BGIOSGA001457

From RiceWiki
Revision as of 10:21, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001457| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001457, complete gene.| tag = OsI_023...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001457

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001457, complete gene.

LocusTag

OsI_02342

Ensembl Transcript ID

BGIOSGA001457-TA

Ensembl Protein ID

BGIOSGA001457-PA

Length

2369

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22622209..22624577

Sequence Coding Region

22624350..22624577,22623472..22623540,22622209..22622616

Genome Context

<gbrowseImage1> name=IndicaChromosome01:22622209..22624577 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:22622209..22624577 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCGTGACAGCGGCTTCAACTTCTTTTCACAGCTGCCGTCGGTTCTGGGCTCGTCAGCCGCTAGCTTCAACATCTACTCTCAGGTGTCTTCGAGCAGCGCCGCCCATGCTCCCCGGGCGGGCCTTGATGGACTTGACCTCAACTTCAACTTACAGGGGGCCGAGGAGTTCCCTCATATCGGGGAATATGAGAACTACCTTCAGTCCGGTGGCGACCAAGGGGAAGATGAGGGCAATGGACAAATGAGGAAGGCGGTGATGCATCAAGTGATGATGGAGGCAACACATCATCAAGTTATCTTTCACCATATAGGCGTACAAGGTACCATGTGGCGCAATGGCAAGAAGGCAACGCCACAAGGTATGAAAGAGACCTTTAACCATGCACATTCCCAAGTTAGAAATGACATAGAGCGGTCTTTTGGAGTTTTGAAGATGAAATGGAGGATGTTGTTGGATATGCCAAAATTTTCCGCCCGAAAACAAACAAGAATAATTGTTGCGTGCATGGTTCTCCATAATTTCATTAGAGAGAGCAGAATTGCTGATAGGGAATTTGATATGTGTGACGCGGATGCAAACTATTTTCCAATGCCACATTCATCTCAAGATAATTGGCCAGAAGATGAACCTCTCGCAGAAGATACCAACATGAATGCTTTCCGTGATGAGTTAGCTAATGCTTTGTTCAATGGATTGTAA</cdnaseq>

Protein Sequence

<aaseq>MERDSGFNFFSQLPSVLGSSAASFNIYSQVSSSSAAHAPRAGLDGLDLNFNLQGAEEFPHIGEYENYLQSGGDQGEDEGNGQMRKAVMHQVMMEATHHQVIFHHIGVQGTMWRNGKKATPQGMKETFNHAHSQVRNDIERSFGVLKMKWRMLLDMPKFSARKQTRIIVACMVLHNFIRESRIADREFDMCDADANYFPMPHSSQDNWPEDEPLAEDTNMNAFRDELANALFNGL</aaseq>

