BGIOSGA001503

From RiceWiki
Revision as of 10:22, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001503| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001503, complete gene.| tag = B1074C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001503

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001503, complete gene.

LocusTag

B1074C08.35

Ensembl Transcript ID

BGIOSGA001503-TA

Ensembl Protein ID

BGIOSGA001503-PA

Length

7376

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21283944..21291319

Sequence Coding Region

21291036..21291319,21287132..21287261,21286025..21286162,21285763..21285896,21284626..21284751
,21284407..21284510,21283944..21284335

Genome Context

<gbrowseImage1> name=IndicaChromosome01:21283944..21291319 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:21283944..21291319 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGAGGGGCGGCGCGACCGCCGCCTCCGCCGCGAGGGCTCTCCGCTCGCGCCTGATCCCCGACACGTCCCACCACCCGGCCACGGCTCTAGCTCCCATCGCATCGCCGCGCTCCTTCTCCTCCTCCTCCTCCTCGTCTGCCCCCACCATCGCCGCCGCTGTGCCCGCCGTCGCGGAGGCTACGGCGGCCGCGGCCGCTGTTTCGAGGCAAGCTGGATCCGTCTCCGACGCGCTGAGGCACTACGGGAGGTGCTACTTCGAGCTCTCCAAAGCCCGCCTAAGTGCCCTTGTTGTGGCAACATCTGGGGCTGGTTATGTGCTCGGAAGTGGCAACATGGTAGACATAGCTGGACTTTGTTGCACCTGCGCTGGTACCATGATGGTTGCAGCATCTGCAAATACTCTCAACCAGGTGTTTGAGATAAAGAATGACGCTAAAATGAAAAGAACCATGCGACGGCCCCTACCATCAGGGCGCATTAGTCCTGCACATGCTGCCATGTGGGCTACTAGTGTTGGAGTTGCTGGAACAGCTTTGTTGGCTTGGAAGGCTAATGGCTTGGCGGCTGGGCTCGCAGCTTCTAATCTTATTCTGTATGCATTTGTATACACACCATTGAAGCAAATACACCCTGTAAATACATGGGTTGGAGCAGTTGTTGGTGCCATACCACCACTTCTAGGGTGGGCAGCAGCTTCGTCTGAACTGTCACTGAATGCTATGATTCTCCCTGCTGCATTGTACTATTGGCAAATACCACATTTTATGGCCCTTGCATACTTATGTCGGAATGATTACCTTGCTGGAGGGTACCGAATGTTTTCTTTTGCTGATCCTACTGGTAAAAGAACTGCATGGGTATCACTCAGAAATTGTCTATACATGCTGCCCTTGGGATTTTTTGCATACAACTGGGGTCTCACATCTGAGTGGTTCAGTCTTGAAGCATCACTTCTAACTTTGGGCCTTACAATTGGAGCTCTATCATTTGTGCTGGAGCCAACCCCCAAAACTGCAAGGAGAATGTTCTATGGTAGCCTTTTGTATCTTCCTGCTTTTATGGCTGGACTTCTGTTGCATCGGCTGCCTAATGAGCAAAAGGAGCATAATGTCACTCAGACGAGTGAAATCACCGGAATTCTTTATGGTGCTGAACAGCAGGATGAAGAACGAGCTAGACAGAAGCGTGAGGACCGAAAACCTTCTCGTATTCACTCGCGCCCTCCGGTTGCCTATGCTTCTGTGGCCCCTTTTCCTTTCTTACCAGTACCTATATATGTCTCTACCCAAGGTCATGAGCTATGA</cdnaseq>

Protein Sequence

<aaseq>MWRGGATAASAARALRSRLIPDTSHHPATALAPIASPRSFSSSSSSSAPTIAAAVPAVAEATAAAAAVSRQAGSVSDALRHYGRCYFELSKARLSALVVATSGAGYVLGSGNMVDIAGLCCTCAGTMMVAASANTLNQVFEIKNDAKMKRTMRRPLPSGRISPAHAAMWATSVGVAGTALLAWKANGLAAGLAASNLILYAFVYTPLKQIHPVNTWVGAVVGAIPPLLGWAAASSELSLNAMILPAALYYWQIPHFMALAYLCRNDYLAGGYRMFSFADPTGKRTAWVSLRNCLYMLPLGFFAYNWGLTSEWFSLEASLLTLGLTIGALSFVLEPTPKTARRMFYGSLLYLPAFMAGLLLHRLPNEQKEHNVTQTSEITGILYGAEQQDEERARQKREDRKPSRIHSRPPVAYASVAPFPFLPVPIYVSTQGHEL</aaseq>

