BGIOSGA001513

From RiceWiki
Revision as of 10:22, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001513| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001513, complete gene.| tag = OsI_022...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001513

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001513, complete gene.

LocusTag

OsI_02213

Ensembl Transcript ID

BGIOSGA001513-TA

Ensembl Protein ID

BGIOSGA001513-PA

Length

2014

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20806254..20808267

Sequence Coding Region

20808219..20808267,20808032..20808127,20807836..20807940,20807562..20807744,20807147..20807302
,20806480..20806622,20806254..20806322

Genome Context

<gbrowseImage1> name=IndicaChromosome01:20806254..20808267 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:20806254..20808267 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAACAATATTGGAGGCTCCACACCAACATCGTTAAGAAGATCATGCCCTTTTGCTGATATTAATAATGCAAGTGCTGGGGATTCACCAAAAAAACGTAACAATATTGGGGTCTTCACACCAACATCGTTAACAAAATCAACCCCATTTGCCGATATTACTAATGCGAGCGCGGGGGAATCACGTATAAACAATGGCAGTGACAGATGCACATCCTCCAATGTGCCGCAAAAAGAAAATATGCAAAATCTGCAAGAAGATGGTGCTAAACTCAGCGCATTAGAATTAAGAAGGAAGCGTGCTAGAGAGAGGTATGCATCAATGAGCCCAAAGAAAAAGGAGGCGAGGAAAATGAAGGCCCGTGTGTACAAGCAATTGAAGGAAGACGAATACTCAGGTTTAAATCAAACAGCTAATAATTATGTCAAAGGAAGTGATCAACAACACATGATCACACCTCGGCGTCTACCATTTACAGTGATCAACAATGTAGCTCATTATGATAATATGGATCATACTGGATCCCCTTTCAGCTGCATACTTCAAGGAGCAACACAAAACAGCCATACACTACCTGCAAATACAGCAGTAAACATTACTTTCTTGGTCTGCCTCTTCTCCTGTATATGCCTACATCCACTCCTTCCCCGAGTAGTCCAGGATGAAGCAGCCAGGTCCAGGATGAAGCAATTCACTGTTATGAACAAATTCAAGACGAAGGCCTTACTTTCCAGTTTCCAGTGGGGTACTGAATTACCACTTGAGTGGAGATCATCTGAACTGAAAGCCAACATTTGA</cdnaseq>

Protein Sequence

<aaseq>MDNNIGGSTPTSLRRSCPFADINNASAGDSPKKRNNIGVFTPTSLTKSTPFADITNASAGESRINNGSDRCTSSNVPQKENMQNLQEDGAKLSALELRRKRARERYASMSPKKKEARKMKARVYKQLKEDEYSGLNQTANNYVKGSDQQHMITPRRLPFTVINNVAHYDNMDHTGSPFSCILQGATQNSHTLPANTAVNITFLVCLFSCICLHPLLPRVVQDEAARSRMKQFTVMNKFKTKALLSSFQWGTELPLEWRSSELKANI</aaseq>

Gene Sequence

<dnaseqindica>1..49#141..236#328..432#524..706#966..1121#1646..1788#1946..2014#ATGGATAACAATATTGGAGGCTCCACACCAACATCGTTAAGAAGATCATGTGAGTTTTTTTATCGCTCTATTTAAGGGCAAATTATTCAGTGCATTAAAATGTGTTTTGCATGCTGATTTCGCATGATTTCCTCCCTCAGGCCCTTTTGCTGATATTAATAATGCAAGTGCTGGGGATTCACCAAAAAAACGTAACAATATTGGGGTCTTCACACCAACATCGTTAACAAAATCAAGTGAGTTTTTTTATCGGTTTACATATGTGACTAATATTCAGTCCATTCAGATGTGACTTGCATACTGATTTCGCAATATTTCCTCCCTCAGCCCCATTTGCCGATATTACTAATGCGAGCGCGGGGGAATCACGTATAAACAATGGCAGTGACAGATGCACATCCTCCAATGTGCCGCAAAAAGAAAATATGCAAAGTATGAATCCGAAATGTAAAACATGCAAGTTATGATTTTCCATTTTCTACCTACTAGAGTTAACATTAACATAATTTGCATGTGTGCACAGATCTGCAAGAAGATGGTGCTAAACTCAGCGCATTAGAATTAAGAAGGAAGCGTGCTAGAGAGAGGTATGCATCAATGAGCCCAAAGAAAAAGGAGGCGAGGAAAATGAAGGCCCGTGTGTACAAGCAATTGAAGGAAGACGAATACTCAGGTTTAAATCAAACAGCTAATAATTATGTCAAAGGTTCCTACATAATCACAATTATATGCCAAACCAGTTTTTAATATTGTTGCATGTGGGCAGCTCCACCTGGTGATATCACAAATGTTAGCATTGATGATTTAAGAAGATGCCACGTAAATGATTGTTCTACACTGTAGCAAGGATCAAACCATGCATTATTACAGTCCGTTGATAGGACTGGACCTCATTCTTACATTTACCTTGCATAAACAATATGGCGATACAGTTGTTTTTAAAGTAATGTTCTACGTTCCAACAGGAAGTGATCAACAACACATGATCACACCTCGGCGTCTACCATTTACAGTGATCAACAATGTAGCTCATTATGATAATATGGATCATACTGGATCCCCTTTCAGCTGCATACTTCAAGGAGCAACACAAAACAGCCATACACTACCTGCAAATACAGGTAAATTTGTAGTTTTTGCCTGAATGAAATTTTGTGTTCATAATAATGGTTATTATTACCAATCGAACAGTAGCCAATATGCTTGATTAAAAACGTATGAGATTCAGATCATAACTAATGTTCCAAATATTTTTTAAGAAAAAAATTGATGTATTGTAAAACAACGCAAAAACAAAAAAAAAATAAATAAATATGTTGAATACACATGGTGACCCATTGAAATAGTACTTACGTGGGACAACTTTTTGAAGAATGTACTGAATCTCATGCATTTAGCCAAGACAAGAAACAAAAGAAACAGTCTAAGCGTACTGGCGTGAAGGACAATGAGAAGAAAGGAAATGAATTGTCTAAATAGGCTGCAACATACACAAAAAATATTGTGTATAGAGAGGTCCTCACAGATTAGAAAAGGTATATTATGCGACTAATTAACCATGCACAATATGCTTGCTTAAATTCCATTCTTTCCGTAATTTTTATATTCCAAGTCTAACATTCCGTGTGTTATTTTTCTTGTACAGCAGTAAACATTACTTTCTTGGTCTGCCTCTTCTCCTGTATATGCCTACATCCACTCCTTCCCCGAGTAGTCCAGGATGAAGCAGCCAGGTCCAGGATGAAGCAATTCACTGTTATGAACAAATTCAAGACGAAGGCCTTACTTGTAAGCTGACAGTTATTTCTTCTTCTTTTTTAAAACAAGCGTAGTTGGTTTGTACATGTTTTGCAGCTTACTACTGATGTTAGCAGATTTCTGAGGTTCTGCTTTAGTTCAGATTTCCAATTGCAGTTTAGCATTTCTTGTAATCATGTTGTGGCAGTCCAGTTTCCAGTGGGGTACTGAATTACCACTTGAGTGGAGATCATCTGAACTGAAAGCCAACATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001513