACAGACGACTAGTCTCAGGAAGCTAACTTTTTTACCATCTACCAAAGCACTATTTTCGACCAGCTAACGTCAATGAGTTATTCTGTACTAGATTGTTGACGACATCACACTTGCTATAGAATGCTCCAAATCCTCACAAATCCGAAAAGATAAGGTAATCATTTTATTCATCTCTATGTACTTTGAATTATACATCACAACACATGGTTTAATATCCATTACATATATCCTTTCATCATAGAATGTCCAAGACATAACAAGAGACAGCGAAGAGAGCAAACAATCAGAATCATGTATCCCTACTGATAAGGTAATCAAATAATTGATCTGTACTTAAATTCAATTATACATCACTACGCAACGTTTAAAATCCATTAAATATGATATTTCATCGTAGGATGTCCAAGACGTAACAAATGACAGCGAGAAGAGCAAACAATCAGAATCATGCATCCATACTAATAAGTTAATCATTTCATTTAACTGTACTTACATTCAATTGTACATCACAACGCATGGTTTAATATCCATTAAATCTGTCATCTCATCATAGAATGTCCAAGACATAGCAAGTGACAGCGAGATAAAAACATCAGAACAACGCGTCGACAGCACAACACATGCCACTTCACACAAGGTAGTCAAAAAAACTAAAATTTTGTTACTTGATGTGACCATGGCTACTATAGATACAACCGTCGTCCACATCAAGATCAAGCCGTCCAAGTTCTACAATCCAGTTCGGCCACCTGCTACAGTGTCGACTTTAAACGGCCACCAAATATGCATGCGAGCTCCATTTTGGGACCATGAGTACTTGATGGAAAGCTCTCGGAGTCATCTTTCCAATGGATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATATTTTAAGAGAATAGTAAAACAGTTGTATAATTAATCAATATTAAATAAACACCATACAACACACCCATGTTGCATAGGCCCAACCACATTTGAACAACCAACCCCAGTTGAACAAATTAAACCTCCAAACCAGGAATTATCCATTCCAAACCAGGAATTAAATTAATTACCACATTATTACCATTGATGAGTAGTGTGAGACTAATCACGAAAAACATTGCTCAACTCACCCATAACCGCTGGTACGGCTATTCGAATAGTTTAAACTCTGATCAGAGGTGTACCACTGTACCCACAAGACACAACCCCACATCATGTCACCATGTGCCTCAATACCACCACGGTACCTCGGAAAGGAGTTGTGACAATACCACTTGCACAACATAACCCATTACAGCGCACCTTTCCTGGATCATAATCACCCCCTTATAAACAAGGCATGGACTCCCCAGCGACCCCCATGGACTTCTCGCCACTTCTCAGTCTGGCGCACTATAATGAATCACGCTATACAAAAGATAAAGCCGTTGCCCACGCTGGCTTGTGGTTGGCACGATAAATGTTTCACAACAGTAGCTCGCGAACCGGTCCTTAATTGTCATGAGCACAACCATCAAAACCATATGCTCACAACCCACCTTAACCAGGTTTTAATTATCAATTAATTAACATCACACGATTAACCATCGTGAGCTACCATTGAATATAACCCTAATTAATAATAATAATTATAATTTATATTTAACCCCTTTAGTTAGCTAATGTTTCTAAGCATAGCTAAGCAAACTTACATATAGCATTTAGCCGAACCAATCCAATATATAAGTTCACGCTAATCAAGTTATAACCCATAGGAAAATAAAGTCATCTTCGGCCATTAATTAATTGGGAAAGGTTCACCACCCGATGACATTCGAAAACAATGCATAGTTGAAATAAAATAATAGCTTTAAACGGGATCNATATGCTCAAAGGGTTGTTTGGGATCTGTGTGACTTGCCTTGGGCTTCCACAAACGCTTCGGAACCTTCCTCAACGGAAACGCTCTCCTCCGGAACGTCGGAAACTAAAGCAATTAAACAAAAATCAACAAAACAGTACAAAACAAGCATAAACAGTACATGTGGATATTTTTAACATGTAGATCTTGATTTTAGAAAAATTTAGCAACTTGAACCACCTGAAACAGATCTACGGTTATTTAGTTATGATTTTCCGAAGATTTAATCTATTAGAAAATTGGGAAAAAGGAAAACTGATGACGTCATGCTGACGTCATCAATGGAGGCCGGCTAGGGTTGGCGACCTCGCCGGAGCTAGGACGGTTGGCCGGGGCTTTGGAGGACATGTACACGTAGAGGACGACGAGACGAACCCAACGGTACTCACCACAACGTCTACCGATGACCGACGACGGCCGGCGACGAGAGGGCAACGGCGGCGGCTCGGCTTGCGTGGCGACGGCGAGCTACGGCGGCCGGCGACGAAGGGGGACGGGCGGCCGGGCTTCTCCACCCCTTGGCGCACCTCTTGGCGACGACGGCAAGCGACGGCAACGGCGGAGGCGGCGACGGCGGAGCTCCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTGAGAGGAGAAGGGGGCGGCTCGGGCGGCTTGAGCCGGCCGGCTCGGGCACGGCTGGAGGTTAGGGATGGATTCGACATGTGGGGCCCACATGTCGGTCTCCCGAGAGGAGGGGGCGGCGGCGACGGTTTGGGCCGGCGTGGGCCGGCTTTGGCGCGCGCGGGGAGAGAGAGTAGTTGGGCCAAAATCGGCCCAATAACTTAAAGGAGGGGTTTTTGAACTTTTTAAATAAAATAATTTGTGAAATGTTGTTTCAATTATTAAAAATACTTCCCTTGCTCAAATAATTCCCAGAAAAATCTAGAAAATAGAGGAGCAAGCATAGTATTTAATAAAATTTTATCTAGCTCACTTTTATGTTGAAAATTTTCCTAGAAAATTAGGGTTTAGCTTGTAGGCTTTTAAAATAATTTCTAAAAATGATTTAAAATATGCATTTTTAATTTAGTCGATTTTTAGGGCGTGACAACATATAAAATTATCTTCTTTGCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001446