Gene Sequence

<dnaseqindica>1..284#4059..4188#5158..5295#5424..5557#6569..6694#6810..6913#6985..7376#ATGTGGAGGGGCGGCGCGACCGCCGCCTCCGCCGCGAGGGCTCTCCGCTCGCGCCTGATCCCCGACACGTCCCACCACCCGGCCACGGCTCTAGCTCCCATCGCATCGCCGCGCTCCTTCTCCTCCTCCTCCTCCTCGTCTGCCCCCACCATCGCCGCCGCTGTGCCCGCCGTCGCGGAGGCTACGGCGGCCGCGGCCGCTGTTTCGAGGCAAGCTGGATCCGTCTCCGACGCGCTGAGGCACTACGGGAGGTGCTACTTCGAGCTCTCCAAAGCCCGCCTAAGGTGTGCGCAGTTTGCTCCCTCTCCCATGTTTGTCGTAGTAAATTTAGTTCAAGTGGAAAAAAAACACACGCACCTTTCCAGTTGATGTTTGTGCGTTTCTTGCAAATAGCTCTGTCTTGTCTTCATTTTGTTGTCTAGGTAAAATGGAATTACCTCCTTTCTTTCATCTTTCATCAATAAGGTTACTTTCAACTCTTATAATTGAATTGGAGTATTGGGATAAATGCTATGTATATTTGGTTCTTATGGTTGTGTTCTAACTTCTAGGATGCTAAAAACATTTTTGCGGTCTTTCATTAGAGTAGTCAAACCTTAGTATATGACTATATGCACTGAAGTTCCGTTTATCACAAAGGAGTAGGAGCTCATTACTACTTATTGATATGTATACCATGTAAGAATTAAGACCATTTCATTTAAATTGGTATATTAAAATGTGAATCCTGACCCCTTGAGGGCTGTGCCAAATCGACCCCTTCTTTTATTGTCCTCTGCCAACATATGGTGCTCCATTAAGCAAATTAGCTTATTGTAATTCTTCTCAGGGGCGAAGCCAGGAAAATGGTCACCGGGGTCTACTAACTAATGATACTAACAGTAGATCTATAGCTTGCAATGACCTAAGACTATGCATAAGATAGAACTAAATTAACAGTGGCATATTATGATAAAATAAAGTCTGTTGCTGTAGTGGTTACCTCTTACATGTTACAAATCTTGTCTACGGCTCCTATCCTCCATCTTGTGAAAGCCAACAACCACATCATTATTTGGAATTGAAGCTAGCATTTCCGGCTCGACGAAACATATGATACAATCATTCATAAATTGATCACCAATACGATTCCGTAGAATTTACTCCACCACAATTCTCATTATCACCATGGGGGGTATTTTTGTTTTCAAGAATCAATCCATCATAGTTTTCATGCCTATGAAATAGTTATAGAACAAGATTGATCAGGAACACAATTACACAATATAGACAACAAATGCATAAGCAGCCACTCTTAGCAAAACCACTAATTTCTTACCATCCGTTATGCTGGGAAGAAAAAGAATTATGAATATATGATTCAATCCTCCTCGTTCACGACCATCAGGCATCAGGCCATGTAATAGAAGTCTGAATAAATTGAAAAGTGCATATTTCAGAACCCTAAATTCCTAAGATTAGGTTTCAGAGATGAGAAAACAAGAATTTGGGATAGTCCCCGCAGAAATAAAAATTGGGATAGGGTTACCTACTTACCTGATCAAACGGCAGCTCGGCTGCTCGCACTGGCCGTCGCGGCGTCACTGATCACCTAATCCTAGTTCTTGACGTCTTTGGTCTTCAGCGATTCGCCCGTTCGCCGCCCGTCCGGCCATACCGGCGTCTCGCCCGCCCTTGCCTAGATGTGTGACTCGAGAAGACCTGAAGACGAGAAGTCGAGACTCCGTAATTACCAGGAAGGAATACTAGAATACGTTATCAAAATAGGGAATTTCTGGAGACTAGTGGAGTAGTGGGCTTCTAGCCTCGTGGGCTCAAATCCAAGCGTTTTCTCATTATGTGGGCTGGGCTAACCTAGCTTAGATATTAATTTGTTTGTTGTGTCATTACTGCTAATCACAAGTGGGCTTCAACTAATTAATTCTACTGGGGTCTAATACTTTTTTTGACCGGGGTCAGTGCCGGTAAAATAGAGGGGGTATAACATGCTTGTTAAAAATCGTCGGGGTCAGTAGACCCCGATGCTTTGCTGTGGCGTCGCCCCTGATTCTTCTGATTATACGATAGAACTGGATTGAAAAGGTATTGTAGAAAAAAGAAGGCAAAAGTCATGTCCGTATGTCAAGGATGCAAAACTAAATTTCATGATAAATAAGTGTGTCATTTCAATGCTAGTATTGTAAAGATGCATAACAAAATTTCATGATTACAAACGTGGCACTAGCACCTAAGCATTTCAGTTTTCTTGTCATTGTAAGAATGGTATGTTTGGCATTTATATGAGTCAGCACTTAATAGAAGAAATTTGCATGTTGGCGCCTTCATATGTTGACGTATGCGCTTGTGGTTTGTCTCTTCGAGAAAAAGAGTCACGTGTATGATAAATCGTGTTTTTTATCTTCACCATTTTTTTTTGAACTTTAGGACCTCTATCTCTATGTGCTCAAGTATGCACGAATTTGCCAGAACATCACTTGTGCTGGAGATCTGTTTTATGTCTAATCCCTAATGAGCTTTCATCAATGTTTTAAAACGCATCCATTATCAACTTAGAGGTTGGTTCACCTTGATGATTTATCAGTGTAAATCATTGGTAAAGTTTTGCTGCTTACTGCCCTCGCAGTGCTTAAATGTTCTCTATAGTAGTATAAGAAAATACCCTGGGTTCTTGTTTCTGTTTTTGGCTTCATCGCATTTTGTCTTTCAGATTTCTTTCATGTCCTCAATAGAATTTAGTCAAGTTACTCATGTCACAATTGACAAATAGCTGTAAAATATATATAGGACCCATAACCCAATTATAATGGTATGATAGTATTTCTTTCGAAACAAACCTACATGTATGATCTTTATGTATGCAACTTAAGTACTCTAGAAGATGCTGATACTCAAAATTTTAGAAGTTTTGATCATATGCTTGTTCAAAACAACAAGTATTTGTGACCAGGGGGAGAAAAATCCAAAGTAAAGAGACGTACAACAGATTAAGCAACTAGCGTGAAAGCCTTTTTTCTGGATTGAGTGCTAAGCAACCAGACACTTGTCCATCCATTTTCTTGCTTGGAAAAAAAAAGAGAGTCAATCTGACTTTTATTGTCATTCTGGATTGAGTAAAAGAAGGGGTGTATGATATAAAGGACTAGTCAAAACCATCATGATCTCTAACTCTCTATTATGTACTAAACTAATAGAGAATAAGAAACTCCTAACAGTTAGATGCTTTTTTTTTTAAGATAAAGGAATATATTATTCCAGCCTCTGCATAGGCCATGCACTCAACCATTCATCATTACAAGGATTTCCAGTTCAAAATAAATAATGCTATCAAAATTGCACGTTCATAAAATTTAAGCTTGAATGACAATGCATTAGCACAAAGCCTATTAGTAAACATCCACCCATGCTTGGAAATGTTTCCATCACCATAGTCTCCAAAATACGGCACACTCACTTCATCTGCTCCCTTGGTAACTTCTTTTGTAGTAAGGCCCAGAAGCGAGTCCAATGTGTCCCCCTGAAGATCACCTGCATATAGGATTTCATTTATGTCTTGTCCAAAACAATGCCATTCCTCGATGACCACAACGCCCAAAGCATAATTGATGCTTAATTTTCTTGTAATCTATACTGCAATATAAACATTCATACTTGTAATTGCCAAACAGTTTTCAAGGTTGCATAAGCAATAATTCTGTAAATTGCAGGCGGTAGGTGGCTAATCTCTTAGCATGCAAGAGCTTGCTGTATCAGGCTCCTATCTAACCTTCATTATTCCACTTTTTAGTTGTGCACACGACTTCTTAATCTCCCTAGATGCTGTCGAATTTGTTGTTAGAAACTCAGAACATGTAAATGGGATCAATACTGAATTCAAATATTTGAGCAATACACATTGGTTGTCAAAAGTCTTTTGAATTAGGCTTAGCCATCTGCCATTATCTCTTACCGAGAAAAACTGTGATATACTCCGTCTCTTTCTTTTGCTAGCATTAGAACTGCTTGTAAGTGGTCAGTTGTTTCTTTGTTTTGATCATATATTCTATTATTATGGTATTCAGTGCCCTTGTTGTGGCAACATCTGGGGCTGGTTATGTGCTCGGAAGTGGCAACATGGTAGACATAGCTGGACTTTGTTGCACCTGCGCTGGTACCATGATGGTTGCAGCATCTGCAAATACTCTCAACCAGGTATGTGCTTGTTTTTCGAAAGCTTTATCCATCAGTATGTTGTACTAAACCAATATTTAGAGTGAATTGCATAGTAGGCCACCTATTTTTACCTTACTTTCACTTTAGACCACCCCTAAAGCAATATTTTCACTTTGAACCACCTTTTATTGCCTTTTGATTCATCCTGGATCCTTTGTTTTTCCTCTTCCTCATCTTGACAATGCGTCAATCTCAGCCGCTGTCTTGCCACCGTTGCCACCGCCTTTTGGCGGGTCTCTCTTATTCGCTACTTCCCTTCACTCTCGAGTACTTCGCCATGCAAATCTGTTTGGCAAAGCTACCAAGAATCCAAGATGCTCATGTGCAGCTGTGGGTTGATGCACGAGCTCCAGCATGGTGGCAAGCACCTGTTCTCCATGAACTCCGAATAATCTGCAGGAACAGCCAAACAGAGCCAACGATTCCTTTAAGGTTACATCAACCTTCTTGTTGTGCTGGTTCAGTTTTTCACAGGCTCACCACTGCCGATCAATTAGCAAGAGCTGGCACACATCATCTCCTCAATTCTTCGGTGTCTGATTTTCTCTGCATGAACCTGTTTATCCTTTGCTTCTCACTGACTGGTGGGTCACCAGTCCAAGCTGCAACTGTTTGGTAACAAAACTGGTGTAAAGTGATAAGTTTTGTAAAACCTAGTGTAAACTACAATACAGGTAATAAAACTAGCCCAAAGTGAAATTTACTCCAATATTAATTATATTTATGCTTGCACATCTTTTATTCTTCATTTACTCACATTGTCATAAAAAGCGTCAGACGTTCATTTCGTTGTTTCCAAAATATTTGCATCCTATCAGGATCTGTAGCTATTAAGAGTTTAGGATGGACCTTGTTAATTATAGTTGTTTTCGTTCAGAGAAAATGAATGTTCTGTACTTGCTTTAAGCATCTGTATCTGAATACAATTTGAAATAACTTTGTTTTTAGGTGTTTGAGATAAAGAATGACGCTAAAATGAAAAGAACCATGCGACGGCCCCTACCATCAGGGCGCATTAGTCCTGCACATGCTGCCATGTGGGCTACTAGTGTTGGAGTTGCTGGAACAGCTTTGTTGGCTTGGAAGGTTCGTACAAGATCTTCTCTATTTATCTGCACATGTTATGTGTTGTTTTAAATGTGTTTCGTTTCAGTAGTTGGTATAGTACTGTTATTACATCTGAACACCGTAAAATTTTGGCAAGGTTTCTGCAGGCTAATGGCTTGGCGGCTGGGCTCGCAGCTTCTAATCTTATTCTGTATGCATTTGTATACACACCATTGAAGCAAATACACCCTGTAAATACATGGGTTGGAGCAGTTGTTGGTGCCATACCACCACTTCTAGGGTATTCAACTTGCTGAACCATTTTGCGTTTGCTTAAATGCAGTTTGAAGTAGTAAATTTTCTATGGAGGGTTATGGTGTCATATGTTCTACTTTGCTTCCTAGTTTTACTGCTGTGTAATGTCAGAAAATAATTCAACAAAAGCTCTCTCCATTTCTTGAACGAGTGGCGAAATTTTGAACATAAGCAACAATGGAATATATATACCAAATAGCCTATTTGCAGTTCCACACAATGAAAATGCAAATAACAAGCCATTGTTGTTTTTTGATCCTTTGTATATTGAGATTGATTTGGGATTTCGTAACCTGGTGGAACACCACCCCTGCTATCTGAACTATATCTAATACTACTTTAAATGGAGTTCTGTAAACTACCCCTTGAACTTCTTAGTATGTATAAAATTAATCGTATCTAAATGGATAGCCATATCTGAAGTCATATTAAGGTGAATATTCCCTATAGCAAAATGATAGGTAACACATTTCATGGAAAAAATATTTTTTATTTATCGTAGGTCATATTGAAATATATTTTTTATCTGTAGGAAAGCACGAGCATTCAGCTAGTTTTTATAATGTTTGGACTAATGGAGGCCTCCAGGGGCTAATGCACTGGGTATACAGTGAATGCCAGAGATACTCTATATGTGTTAATTCATGTATTCTGGCTGAAATGTCATGATTGCATCAGATGTATAACTGGAACAGTCATAACTGTTCAATGTGTATGGACTAATGCTTTTAAAAAAAACAGAGGCATATTCGGTTCTTCTCTGCATCTATCCTTAATCAGTGATTTCTTCACACTTCATTTAGATTTTGTTAGTTTTCTAAAAACCTTTTAGTATTTGTAACAAACTAGAACGCCTGCACAAGGTGTAAAATGTCAAGCTTAGTTCCTGATGGACTTATCAGTATGTGTCAATGTCCTATCTGTTGAATGCCAATGAGGGACCTTTTTTTCCATTGCCACATGATCTCAGTCCTTAATTTCATCTTCTTCTGTACAGGTGGGCAGCAGCTTCGTCTGAACTGTCACTGAATGCTATGATTCTCCCTGCTGCATTGTACTATTGGCAAATACCACATTTTATGGCCCTTGCATACTTATGTCGGAATGATTACCTTGCTGGAGGGTAACTCTCCTATCTGAATTGATTATTAGCATACTGACTGTAGAATTTACATCAGAATGATTCAAGTGCAAAACCTGTATGTGACTTGTAGAATTGTATGTTCTTTGTGATTCAGGTACCGAATGTTTTCTTTTGCTGATCCTACTGGTAAAAGAACTGCATGGGTATCACTCAGAAATTGTCTATACATGCTGCCCTTGGGATTTTTTGCATACAACTGTAAGTACTCTTATATACTTTTGCCTCCCTTATTTTTCTGAAAAAAAATACTTATGAGACTTGCATTTTAGGGGGTCTCACATCTGAGTGGTTCAGTCTTGAAGCATCACTTCTAACTTTGGGCCTTACAATTGGAGCTCTATCATTTGTGCTGGAGCCAACCCCCAAAACTGCAAGGAGAATGTTCTATGGTAGCCTTTTGTATCTTCCTGCTTTTATGGCTGGACTTCTGTTGCATCGGCTGCCTAATGAGCAAAAGGAGCATAATGTCACTCAGACGAGTGAAATCACCGGAATTCTTTATGGTGCTGAACAGCAGGATGAAGAACGAGCTAGACAGAAGCGTGAGGACCGAAAACCTTCTCGTATTCACTCGCGCCCTCCGGTTGCCTATGCTTCTGTGGCCCCTTTTCCTTTCTTACCAGTACCTATATATGTCTCTACCCAAGGTCATGAGCTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001503