BGIOSGA001542

From RiceWiki
Revision as of 10:22, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001542| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001542, complete gene.| tag = OS01G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001542

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001542, complete gene.

LocusTag

OS01G0511600

Ensembl Transcript ID

BGIOSGA001542-TA

Ensembl Protein ID

BGIOSGA001542-PA

Length

3087

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:19994432..19997518

Sequence Coding Region

19997234..19997518,19996820..19997135,19995924..19996185,19995692..19995807,19995507..19995616
,19995175..19995352,19994903..19995032,19994432..19994582

Genome Context

<gbrowseImage1> name=IndicaChromosome01:19994432..19997518 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:19994432..19997518 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGCGACCTCATCATCATCCTCCCCCTGCATGATTGCCTCGCTACGCAGCAGCCATCGCTGCCGCCTTTCGCCCTCCGCCACCGCCACGTCGCCGCCCCGCCTCCGCACGCTTCCTCCCCGCCGATGCCGACGCAACCCCTCCTCCTCCCGCCAAGCGGCGGCAATCTCCATGGCTCCCGCCAATCCTCGCCACCGCCTCATCGCCCCGATCCACGCCGCCGCCGCCGCCGGAGGAGGAGGAGGAGGCGCGGGCGCCACCTCTCCCTCGGGCCTACCCAGCCTCGTCGGGATCGCGCACCTGCTGGTGTCGCTGGGGATCGTGCTTGCCTCCGACAAGTTCCTGAAGCAGGCGTTCGCGGCGGCGTCCATCAAGTTCCCCAGCGCCCTCTTCGGCATGTTCTGCGTCTTCTCCGTCCTCGTCGTCCTCGACGCCTTCGCGCCCGCGCTCGCCAAGGGGTTCATGGACTTCTTCGAGCCGGCCACCCTCTTCATCCAGAGGTGGCTGCCCCTCTTCTACGTCCCTTCCCTGGTCGTCCTGCCGCTCGCCGTCAGGGACGTCCCGGCTGCTTCCGGCCTCAAGATCTTCCTCATCATTTTTGGTGGCTGGTTTGCTTCACTCATGGTGGCCGGATACACAGCACTCACCGTGAGGAAGATTGTCCAGACACGGCTTATACCAGCTGAGCCGATGAGCAAGCCGTCTCCGTTCGCGACGCTGGAATTCTGGGCCTGGGGTGCTGTCTTTGTCGCATCGTTTGCTGTTGCTTATGTTAACCCCACAGCGCTTGGCACCACGGCAAGAACATGTCTTCCTTTCCTCCTCGCTTCAACTGTACTGGGATACATGGTTGGTTCTGGGTTACCATCTGGTGTCAAGAAAGTGCTTCACCCAATCATTTGTTGTGCACTCTCTGCAGATTTGGCAGCAATAGCATATGGGTATCTCTCCCGGTCTGGAGTTGATGCAGTGCTAGGTGATTACCTCACAAAGGCGCCATCTAATCCTGGAGCTGGTGACGTCCTGATGGGATTTCTTGGTTCAGTCATCATATCGTTTGCATTCTCAATGTTCAAGCAGAGAAAGCTTGTGAAGAGGCATGCAGCGGAAATTTTCACATCAATTGCCATCGCATCAACATTCTCGTTATACTCAACTGCCATCCTAGGACGGGTGATAGGGCTAGAGCCTTCACTGACCATATCAATATTACCGAGGTGCATAACCGTGGCGTTGGCTCTGAGCATCGTGTCTTTCTTTGAAGGTGTAAATTCTTCGCTAACCGCTGCGGTCGTCGTCCTCACCGGGCTGATCGGCGCAAATTTTGTGCAAGCAGCCATGGACAAGCTTGGCCTCAACGACCCCATCGCGCGAGGAATAGGGACGGCTTCCAGTGCTCATGGACTGGGAACAGCAGCGCTGTCGGCCAAGGAGCCTGAAGCGCTGCCCTTCTGCGCCATCGCTTACGGCCTGACGGGGATCTTCGGTTCGCTCATTTGCTCGGTTCCGGCCGTCAGGCAGAGCTTAGTGTTCATAGCTGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAATSSSSSPCMIASLRSSHRCRLSPSATATSPPRLRTLPPRRCRRNPSSSRQAAAISMAPANPRHRLIAPIHAAAAAGGGGGGAGATSPSGLPSLVGIAHLLVSLGIVLASDKFLKQAFAAASIKFPSALFGMFCVFSVLVVLDAFAPALAKGFMDFFEPATLFIQRWLPLFYVPSLVVLPLAVRDVPAASGLKIFLIIFGGWFASLMVAGYTALTVRKIVQTRLIPAEPMSKPSPFATLEFWAWGAVFVASFAVAYVNPTALGTTARTCLPFLLASTVLGYMVGSGLPSGVKKVLHPIICCALSADLAAIAYGYLSRSGVDAVLGDYLTKAPSNPGAGDVLMGFLGSVIISFAFSMFKQRKLVKRHAAEIFTSIAIASTFSLYSTAILGRVIGLEPSLTISILPRCITVALALSIVSFFEGVNSSLTAAVVVLTGLIGANFVQAAMDKLGLNDPIARGIGTASSAHGLGTAALSAKEPEALPFCAIAYGLTGIFGSLICSVPAVRQSLVFIAG</aaseq>

