Os09g0327400

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0327400| Description = Aldose 1-epimerase family protein| Version = NM_001069425.1 GI:115478592 GeneID:4346747| Length = 3625 bp| Definiti...")
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Gene Name

Os09g0327400

Description

Aldose 1-epimerase family protein

Version

NM_001069425.1 GI:115478592 GeneID:4346747

Length

3625 bp

Definition

Oryza sativa Japonica Group Os09g0327400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10221186..10224810

Sequence Coding Region

10221378..10221443,10221578..10221659,10221746..10221853,10222365..10222462,10222548..10222646
,10222764..10222901,10223310..10223361,10223438..10223551,10224462..10224581
,10224700..10224782

Expression

GEO Profiles:Os09g0327400

Genome Context

<gbrowseImage1> name=NC_008402:10221186..10224810 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:10221186..10224810 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcttcttgcgcgctcaccctcccctccgccatctccgtctctgtctccgtctcctccaattcacctcgacggttcaggcgctctaggagggtggtggccatggccagcgtggggcagaaggtgtacgcgcccggcgtggcggtctccgagggcaatggcgggctgccaaagatcgacctcaagtccccgcatgggagtgaggctgaaatttatctatttggagcctgcgtaacatcttggaaagtccccagtggaaaagacctcctatttgtcagaccagatgcggtgttcaacggccagaaacccatcagtggtggaatcccacattgcttcccccaattcggtcctggtaccatgcagcagcatggatttgcaaggaacatgaattggtctatcactgattcagaagctaatgaaggagatccagctgtaactttggaactaaaagatgactcttatagccgttcaatgtgggattttagcttccaagctctgtataaggttgcattgcactctacaagcctgtcaacaacactgaaaataacaaatacagacgataagcctttttcatttaactcggcactccacagctatttcagtgcttcaatttctggtgtttcagtgaaaggtctcaaaggttgtaagaccctaaataaggatcccgatcccaaaaaccctttggaggggaaagaagagagggaagaggtgacttttccaggatttgtcgattgcatttaccttggtgcaccgagtgagctcaccctggacaatggattgggtgacaaaattgtgatatcaaatgcgaattggtcagatgcagtgctgtggaatcctcacttgcagatggaggcttgttacaaagattttgtctgtgttgaaaatgcaaagattgaaacattacaactggggccgaaccaatcttgggtggcagagcagaaaattgaactgatatga</cdnaseq>

Protein Sequence

<aaseq>MAASCALTLPSAISVSVSVSSNSPRRFRRSRRVVAMASVGQKVY APGVAVSEGNGGLPKIDLKSPHGSEAEIYLFGACVTSWKVPSGKDLLFVRPDAVFNGQ KPISGGIPHCFPQFGPGTMQQHGFARNMNWSITDSEANEGDPAVTLELKDDSYSRSMW DFSFQALYKVALHSTSLSTTLKITNTDDKPFSFNSALHSYFSASISGVSVKGLKGCKT LNKDPDPKNPLEGKEEREEVTFPGFVDCIYLGAPSELTLDNGLGDKIVISNANWSDAV LWNPHLQMEACYKDFVCVENAKIETLQLGPNQSWVAEQKIELI</aaseq>

