BGIOSGA001521

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Revision as of 10:22, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001521| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001521, complete gene.| tag = OsI_021...")
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Gene Name

BGIOSGA001521

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001521, complete gene.

LocusTag

OsI_02197

Ensembl Transcript ID

BGIOSGA001521-TA

Ensembl Protein ID

BGIOSGA001521-PA

Length

7110

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20503266..20510375

Sequence Coding Region

20510290..20510375,20509362..20509509,20508999..20509256,20507468..20507642,20507251..20507312
,20507012..20507175,20506755..20506852,20505944..20506002,20505730..20505864
,20505511..20505653,20505400..20505468,20505169..20505328,20504682..20504763
,20504548..20504598,20503266..20503483

Genome Context

<gbrowseImage1> name=IndicaChromosome01:20503266..20510375 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:20503266..20510375 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAAGGGGAGCCCCATCCTCCCATCCGCCGCCATGGCGCCGCCTCCTCCGCTACGCCCTCCTCTGCGCCCTCCTCCCCCCCTGGGGCACTTCCGAGGCTAATGAACAACTTGCTGAATTTCCACCAAGAGGCTGGAATTCCTATGATTCCTTTTCATGGATAGTTGATGAAAATACATACATGCAAAATGCGGAGATCTTGGCAGAAAAATTGCTCCCACATGGATATGAGTTTGCAGTTATTGATTACCTCTGGTACCGAAAGTATGTTCATGGGGCATACACAGATTCATATGGATTTGATAACATTGATGAGTGGGGTCGGCCATTTCCTGATCTTCAAAGATTTCCATCATCCAGAATTGATAAAGGGTTCAGTCAACTTGCGAACAAGGTGCATGGAATGGGCTTGAAATTCGGAATCCATTTAATGAAAGGGATAAGTTTACAGGCTGTGAATGGAAACACACCCATATTGGACATTAAAACGGGAAAACCCTACGTAGAGGATGGCCGGCAATGGACAGCTCGTGATATAGGTCTTACACATAGAACATGTGCATGGATGCCACATGGATTTATGAGTGTAAATACTGATATTGGAGCTGGAAAGGCCTTCCTAAGATCTCTTTATCAACAGTACGCTGATTGGGGTGTTGATTTTGTGAAGGTTGATTGTATCTTCGGTATGGATTACAGCCCAAAAGAAATCATAACTATTTCAGAGCTCTTGGCAGAGCTTGACCGCCCCATCATCCTGTCCATCTCACCAGGAACCGAAGTGACTCCAGCATTAGCCAAAAACATCAGTCAACATGTTAACATGTACAGGATAACAGGGGATGATTGGGACAACTGGAAGGATGTTAGTTCACATTTTGACGTGTCTAGTTCCTTTGCTGCTGCAAATAAAATTGGGGCCATAGGATTACGAGGAAGATCTTGGCCAGATTTAGACATGCTCCCATTTGGCTGGCTTACAAATGCAGGTGTCAATCAGGGTCCACATAGGCAATGCGAACTTACATCTGATGAACAGAGAACACAGATAGCACTTTGGTCAATGGCTAAGTCTCCTCTAATGTATGGAGGAGATTTGAGGCATCTCGACAATGACACGTTAAGCATAATAACAAATCCTACATTACTGAAAATAAATCACTACAGCATAAATAATATGGAGTTCCATCATGTGCACAGTGAAAGGACTTCCAAAGAAGACAAGCATTCTAGTCGTTTCATATCCGAAGATCTTGTACACGTACCAAAGATTGATGGTGTATCTCTTGGTCTCACTGCCTGCAGTGATGACAAAGCAAATGGATGGAACTATGGGATGCAGGATGACAAAAATATCTCATTTTGTCTGGGCAAAACAATTCCTCTCCTGACATCGGATGATATAATCGTACATAATGAAGAATACCAAACAAAGTTTCACCTGGCAAATATGGACAGTGACGATGCTTGTCTGGATGCATCTGGCAGTCAACGGAGGACATCCTCAGATAGCAAGTTTCCCATGTTTTCAAGGTGCAGGTGGCATGCTATGCAGATGTGGGAGCTGAATGAGAAAGGAAACCTCATTAGCAGTTACTCAAGATTATGTGCCACGGTGGAATCCAACAATAAAGGAGTTGTAACTACAGGAGCAGTAGCACGTGCATGGATAGCAACTGGGAGTAAAGGAGAAATATACCTGGCGTTCTTCAACCTTGACTCCATGAGCAGGAAGATAACCGCGAGAATATCAGACCTGGAAAAGGTTCTCGGGAGTACATTCATAAGAAAAGACACGTGCAGCTGCACTGAAGTTTGGAGCGGGAGGAATTTCGGTCGTGTGGAGGAAGAGATTTCAGCGGTAGTTAAATCACATGGTTCCATGGTGTTTGAAATTACATGTTGA</cdnaseq>

