BGIOSGA001536

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Revision as of 10:22, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001536| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001536, complete gene.| tag = B1075D0...")
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Gene Name

BGIOSGA001536

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001536, complete gene.

LocusTag

B1075D06.1-1

Ensembl Transcript ID

BGIOSGA001536-TA

Ensembl Protein ID

BGIOSGA001536-PA

Length

4322

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20159873..20164194

Sequence Coding Region

20164114..20164194,20160359..20160472,20160117..20160253,20159873..20160035

Genome Context

<gbrowseImage1> name=IndicaChromosome01:20159873..20164194 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:20159873..20164194 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGTTGGAGAAGTGCTGGTTCTGCTCCTCCACCATCTACCCCGGCCACGGCATCCAGTTCGTCCGCAACGACGCCAAGATCTTCCGCTTTTGCCGGTCAAAATGCCATAAAAATTTTAAGATGAAGAGGAATCCTCGTAAGGTTAAATGGACAAAAGCATACAGATGCTTGCATGGGAAGGACATGACGCAGGACTCCACCTTTGAGTTTGAGAGGAAGAGGAACAGACCAGAGCGCTATGACCGGAATGTCACTGCACAAACTCTTAAGGCTATCCCTCTTATTACAAAGATTAGACATGAACGCCATAAGAAACATATTACAGAGAGGCAAAAACAGGGTAAGACAAAGCAAAGGGAGAGAGATGCTAAGGAGTTGGAACAGGATATTCAAATGCTCCCGAAGAAGGATACCATGCTGTCAACACAAAAGACAAAGGTCGTGGTCAAAGTTTCTCAGCAGCAGACCGAAGAAAATCTTATGGAAGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRCLHGKDMTQDSTFEFERKRNRPERYDRNVTAQTLKAIPLITKIRHERHKKHITERQKQGKTKQRERDAKELEQDIQMLPKKDTMLSTQKTKVVVKVSQQQTEENLMEE</aaseq>