Gene Sequence

<dnaseqindica>1..228#1038..1106#1962..2369#ATGGAGCGTGACAGCGGCTTCAACTTCTTTTCACAGCTGCCGTCGGTTCTGGGCTCGTCAGCCGCTAGCTTCAACATCTACTCTCAGGTGTCTTCGAGCAGCGCCGCCCATGCTCCCCGGGCGGGCCTTGATGGACTTGACCTCAACTTCAACTTACAGGGGGCCGAGGAGTTCCCTCATATCGGGGAATATGAGAACTACCTTCAGTCCGGTGGCGACCAAGGGGAAGTACCACGCGGGGCTCTGGTCTCCCTACCCTTCGCACACAGCGCACACTGGGAGTACGCAACCTGTGGATGGTAACACTGTGGATGGAACCACAACCTTTGTGCCTGGACAAGACTTTTTTGAGGAAGAGGAGCATGTTGAAGATGCATAGGGAGATGATGCTTCAGAGGACGTTGCAACTCTATGAGTACAGATACTCGCAAGACCAAGAGGTCGCTGGGTAGTACTACCAGCACATGTGACAGTCCTATGAAGAAGAGCAAAAGCCCAATGTTAGGTACATGAGGCAGATAACCACTAAATTCTCCGAGTCTATGGATATCAGTCAACAAGTGATCTAACAAGCACACTTTGTGAAAATGGAATCCAAAAAAGAGAAGGAATACTTTTCAGTGAAGAAGTGTCAAGAGCTGGCTTTTGAGTGTGGGATAGAGCATGATAGTGCTGAGGTGTATGCAATGGGCAAGATGTTCCAAGATCCTTTCCAGCGGGAATTCTTCTGCGGTCTGCCCAGTGCCTCCACAAGGCTCAATTACTTGAAGAGATGGTGCAGGGACAACAATATGTCTTTGTTAGGAACTATTACCTGTGATGGACTAATCCTTTTGTGGCTCTAGGCTCATATTATCTATGTGTTGTGATGAACGTATTATCTGTATCCTGTGTTGAACCTTTTATCTTTTCATGTGATGAACCTATTATATGGTGCTGTGATGAATCTGTGATTTTTGATGATTCCATTTTGTGGGCTTAATTGAGCATTCCTTGTCGATTAATGTTCTGACTATTTGTTACATTTGTTGAAACAGGATGAGGGCAATGGACAAATGAGGAAGGCGGTGATGCATCAAGTGATGATGGAGGCAACACATCATCAAGTGAGGATGAGCTTCTGTCGATGGCCCTGAACAATTTGAAGACGGCCTAGGAATTGATTCTGCAGGTTGCCCCTATGTTCGGTATGTACTTCGACAAATACTTTGTGAAACTACCAAGAAGGGTGGCTGGTGAATCCGGATTGCAATGGGTTCAGAGGACACTAGCTCGTGATAACTCTTGCTACAACATGTTTAGGGTTGAGAGACCTTTATTTAATAGGCTGCATAATACGTTGGTCCACTCATATGGTTTGCAGTCAACATCAAGAATGTCATCGGTAGAGGCTTTAGCTATGTTTTTGTGGATTGTTGGCGCACCACAGTCAGTTAGGCAAGCTGAGGATCGTTTTGTTAGATCCTTAGAGACAGTAAGTCACACATTTGACGGAGTTTTGAGAAGTGTCCTCAAGCTAGCAGCTAACATTATTAATCCAAAGGACCTTGAATTTTCTACAGTGCACCCATGCTTAGAAAATCCAGATTTTTTGCCACACTTCAATGACTATATAGGAGCATTAGATGTGACACATATACCGGTTGTGGTGCCAAAAAGTAAGGTGGTTTAGCATATTAACAGACACAACAAAACCTCACAGAATATGCTTGCTATTTGTGATTTCGACATGAGATTTACCTTTGTGCTTGCGGGATGGCCTTGGTCAGTACATGATATGAGAGTGTTCAACGATGCAATAACCAAATATAGTGACAAATTTCCACATCCACCTCCAGGTAAACTATTCTATCTGTCATGCAAGTATTTCTTCAATTTTCGTTGGTCATATATGTCACTTTATGTACCTGAAGCTGTAGGGAAGTATTACTTAGTTGATGCGGGGTACCCAAACCGTCCAGGTTATCTTTCACCATATAGGCGTACAAGGTACCATGTGGCGCAATGGCAAGAAGGCAACGCCACAAGGTATGAAAGAGACCTTTAACCATGCACATTCCCAAGTTAGAAATGACATAGAGCGGTCTTTTGGAGTTTTGAAGATGAAATGGAGGATGTTGTTGGATATGCCAAAATTTTCCGCCCGAAAACAAACAAGAATAATTGTTGCGTGCATGGTTCTCCATAATTTCATTAGAGAGAGCAGAATTGCTGATAGGGAATTTGATATGTGTGACGCGGATGCAAACTATTTTCCAATGCCACATTCATCTCAAGATAATTGGCCAGAAGATGAACCTCTCGCAGAAGATACCAACATGAATGCTTTCCGTGATGAGTTAGCTAATGCTTTGTTCAATGGATTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001457