Protein Sequence

<aaseq>MGRGAPSSHPPPWRRLLRYALLCALLPPWGTSEANEQLAEFPPRGWNSYDSFSWIVDENTYMQNAEILAEKLLPHGYEFAVIDYLWYRKYVHGAYTDSYGFDNIDEWGRPFPDLQRFPSSRIDKGFSQLANKVHGMGLKFGIHLMKGISLQAVNGNTPILDIKTGKPYVEDGRQWTARDIGLTHRTCAWMPHGFMSVNTDIGAGKAFLRSLYQQYADWGVDFVKVDCIFGMDYSPKEIITISELLAELDRPIILSISPGTEVTPALAKNISQHVNMYRITGDDWDNWKDVSSHFDVSSSFAAANKIGAIGLRGRSWPDLDMLPFGWLTNAGVNQGPHRQCELTSDEQRTQIALWSMAKSPLMYGGDLRHLDNDTLSIITNPTLLKINHYSINNMEFHHVHSERTSKEDKHSSRFISEDLVHVPKIDGVSLGLTACSDDKANGWNYGMQDDKNISFCLGKTIPLLTSDDIIVHNEEYQTKFHLANMDSDDACLDASGSQRRTSSDSKFPMFSRCRWHAMQMWELNEKGNLISSYSRLCATVESNNKGVVTTGAVARAWIATGSKGEIYLAFFNLDSMSRKITARISDLEKVLGSTFIRKDTCSCTEVWSGRNFGRVEEEISAVVKSHGSMVFEITC</aaseq>

