BGIOSGA001518

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Revision as of 10:22, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001518| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001518, complete gene.| tag = OsI_022...")
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Gene Name

BGIOSGA001518

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001518, complete gene.

LocusTag

OsI_02203

Ensembl Transcript ID

BGIOSGA001518-TA

Ensembl Protein ID

BGIOSGA001518-PA

Length

3854

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20601800..20605653

Sequence Coding Region

20605607..20605653,20604093..20604747,20603697..20603789,20603538..20603634,20602911..20602981
,20602648..20602741,20601976..20602067,20601800..20601892

Genome Context

<gbrowseImage1> name=IndicaChromosome01:20601800..20605653 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:20601800..20605653 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTGGTTACCAAATGGAACAGCGGCGCATTCCATTTGTATCCATGGAACGCAAGTATGCTCACAAAGTAGCCTACTGGAAATTCATACAGACTCTGGACAAAGACCAGCTGCAAGCCATAGATGATCTAGGATTTGGGGGCTTAACAAAAATGAATGGAGTCCAAATTCACCGGATTTTATGCAAGCAAATTGCTAGGGAGTATGATGAGCATACTGGAGCTTTCAATATAAATGGAACCATGCACGAGATAACCATTGAAGATGTAGATCACATACTCGGCGTGCCATCAGAAGGTGTTGAACTGGTTGAAGTGCCACAAGCAATCCAAGCTGACGTTGATGACCCAAAGGAGAAAGAAAAAAACGAAGCTCTACAGGCAACAAAGGCCGCTCTGTTTGCATTATATAAAGACAAAAGGGAGACTAAGATAACTCTGTCAGCCTTGCGGGATTCATTGAATTTGAATAAATCTTGTGACGATCACTTTAAAAGGCAGTTTGTGCTATATACAATTGGTCTGATCCTATGTCCTACAACTGAGAGATTCGTCCATTTAGATTACCTAAATCTACTCATAAATATAGCAGATATAAAGAGAACCAACTGGGCTAGCTTAACCCTAAACCATCTGAAGAGGTCAATCGTCAGTTTCCAGCATGATAAGGTCAATCTTAAGGGCAACCAAATTCTTCTACTGATTGTGAATGATATCAAGCTCCCAATCGAGGCCACCAAAGAGTATACCGCTAAAGATCACTCCGGAACAGATGCCAACCAACCAAGTAACATGGATAATACTAAGGCACAGACAACAGATATGGTGGATGTCCAGTTGCAGCTTAAATCAATGAATGAACATTTAATTATATTAAGAAAAGAAATTCAAGAGTTTACATGCACCGAAGAGGATGAGTTCCTCATCGACTACATTAACACTTCACCGCCTGACCGTGTTTTGATCATCGACACATACATCATGTACCTGGAACATAAATACCTTGAAGAGTCACAAGCTCGCAGAAGAGTATATATGATGAAAACGTTCATCACAGGATTATCTTTCTACAGGTCTTCATGTGGTCTCTTCATGCTGAAGTGCATGGAACACTGGAATGGATCAAAGTTAACCACAAAATTTAAGCAGGGTGATGTAGACATCTTCAGACGCAAGCTAGCGGCAATTTTGGTTGGCTCCACATCGAATGATAACACCGACATCCCAACATACAACAAATAG</cdnaseq>

Protein Sequence

<aaseq>MVGYQMEQRRIPFVSMERKYAHKVAYWKFIQTLDKDQLQAIDDLGFGGLTKMNGVQIHRILCKQIAREYDEHTGAFNINGTMHEITIEDVDHILGVPSEGVELVEVPQAIQADVDDPKEKEKNEALQATKAALFALYKDKRETKITLSALRDSLNLNKSCDDHFKRQFVLYTIGLILCPTTERFVHLDYLNLLINIADIKRTNWASLTLNHLKRSIVSFQHDKVNLKGNQILLLIVNDIKLPIEATKEYTAKDHSGTDANQPSNMDNTKAQTTDMVDVQLQLKSMNEHLIILRKEIQEFTCTEEDEFLIDYINTSPPDRVLIIDTYIMYLEHKYLEESQARRRVYMMKTFITGLSFYRSSCGLFMLKCMEHWNGSKLTTKFKQGDVDIFRRKLAAILVGSTSNDNTDIPTYNK</aaseq>