Gene Sequence

<dnaseqindica>1..81#3723..3836#3942..4078#4160..4322#ATGAGGTTGGAGAAGTGCTGGTTCTGCTCCTCCACCATCTACCCCGGCCACGGCATCCAGTTCGTCCGCAACGACGCCAAGGTTCGCGCGGTCATCCTGCCTTTTGCTCTTTCTTTCTCATTTTCATGTACAGTATGTTACGTTTTACGGTGGAGAAGCGCGCCCTTCTGTGCTCGGGTTTTCTTGAGGAAGAAATTATCCTTTCTAGGATGCTACAGAATTTGAATACAGCAGTCCCTGAAGGGATTTAGGTACCACGGTTGTACTTGCTTAGACCAATCTGTGTGTGTTTTGTAGTACTTTGCAGCATTTTTTGTTTGCAGTATGTGACCCTCATTGTGTAGTCACACCTCGCATTGCCTGCCCATGTCATTAGCGTTGAAACTAACGCCTAAACTACACAAACCAACAAAGATATATTGGTCTGGAAGGGTTGAAGAATAGAAGCTAGAAAGACAGAAGGAATTTAGAATTTGTAAAACGTTGGGATGAATGTAACAGCTGTGGGCTCAATTTTCAGAAGAACAAGTGTTAGGGCAGAATGCAGATTTATGTAACCCAAAAAATATGATTATCAAACTACAAGATTTGTTGTTACCTAAACACCTCAGTTTTCATTGCCATAGTATTTATAAACAAATATATGGTTATCCAACCCATGGTGGCCCTACTGCATGTGTCACTGGCTCTCTCTCTCCATCTCTTTTGCTTTGTTCAGAGTCTCAGAGAGCTAGTTGTCCCATTTCCACCCAAATGTATAGAGTAGTCCAATGGTGGTATATACTTCTTCACTTTCTTCCACACCTATGTTTATCCATCCAATTTAACAATGTACTGTGTCATGTTCCTGTCTTTTTTCTTGTTTTTCATAGTACCAATGAATTAACTGGAGTAGTGGACAAAATAATCGTTGTTAAATTTATTACTTTGACACATATGTTTCTCATTCAGTATTTTTCTCCTGCTTTATGGTTTTAATAGTGGTGGATGCTAAAAGCTGAGGTCTGTTGGATAACAACGCTGCTTTCGTCCAAAATAAGCTACTAGAACATATGAATTTTTTAGACCATATTATAGTAAAAGTAATTACATTAATTATGTCAGTCATCAAAGAGATGTGGGCCGCTAGATTCTCCTGCTGGTTCCATTATATTAATTATTGCACTCCCAAATGGACTGAAATGCTATCTCATTTTTCTCAAATCGGAATCATCACAAAATATCAACTCAAGAGACAAAATATCAACACAAGAGATGATTGAGAGGAGAGGAAGGAGCGAGTGGGAGGCCACCACTGCCCCTCGTCGCCGAGCTGCCGTGGAGGTCCCGAGCTCGGGGCCAGATCCTGAGCCACCGCTCCATCGAGAAGATGCTGCGCCACTGAGGATCCACCGCGCAGCCGCTGTGCCGGGGAGCAGCTGACCCGCCAAGCGGCCAGGGAGCTGTCGACCTGCCATGTCGCCGGGAGCCATCGACCCACCGGATCTGGCGAGGAGCGGGGCGGCGGCACCCTGATGAGAAGGAAAGGGAGCGGTGAGATGCTGGTGGGGGAGCAACTCCCCCTGCCACCTCCCGCCCCCTCTCCCCCACTACCTCTAGTTGTGGCCGCAGCCGCTTCTCGCCCCACCGCAAAGCCGGCAGGTGAAGAAGCTAAGGAGGAAGCCCTCCCGGCCGTCATTGGCCCTAGCGCCGGCGGCAAAGTGACTGGGGAGGATTGGTCGCGGTGGAGCACATCCTCACCTCTCCCGGCCATGGTGGCTGCCGTCGTTGGCGAGCCTCTCGAGAGGAGGAGGTGCGCATGAACGGAGAGTAGGAGGATGGACGTAGCAGGGAGGGGGAGGGAAGAGCCGGATTGAGAAGGGGGAGGAAGATGCGAGAAAGAGAGAGAACGACGGAGAAAACGAGAATAGGAGAGAAAGAACGACAAAGGGGATCGATATGAGGGATCCCTCGATCTGATCCGATCTGGTGACCTTATCTGGACTTAGTTTTTTACTATGAAAAAACCGACCGGTCTATTTTAAAGAAAAACATGAAAACCGAATAAGTGAACCAACTGGTGAGGCCATAAATTTTGCAAAAGCACCACTCATCTTTTAAATTTTAGAGCGCAGTCCAATTTTTGCAATTTCTTCTCCCCCAAATATACCTATATACCAAATTAAAAAATTTAGGTCCTTATCTATATATATCTCTATCTCTACTACTTAAAAAATTGAAAACGTTTCCGTCATCCGCAATAGCGAGAAAAGGGCGAAAAAAACATGAAAAAAAAGGAAAGTCCGATTCAATCTATCTAAAATTTTCCACCGCACGTGCGATCGATCCCGCTTCAATCCTTCTCTGATGGCAAAAAATGAGTCTGCATCAAATTCAAGAACACAAGAAAACACTAAGAAAACGCTGACGCCGAAAGGGGAGGGTGCCGCCGAACCGCCACCGCCATTGCAGGGATGTCGGGCCGCCGGCTGCTCCCCTCCCACTGGATCCGGTGGAAGGGGCCGCTGGGACGCTGGGCCGCCACCACCTCCCCTCCTGGATCCATCGGAGGGGAAAGCGCCGCCCGCCACCGTCGAGCCCTCCCGCGGCCCCATGGCGAGGGAGAGGAGGTGAGGGTGGAGAGGCGCCGCTGCCCGCGGAAGGAGAGCCGCCTCCCCTCCCTTTAGATCCGGCGGAGGTGAGGGAGCTGCCCCTGCCTGCCGTCTCCCTCCCATCGGAAGGGAGGGCGCAGCCCCTACCTGCCGCCTCCATCTCCCGCCGGAAGGGAAGAGGGGGAGATAGAGCGGTGCCGCCGGTGGGGTTGGGAGAGGAGGAGAGGCGGAGGGGGAGAGGCGCCGCCGCCACCGTTGAGAGAGAAGGGGGAGGGGAAATGTTTTTAGGGTTAGGGTTGGGCTGTTGAACTTTTATATAGGTCGGGATCAATCAGGACCGTCCATCAGATCGTATGGCTACAGCTTCTCCCGCGTCGGGCCAAATGCCACTCCCAGGCCGCCACACGGAATAAGTTCACTTTAGGTCCCTTAAGTTGTCCCGATTCTATTCCTAGGCCGCCCACACTATTGGGCCGCCTCATGGACCGCGTTTACGCTCCGTATGAAATAAGTTCACTTTAGGTCCCTTTAGTTGAACTTTTTTTATTTCATTCATTTTGATCTAGAGAAATGAATATTGCTGCCTTATTTCTCGTGTTTCATAGTAGGGGGGCAGAGGGATAGTTAGGGCTTGAGCCCTATGCCTTGCTCCATAATCCCCATTATAATCTTATGAAAATGCTCGAAAATGCTCTGTAATTTGTGATAATATTTGAGCTCCTGTTAGCTGAACGCATGAAGATTTTCTGGCTCCACCAGTAGCAATGAATTTAAGTGGACATGAACAACCATTGTTAAATTTGATGCCTATGTTTCTCATTCAGTCCTTTTCTCTTATATTTTATGGTTGGAATAGTGATGGATGCCTAAAGCTGGGCCTTTCTGAATATCAACACTGTTCTCTTTCAAAATAAGCCACAAGAACATATGAATTCTTTTACACAATTTATAAGTAAAATCAATTAAATTAATTATGTCAGTAACAAACATTTTGTCGGTATGCTGTAACAACATTTTTTTTGTCGGTTATAGGAATGTAACATTTTTTTTCCCTTGCAGATCTTCCCTTGCATTCCTATAACAAGCTGGATTTTGTCGGTATGCTGTAACAACATTTTTTTTCCCTTGCAGATCTTCCGCTTTTGCCGGTCAAAATGCCATAAAAATTTTAAGATGAAGAGGAATCCTCGTAAGGTTAAATGGACAAAAGCATACAGATGCTTGCATGGGAAGGACATGACGCAGGTATTTGCTTGTTCTATTTTCGTTCAGTATTAAGTAGAGAGCACATTTTCTATGCTGTGAACCACTTTCTATGCTGTGAACCACATCTGAATCGTTTGAAATCAGGACTCCACCTTTGAGTTTGAGAGGAAGAGGAACAGACCAGAGCGCTATGACCGGAATGTCACTGCACAAACTCTTAAGGCTATCCCTCTTATTACAAAGATTAGACATGAACGCCATAAGAAACATATTACAGAGAGGTTGGCATCTGTTCTTTTGGCTCAGTCTGTTAATTCTTGAAATTATCTCTTTGCTTAACATATGCACTGAACTTTTAACAGGCAAAAACAGGGTAAGACAAAGCAAAGGGAGAGAGATGCTAAGGAGTTGGAACAGGATATTCAAATGCTCCCGAAGAAGGATACCATGCTGTCAACACAAAAGACAAAGGTCGTGGTCAAAGTTTCTCAGCAGCAGACCGAAGAAAATCTTATGGAAGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001536