Gene Sequence

<dnaseqindica>1..285#384..699#1334..1595#1712..1827#1903..2012#2167..2344#2487..2616#2937..3087#ATGGCAGCGACCTCATCATCATCCTCCCCCTGCATGATTGCCTCGCTACGCAGCAGCCATCGCTGCCGCCTTTCGCCCTCCGCCACCGCCACGTCGCCGCCCCGCCTCCGCACGCTTCCTCCCCGCCGATGCCGACGCAACCCCTCCTCCTCCCGCCAAGCGGCGGCAATCTCCATGGCTCCCGCCAATCCTCGCCACCGCCTCATCGCCCCGATCCACGCCGCCGCCGCCGCCGGAGGAGGAGGAGGAGGCGCGGGCGCCACCTCTCCCTCGGGCCTACCCAGCGTGAGTCGTCAATCAGTCAAAATGCACGCAGCCTCGTCGCGATTTCGCATGACCTGCCGATCGAACTGACATGCGTGAGCTATGTATGGATTTTATAGCTCGTCGGGATCGCGCACCTGCTGGTGTCGCTGGGGATCGTGCTTGCCTCCGACAAGTTCCTGAAGCAGGCGTTCGCGGCGGCGTCCATCAAGTTCCCCAGCGCCCTCTTCGGCATGTTCTGCGTCTTCTCCGTCCTCGTCGTCCTCGACGCCTTCGCGCCCGCGCTCGCCAAGGGGTTCATGGACTTCTTCGAGCCGGCCACCCTCTTCATCCAGAGGTGGCTGCCCCTCTTCTACGTCCCTTCCCTGGTCGTCCTGCCGCTCGCCGTCAGGGACGTCCCGGCTGCTTCCGGCCTCAAGATCTTCCTCATCATTTGTATGCACATCACTACGCTCCTATCGTTGCATGCATTCTGCTACTTCTTTCTTCCTCCTGATCATCGTGCTTATCTGCTCCGCCTCTGCTTCCTCCGGATTTTACATTCTACTACTTCGTATTTGATATGCTGATCAATTAACTTGCAGTAAATATTACCACACCAACTTGCATTGTGGATTGGCCCCATTCATAAATCACAACAATTTTACTTAGAGGGTGTTTAGATTCAGGGGTGTAAAGTTTTACCGTGTCACATCGGATATTATATAGGGTGTCGTAATAGGGTGTTCGGACACTAATAAAAAAAACTAATTACAGAATCCAGCAGTAAACTGCGAGACGAATTTATTAAGTCTAATTAATCCGTCATTAGCAAATGTTTATTGTAAAACCACATTGTCAAATCATGGAGTAATTAGACTTAAAAGATTCGTCTCGCAAATTAGTGGCAATCTGTGTAATTAGTTATTTTTTTAGCCTATATTTAATACTTCGTGCAAGTGTTAAAACGTTCGATGTGAAAGGGTGTAAAATTTTAGGGTGGGATCTAAACATGCCCTTGGTTTCAGATTAATTTGCATTCGATCTGAAAAAACCGATGGTGTGATGTTATCTGGTTTTCATTTCCCAGTTGGTGGCTGGTTTGCTTCACTCATGGTGGCCGGATACACAGCACTCACCGTGAGGAAGATTGTCCAGACACGGCTTATACCAGCTGAGCCGATGAGCAAGCCGTCTCCGTTCGCGACGCTGGAATTCTGGGCCTGGGGTGCTGTCTTTGTCGCATCGTTTGCTGTTGCTTATGTTAACCCCACAGCGCTTGGCACCACGGCAAGAACATGTCTTCCTTTCCTCCTCGCTTCAACTGTACTGGGATACATGGTTGGTTCTGGGTAAATACATATGCTTTTTGTATACACTTAATCTGTAAGATCTGACGAAGCCACCAGCTGCCTTGTTTACTCCATTTCTCTAACAACATACATGGGTCTTATTGATTACTTGGCAGGTTACCATCTGGTGTCAAGAAAGTGCTTCACCCAATCATTTGTTGTGCACTCTCTGCAGATTTGGCAGCAATAGCATATGGGTATCTCTCCCGGTCTGGAGTTGATGCAGTGCTAGGTTGTAAACTAAACCCTGATCAATAGTGCTCTAATCAAGTTGTGAATTCTGAAATAAGTTGGTTTTAATTGCCAGGTGATTACCTCACAAAGGCGCCATCTAATCCTGGAGCTGGTGACGTCCTGATGGGATTTCTTGGTTCAGTCATCATATCGTTTGCATTCTCAATGTTCAAGCAGAGAAAGGTAGTGCTTGCTGCTGTTTCTGCAGAATTATTCTCAGTTAGCATGCATGGTTATGGTGTGAGATGATTCATATATATCCTGAGGCTCTGTGTTTGTTGTTGCTGGTGTGTGTTGGCTAATCAACTAATAATGTTTTGCGGTGGGTAAAACTCAGCTTGTGAAGAGGCATGCAGCGGAAATTTTCACATCAATTGCCATCGCATCAACATTCTCGTTATACTCAACTGCCATCCTAGGACGGGTGATAGGGCTAGAGCCTTCACTGACCATATCAATATTACCGAGGTGCATAACCGTGGCGTTGGCTCTGAGCATCGTGTCTTTCTTTGAAGGTACGGACCTAGTACATACTTATATTGCTGGAAATCAATTTCTGTTCTTGCTGGTCGATCAGCTAGATATATAATATGGAGTACTCAGCTAGCTTATTATATATGGTATGGATGACTTAGTTTGTGTGTCCCGGGCATGCAGGTGTAAATTCTTCGCTAACCGCTGCGGTCGTCGTCCTCACCGGGCTGATCGGCGCAAATTTTGTGCAAGCAGCCATGGACAAGCTTGGCCTCAACGACCCCATCGCGCGAGGAATAGGGACGGCTTCCAGGTACATATATACCTTTGAGTTTTACTTTTGAGATTTGTTCCGGTCCAACAAAAAGTATTTCGAGATACCGATACCTCACGGGTTCACAGTATCAAATCGTTTCCGATTGTTAGATCTAACAATGTCCATTCTACACAACTAGATCCAATGGTCAGAAACGATTTAGATCCAATGATCGAAAATAATTTGGTATACCACGAGATAGCAAATTTCTTTACTTTTACCTACCTGCTGGCTGCTTTTTTTAGTAAGTTAAGCTGCATATATATACATACATACAGCAGTATGCTCTATGAATAATGTTTGCATTTACGTTGCAGTGCTCATGGACTGGGAACAGCAGCGCTGTCGGCCAAGGAGCCTGAAGCGCTGCCCTTCTGCGCCATCGCTTACGGCCTGACGGGGATCTTCGGTTCGCTCATTTGCTCGGTTCCGGCCGTCAGGCAGAGCTTAGTGTTCATAGCTGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001542