Gene Sequence

<dnaseqindica>3368..3433#3152..3233#2958..3065#2349..2446#2165..2263#1910..2047#1450..1501#1260..1373#230..349#29..111#agcttctcccctcctcaaccaagcagaaatggcggcttcttgcgcgctcaccctcccctccgccatctccgtctctgtctccgtctcctccaattcacctcgacggttcaggtactaatctctgtgcccctgacctgtactggttcaagtcgatctcctgtgcgtgcgaaggattgatccctggtggtggtgtctgtgttttttggggggcgttcttggatggatgcaggcgctctaggagggtggtggccatggccagcgtggggcagaaggtgtacgcgcccggcgtggcggtctccgagggcaatggcgggctgccaaagatcgacctcaagtccccgcatgggaggtaattctaggtttggttgatttggggtttctttttattttaaggtgaaatatttggggtggataacttgtgtgagattcttggagggattgtggtagtttggtttgtgagtaggaatgttagatgtatggtgccaaaggtggaggaacttggttgtgtttgtttgcttgttttttttttttttttttgtagagatgggataaatatttgtactgcattgaactgggtaatgcagcatgagtagcagaagaactgattcggagaataatttaccattcggttgcttttagtttctggatatttctctggccagtactcaaaaactggaaaagaaatgaatttttagaatggtgattttgtatggtttggtcttcttattttctacaacgtacttgattgttggactgtgaagattacggaagtggtttcacaaggctggaatggaaggttcattgttcagaatttggcgctgtgagatggaactgtgcactacataatataatcatacagttgctatgatactgaaaagctttgagatatactgagagaacaaaatggtttcagtgaaaaatgaagcaggagcatttgccacgtgttttcaaaaacacacagatgtcacaatgatttattgtgcaacttgccattcaagtccaatcttttccattgtgctgtgtgattagtcagctagtacaaaataacactacgagccatgaattgctagagttggataatcttgaaataatattgaatggtccagatttgtataatttgggatcttgggtacctcctaacttacccttcaaagtttcaagttactatcggtttctttcaattgacacaacaaaggtgtgttatcaggttttgtactttttttcaatttgttaattatgtgctcattttatgcatgaagtgaggctgaaatttatctatttggagcctgcgtaacatcttggaaagtccccagtggaaaagacctcctatttgtcagaccagatgcggtgttcaacggccagaaacccatcaggttggcgctgaagtttaggataaattatctgaagcttaacaaatgtcatgctaaccatcttctttcctgaaaccagtggtggaatcccacattgcttcccccaattcggtcctggtaccatgcagcaggtttgtgaaacccattttctgttgtagccatttagataggaaagaaactaatatatttaaattctcatcagagcatatgactaaacagactttgatacagtcaagtgaatgatatcatatttcagattgatgtcacatttaatatatacatcaatctggaaaatgcatgtagtaacatgttaagcagggaacccaagttagcctgaaatgaactacctgcagcctgccaacattatacattcctttaccttctgtgcagtacgtgatacaactaatcgttcttaaatagttttacatgtaccatggtgttgacaagttaatgttcatgtacattcatcagcaactgcagaaaacacgatttatgctgaacccttttttaagtaaatctaatttcacttttttttacagcatggatttgcaaggaacatgaattggtctatcactgattcagaagctaatgaaggagatccagctgtaactttggaactaaaagatgactcttatagccgttcaatgtgggattttagcttccaagctctgtataaggttaaaccctgctatcgtactatgtgccattgtgccttgctgcactctgcaaaaccagaatcttatcagcactatccaaaaactgcaattcaccaattccaattaattatcttgcaggttgcattgcactctacaagcctgtcaacaacactgaaaataacaaatacagacgataagcctttttcatttaactcggcactccacagctatttcagtgtaagtagcagtttcatgaaggaaacaaaatcttatttgtttatcaagcacatcattattaattctcaagtatttggttgtacaggcttcaatttctggtgtttcagtgaaaggtctcaaaggttgtaagaccctaaataaggatcccgatcccaaaaaccctttggaggggaaagaagagaggtcagttttgcattttgatcagtcttttgttatttttgtttatattttgttcttctatactacagtaacatttgaaactcccatggtcccacatttttccaataatatatttctttccctgaattgttcactgcattggtggaaaataagagctatattctgaatttctgattcctcctaggtgtgttcattcttggttttaacgggttgggaaaaaaataacatgacgtcatttatttgttcctagatcacatatgtccaatcttggagggttatgaaaaaaatttaatgagcaaccctagttcttgccttgtcttatcttactggatttgtcacttttctagacggtgggcactgttagcagcttggtgctgttggccattgcattgcttgtctttttatcctaccctgtgttgaacttgggaacaaatgtgcactccttttaattgtgtaatatgttgaacacaacgtaaatattagatatacttctcagccacttcatatgatacagggaagaggtgacttttccaggatttgtcgattgcatttaccttggtgcaccgagtgagctcaccctggacaatggattgggtgacaaaattgtgatatcaaatgcgaagtatgctaaattgatttgttacaagaggaatcgtataaactctgtaaagattgcatcataaaattgtggttaatttttaaatacagttggtcagatgcagtgctgtggaatcctcacttgcagatggaggcttgttacaaagattttgtctgtgttgaaaatgcaaaggtatgacaactaatacaacaaatgcacatgaagtttcgctaacaattatagacaccacaaatgaaaatttaagaaaaacatgttgataattagtatgtagttttctctaatgatatgatcaattgctgatgcagattgaaacattacaactggggccgaaccaatcttgggtggcagagcagaaaattgaactgatatgaattatgaagctaaactgggcaaaacaatagagtacaacaattatgttgcaaaaatgaacttctctttttctttacatcatgaaatgcaaatgtcatagcccctaatgtatcatctagtaggtggcataagtcatatttttgaaattgttttatgtaataaataagtaaataaataaattcagttctcccatt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0327400, RefSeq:Os09g0327400