Gene Sequence

<dnaseqindica>1..86#867..1014#1120..1377#2734..2908#3064..3125#3201..3364#3524..3621#4374..4432#4512..4646#4723..4865#4908..4976#5048..5207#5613..5694#5778..5828#6893..7110#ATGGGAAGGGGAGCCCCATCCTCCCATCCGCCGCCATGGCGCCGCCTCCTCCGCTACGCCCTCCTCTGCGCCCTCCTCCCCCCCTGGTCAGTGCCCGGCTCTCCCCTCGCCCGCTCATCTCGAATCTCCATGGGCGCCTTGCTGTTCGCTGTTTTATGGGATTAGCCCGTATGTTGGTTAGCGGTTTGGAGTGGATTCAACACGTTTAGTTTCAGCTGGTTCCCCCGGCGATTATCATTGATTGGTTCAGTTTGCTATGCTCTTGCGTGTGGCCATCCAGAGGATCGAGCTGTTGTAACAGTAATAAATGCTTTTGCCAATTCTTGCTGTGAGGATAGGAGTTCATTTGGCAGAGGAGTCATTGTTTCGGATAAATAAATCTGGAAGAAAATCTCAACCCCAATTAGAACTTTTTTTCTTCGGGCTTTTGACATGCTTTTCGAACCCCAATTAGAACTTTGTGAATCAACAGCACAAACGCCATCATTGTTTGTTTATTAAATACTCTTGCAGTGGAGTTACCTATCAACGGATTGTAATTGGAGATTTGGACATACTTCTTCTGTTTCCATTTTTCATACAGTTGAAGACAACTAGTTGGCCGCACCTATGATTTATCAATGTGTGTGTGTGTGTTTTTTTTCCTGGAACATGTATTTTTACGCAGGGCTTCCTTGTCCTTGATGATTATTGGTTATAGGTTCATTACAAAGTATAATTACACCTGCGTACATAAAATGTGCAAATGTGTGCTCTGACAAGGGGACAACTCCAGCTTGACTGTCGCTGTTCCATCCTTTGACAACCGAGCCCATTCGAAGCAAAAGAAGGAAAGGCTTACGTCTACTCATGCTTTTACATTTCAGGGGCACTTCCGAGGCTAATGAACAACTTGCTGAATTTCCACCAAGAGGCTGGAATTCCTATGATTCCTTTTCATGGATAGTTGATGAAAATACATACATGCAAAATGCGGAGATCTTGGCAGAAAAATTGCTCCCACATGGATATGAGGTAACCATTCAAATTGCTGGTCGGTTTCTTATTTGATAGCAAAATGAATATAAAAATATAAACTTTATCATCATTTTAACTATTTTGCATCATATTGGTGGGTAGTTTGCAGTTATTGATTACCTCTGGTACCGAAAGTATGTTCATGGGGCATACACAGATTCATATGGATTTGATAACATTGATGAGTGGGGTCGGCCATTTCCTGATCTTCAAAGATTTCCATCATCCAGAATTGATAAAGGGTTCAGTCAACTTGCGAACAAGGTGCATGGAATGGGCTTGAAATTCGGAATCCATTTAATGAAAGGGATAAGTTTACAGGCTGTGAATGGAAACACACCCATATTGGACATTAAAACGGTAATGTTTTCCTTCCTTCAAATGGAGTTGGATAACAACTACAGCCACTTTGGCAGTTATGCTTTTCCTCCACTTTTTGAGACTGCCTCAATTTTCTTATTGATCCTTTGTTGAAGTTACTACCATACCTCTGCTCTAAAATATAAGGGATTTTGGCTATGCATTTGTACTGTCAAAATCCTTTATATTTTGGGATGGAGATAATATGTTATATAATGTACATACAACAGTCAATCTTTAACCTCCAATGCAATTTTAAGATCAAATTATAAAATAGCATAAACATAACATTATGGCAAATTTTGCTATAGGACATCCAAATTTTGTGTAATTTGCTGATAGACATTGATAAAACGTGTCACGGCTGAAAGACATCCTAAAAAACTGGTAATTTGCTAGATGACACTTTTGGCTCAATTGGATTGATAAATTATTAAGAAAGACGAGAATGACCCTAAGACCAAATGCTTCAAACATGATTTTAAGGGGAAGAAATAGAAATTATGCAACTTTAAATTTGTCATCACCCCAAATACATCACTAGTATAGATTATATTCCATCTTGGCTCCAGTCTCACCTCAAAAGCTTTTGACCCTAAGGGCATTCTTGTCTTTTTGAAGAATTTCTCTCTCCAATTGAGCCGAAAGTGTCCTCCAGCAGATTACCAGTTTTTTAGAGTGTCTTTCAGCTGTGATACGTTTTTATGATGTCTACCAGCAATTTACACAAATTTTGAGTGTCATGTAGGATTTCAATGTCCTGTTGTAGCCATCCAGACAAACATTTTATCCTTTTTTTTTTTCTTGAGAGTGCAGGAGAACTGTGCTTCATTCCATTAAGACATATTTTATCATTGGAGGAAATTACTATTTTTTTCCATTATGTGTTATGGGCGTAAACAATGCTATCCTATTATTGATCGGTGTTAACATTATGTTGTAGAATGTCTATTCAGCAGCCAATCTTTATCCTCCAATACGTTTTTAAGATCATACTGTAAAATAGCTTAAACATGTGTGTTCTGGTAGTTATGAGATAACCATTTTGGATTTCAATGTCCTGTTGTAGTCTTCCAGACAAACATATTATCATTAGTGAAAATTACTAATTTGCTCCATTATGCATTATGGGTGCAAATAATGCTATGCTATTATTTGATGATTCAAATATTTTGGCTGTTTATTTTCCCTGCAAAATGGAACTCCTCTTCGCTGTGAAAAAAAGGAACTTCTCTAAAATTCTTCAAATTAATTGCAAGAAAGGGGGTTGAAATACTACAGCAAGAAAATGACCAGAAACATAAGTCATTGAACTGCTGTTTGTTGTTCAAAGTGTGTTCTGTTGGCCCTTTTCAGGGAAAACCCTACGTAGAGGATGGCCGGCAATGGACAGCTCGTGATATAGGTCTTACACATAGAACATGTGCATGGATGCCACATGGATTTATGAGTGTAAATACTGATATTGGAGCTGGAAAGGCCTTCCTAAGATCTCTTTATCAACAGTACGCTGATTGGGGTGTTGATTTTGGTATTCTTATAGCATAATTCTTCAGTTTAGTTATTACAATTGTGAGGACTGTGTAGAAAGATCATATATTAGGCAGTAGATGATCATTTTCACGTCATACCGAAACTGAAATTTATTCTGATGGTTTCATTTGTACCATTCTGTTCTGTTCACAGTGAAGGTTGATTGTATCTTCGGTATGGATTACAGCCCAAAAGAAATCATAACTATTTCAGAGGTTAGTAGCCCCATATCCTGTTGATGTCCTTTCAAATTATTACACTATTCGAATAAGCTAATTTCTAAATTGCAGCTCTTGGCAGAGCTTGACCGCCCCATCATCCTGTCCATCTCACCAGGAACCGAAGTGACTCCAGCATTAGCCAAAAACATCAGTCAACATGTTAACATGTACAGGATAACAGGGGATGATTGGGACAACTGGAAGGATGTTAGTTCACATTTTGACGTGTCTAGGTAAATTGAGCCAATATGCTCTGTCTGCAGTTTCTGACTGCAAGAATTCAATCCATTAATTAACCTTTAACTTGCTTTTTTTCTCATTATCTAAAAACGCTTGATTATTTTTCTAGTAAATAAATCATTTCTTCTTACCCCATTACATATTGTACACAGTTCCTTTGCTGCTGCAAATAAAATTGGGGCCATAGGATTACGAGGAAGATCTTGGCCAGATTTAGACATGCTCCCATTTGGCTGGCTTACAAATGCAGGTAATTATTTGCAGTTTTTCTTTAGAAAGTGTTTGTCTTGACATGCCCCTCTAACTGTTCAGCATAGATAAATCACTTATATGAAAAAAAATATTAGAATCATAAATCCCTATTGAATCTGCATTTTAATACTATGGAACCTGGAACCTAGGTGTGTACATCAATATCTTGCAGAACGCTGAGTATCATCTAGTTTATATTTATGCATGGGCTATATTGTTACTTTTGTCCGTACCAAATAAATTGATGCCATTACTTCTTTTTTTTTTTGAGAGGATTTATGCCATTAGATTTTTGTTCAGCAGAATAAAATTAATTTAAACTCAAACATAAATCTTATCCCTAACTTCATAATACTGCAACTGGATGACATATCTCGATTAAGGACAGATCACCGAACACTGAAGATTAAAATACTTGCTTGAGCAAAAGATTAACTCAACCACTCCAATTCAAAACCCTCCACTACATACCACAATTTATCCTTAGACGCATGTCTCGGCAACACAAAACAAGGGTTTTGCTCATTATAGGACTTGACCGATTATATATAATATTGAAATATCTTAACCAATATCTTCTTGGTTTATTGAACCATTCACATGTAATTGAGCCATATCAAGATTTTTCTTCAAATGTTAGGAAAGTGCTGCATATTTATTACTAAGCAACTGCTTTGTAAAGGAAAGAATCTTAGATTCCTTGAAGCATATATAATTATAACAGGAATAAACATTTTTGCTCTAATATAGGTGTCAATCAGGGTCCACATAGGCAATGCGAACTTACATCTGATGAACAGAGAACACAGGTTTGCACTTGTGGAAATCTATATCTGATATTCAATATTCTCTATCCACTAAACTCTTTTTGTTCACATGACCTCGCAGATAGCACTTTGGTCAATGGCTAAGTCTCCTCTAATGTATGGAGGAGATTTGAGGCATCTCGACAATGACACGTTAAGCATAATAACAAATCCTACATTACTGAAAATAAATCACTACAGCATAAATAATATGGAGGTACCCTGTATTTTATTCGTACTGATAGAGCATTTTGTAGGCGTAAATACAACACTAAGCTTGTACAAATTTCCAGTTCCATCATGTGCACAGTGAAAGGACTTCCAAAGAAGACAAGCATTCTAGTCGTTTCATATCCGAAGATCTTGTACACGTACCAAAGATTGATGGTGTATCTCTTGGTCTCACTGCCTGCAGTGATGACAAAGCAAATGGATGGTATATGTTTTCACAACATGGTAAATCAGATCATATATGCAGGAACTATGGGATGCAGGATGACAAAAATATCTCATTTTGTCTGGGCAAAACAATTCCTCTCCTGACATCGTAAGCACCACCCAATTTATAAATTTGGAGTAACTTAAACAGTTTTTGTGATTATATTTTCTCCATTTCAGGGATGATATAATCGTACATAATGAAGAATACCAAACAAAGTTTCACCTGGCAAATATGGACAGTGACGATGCTTGTCTGGATGCATCTGGCAGTCAACGGAGGACATCCTCAGATAGCAAGTTTCCCATGTTTTCAAGGTGCAGGTGGCATGCTATGCAGGTAAATGACGAAAAACATTCCTCGTACAGAATATTAGAGTTACTGCAACCTGAATTTGGATTTGCATTTGAAAATTCCTGCTGTGTATTTTGATTATAAAATATTTGTATTTATACTGTCCTCTATTTAATTGCTTATTTCCTCTTGGATTCTAAGAAGCTCATGTTACAGAATCAGAGTGTCCTATCAAACAAAATACATTTCTTGGCTGCCAGGTCAAATTTGTAATGTTCCCTTCTATTTTTGATAAAATAGCTAAGCCCATGTTTGCTTAATCTCTTTGAACAACCTATGTGGCAAAATTTCTTCTACTGAGTTGTACTGTAGCAAGTTCTAGCAAAATGGTTACTTTTGCTAGTTGGAGATTGAATTAATGCCTTCATTACTCATGAACAATTACTTTAGATGTGGGAGCTGAATGAGAAAGGAAACCTCATTAGCAGTTACTCAAGATTATGTGCCACGGTGGAATCCAACAATAAAGGAGGTACACACTACAACATTTTATTTAGAAAATTATGGTGACTTAGTTTCAACATTATTAGATAAGCAACATAATTCTGTATGCAGTTGTAACTACAGGAGCAGTAGCACGTGCATGGATAGCAACTGGGAGTAAAGGTAGCTGATCTTTCATCTCTTACATACGATCCCGGACTGAATTTTGTTTTAACATTGCGAGGAATAAAAAACTGAATAGTAATGATAAACTTGACTGTTCCTGAAATTCTTATACTTCCTTTAACAAGGTCTGTTTGGAAAATCTGTGAAATCGTTTTTTATAATCTATTATGTGGCCCCAAAACCCTTTTTTAATATTTGAATGGTTTTTGCTTCTGTACTTTGTGAGAAAAGTTTACTACTAGTATCTAAACAGAAGTTCCCAGTGATGTAGTAAGGAATTATTGCAGTAGAACCTGTATTTTTGCCGGCAGCAGCTGTGACAGTGTATTGACGCAGTATTGTGCATAACCTTTCATCCATGCTGTTAATGTGAGATCATGTTGCTCTCTTTTCATCAAAGAAAGGTTTTATATAACAAGAGTTTCCCTAATGAAAAACATGGCATTGATCCACACATGCTAAACAGCAACAAACAGATGAATAAGTCACCCAGTTATTTATTTGGTTAGCAGTCAGTTGCTCAAGTTATCTTGATTAGACAGTACAAATATTCCCTTAGATAACTGGCCATGACTTGCTTTCTGAGCTGTAATAAACTCTTTGAATAGAGTAGTCAAGCAAGATGCAATTTCAATAATTTTTTCTATTGTATCATTAGTGTTACACTGTTACCTCATTCCTATCCACTTCTCATAAATGCAGATACATATATGTTCTAGCGGGTCAAAAGCATAAAAAGAACTCAAAACTAAGCATGAATCTGCCAACTGATGGCTTGACTTTCAAACACAAACTACTCCACTAAGTCCACAATTATGATTTAAGATCTATTCGATTCATTTAGCATTTAGCAGTTGTAGAGATTTTATAAATTGCTGCCACTTTTCTGAATATGTCACCAGACTTCAAATGTTAATCTAGACATAATCGTTTGCAGTGAGACATTTGTTTTAGTCCTATTTGTCATGCACATTAGCTGCAGCTTCTAAGAGGCGGGCTGTGGCAATATATGTCACAGATTTTTTTTTTCTGAGGGCTAATGTCTGTGGTCCATTATATAGGAGAAATATACCTGGCGTTCTTCAACCTTGACTCCATGAGCAGGAAGATAACCGCGAGAATATCAGACCTGGAAAAGGTTCTCGGGAGTACATTCATAAGAAAAGACACGTGCAGCTGCACTGAAGTTTGGAGCGGGAGGAATTTCGGTCGTGTGGAGGAAGAGATTTCAGCGGTAGTTAAATCACATGGTTCCATGGTGTTTGAAATTACATGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001521