Gene Sequence

<dnaseqindica>1..47#907..1561#1865..1957#2020..2116#2673..2743#2913..3006#3587..3678#3762..3854#ATGGTTGGTTACCAAATGGAACAGCGGCGCATTCCATTTGTATCCATGTATGTGTGTGTGTGTGTTGAAGAGAGAAAGCCAGATAGGAGGTACAACGTGCGCACATGTATGTATTATATCTTGATGTTAAACTGCACTTTTGGCCACAAAAATACATTGCACAATACAACGAAATATCTATCAGTTAAAGCAAAAATAGCCGCCCTGACATTCACACATGTGCGCACGAGGTAGATGGTTGTTGTGCCTGTAATTATTTACAACTGGATGAATAAGCCGCGTTGCAATATAATTATTAAAACTATAACAAAATGATACTTTTGAATTTTGAGCCTAAAAAATAATTGAGATTGCATTGTGTTATGAGAAAAAAAAAGAAGAGATAATTTGAACCATAGATCTATCATCAAAAGGCTAGAAATAATTAAGGTCATGTGGCTTACTGAGAGAAGAGAGAAATAGCATTAAGTACACTTAGTGCTATTGAACTATATAAGTATATAGGATTCGTGGCGTGCAGTACACAACAAACTAGAAATTAACCCACTGTTAATATACGACCGAATTAATTCTCCAGGTCAGTCCATGTTCTACGCTTTTCAGTTTTCATGGTTAGAAAGTAAACCCCTGGTCTCATTGTAGATTTTGAATTTTTGTAGTTGCTCAAGTAATATCTCTTAATTAACAATGTATTAACGCATGCATTACTGTGTAAATGTTTTTAAATGATTTAATTATTCTGAACGCATCGCAGAATATAGTCATTGATGATACCCAACTATGAGCCGCCAGCAAGAATGACAAAGAATAATATTCGAGCCAACAAACTGGTAAGCAACTATTCTTAGGACTTAACGATCGCTCTCTATGCAATAATGAACTAAATTGTGATGTTTATTATCGCAGGGAACGCAAGTATGCTCACAAAGTAGCCTACTGGAAATTCATACAGACTCTGGACAAAGACCAGCTGCAAGCCATAGATGATCTAGGATTTGGGGGCTTAACAAAAATGAATGGAGTCCAAATTCACCGGATTTTATGCAAGCAAATTGCTAGGGAGTATGATGAGCATACTGGAGCTTTCAATATAAATGGAACCATGCACGAGATAACCATTGAAGATGTAGATCACATACTCGGCGTGCCATCAGAAGGTGTTGAACTGGTTGAAGTGCCACAAGCAATCCAAGCTGACGTTGATGACCCAAAGGAGAAAGAAAAAAACGAAGCTCTACAGGCAACAAAGGCCGCTCTGTTTGCATTATATAAAGACAAAAGGGAGACTAAGATAACTCTGTCAGCCTTGCGGGATTCATTGAATTTGAATAAATCTTGTGACGATCACTTTAAAAGGCAGTTTGTGCTATATACAATTGGTCTGATCCTATGTCCTACAACTGAGAGATTCGTCCATTTAGATTACCTAAATCTACTCATAAATATAGCAGATATAAAGAGAACCAACTGGGCTAGCTTAACCCTAAACCATCTGAAGAGGTCAATCGTCAGTTTCCAGCATGATAAGGTCAATCTTAAGGGCAACCAAATTCTTCTACTGGTAGGTGTAATTTCAATTCAAGTTATGGTTTATGCTTGTATGGTGTGACTATAGAAAATTTTTTTAAAAAATTTCTTTCAGCTTTGGTACTAGGAGAAGTTTCGAGTGAGTCACATATACATCCTTCCATAGATTACACCGGACAAGACAGACCACTGATACAATACTAGGATGTGAAGAAAGCCAGAAAGCGTGAAAAAATCCTGTATGGAGTAGGACAGGTAATTCGTGCGTTGTAATTTTTGCACACATAATTAGGACAATGCCTAGTATTAACAATTTGTACACATGTTTCGAACATAGATTGTGAATGATATCAAGCTCCCAATCGAGGCCACCAAAGAGTATACCGCTAAAGATCACTCCGGAACAGATGCCAACCAACCAAGTAACATGGTACATACTGAATTGTTTTTCTAAAATTTTTTAAGTTGTTTTCTAATTATTTTTCCATGCAGGATAATACTAAGGCACAGACAACAGATATGGTGGATGTCCAGTTGCAGCTTAAATCAATGAATGAACATTTAATTATATTAAGAAAAGAAATTCAAGGTACGAGTTGAGAAGTACAACTATCAGTTATCATGAACTAACTATTTTACGTATTAACATTTGTGCATGCTATTAAATCAACAGCGTATGAATGCAAGAAAAACAAACCTTAAGGAGTCGTCGCAAGTCGACGCACCTGGTGTTAGGATGAAGTCCAACAAAAAACATGGCATGACACATGCATCGCCCCCCCCCCCCACAACAAAAGGTATCAAAAAATTTCTATAATGATAAGTAACTCTATACGATTTAGAAACTTGTTGTAACCGAAAATTGTTCATCATAACTTCCTGTAGCAGGCCAAGAAGAAAAAAGATACAATTAACTCGCCTATTGCAAAAAGGGTGCAAACAACAGGAAGGGTCCGCACATCAACTGTACAATTAAACACTGACTTTGTGTACCCAGAGAACCCCAAGAACAAACAGAAGGCAACTCCAGCCCCCCCCCCCCCCCCCCAATACATTCCGAAGGCATGCCTTGCACAAATGCTTCAAAAATTTCGTAACACAACATTTTATATTTGTCATTGAAATTAATTGGGTTGTGATTGCAGAGTTTACATGCACCGAAGAGGATGAGTTCCTCATCGACTACATTAACACTTCACCGCCTGACCGTGTTTTGGTGAGATTAGAAGGATTGCTCCTTACAAGGGAACAATTGCAACCGTTGACAAATCGGTTCTTGCCCGATGGTGAAGCAAGATATGTTATTGACGAAGTAACATCGTACTTACCCTCTATTGTATCATTAAATTATAATTGTTATGTGTACTAAATTATTCAAAATGTAGATCATCGACACATACATCATGTACCTGGAACATAAATACCTTGAAGAGTCACAAGCTCGCAGAAGAGTATATATGATGAAAACGTTCATCACAGGTAAAATATCGATTGACTGCGTGCACGAAATCTCCAAGCGGCAGTTGGAAAAGGGATATATATCAAGAATTACTAACCAAATTGCCCAAAACGAACAGGTAAAACTATTTTATTTCTGTTAAAAAAATTTGCTCGGCATAACAGAACTAAACAAAGCTTGAAAATGCAGATCTTTATCCCTATAAATAGAAATAAGAATCATTGGTACCTGGCTGTCGTCCATGTTAAGCAACGCCAGATTCAACTACTGGACTCATCACCTAGCACCGGTAAACAAGACACGGAACTGACATTAGTGGTGGGCCCATAATATCCCGTACTGCTTTCTACGAGTAAATAACATCCCTTCCGATTTATTCATATTTCGATCTCCTGCATGATCAAAGCTGAAAGGAATGGAGAGATATTTCGAAATATCTGGATACAATGAAAGATCTAACCAAACTATCTGGCCGGATTTTGATTTGTCGACTTGGCCTGTGTTCAGTGTGACAAGCATACCCAGGCAGAAAGATTTGTATGTTACTCTTCTTGGATTAAATGCAATTATCTTTGTTACAAAATTAATTGTTATGTTAAGGATTATCTTTCTACAGGTCTTCATGTGGTCTCTTCATGCTGAAGTGCATGGAACACTGGAATGGATCAAAGTTAACCACAAAATTTAAGCAGGTATGTAGTTTACTACAAAAGCATGTATGTAATGCAATCAATTCAAATTTAAGGCTAAAAAACTACATCTACATACTATACAGGGTGATGTAGACATCTTCAGACGCAAGCTAGCGGCAATTTTGGTTGGCTCCACATCGAATGATAACACCGACATCCCAACATACAACAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001518