BGIOSGA001547

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Revision as of 10:22, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001547| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001547, complete gene.| tag = P0520B0...")
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Gene Name

BGIOSGA001547

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001547, complete gene.

LocusTag

P0520B06.21

Ensembl Transcript ID

BGIOSGA001547-TA

Ensembl Protein ID

BGIOSGA001547-PA

Length

6986

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:19936265..19943250

Sequence Coding Region

19943245..19943250,19942008..19942094,19940514..19940615,19940309..19940417,19939685..19939791
,19939475..19939612,19939305..19939400,19939060..19939184,19937188..19937320
,19936990..19937115,19936799..19936910,19936265..19936629

Genome Context

<gbrowseImage1> name=IndicaChromosome01:19936265..19943250 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:19936265..19943250 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGGAGGCCATCAAGTGTATGCGGCATGCAAAGAGGACAGTCCTGACTGCCGATGATGTTGATAGTGCTCTCAGCCTCAGGAATGTTGAGCCTGTATATGGATTTGCTTCCGGTGACCCCTTGCGGTTTAAGAGAGCTGTGGGACACAAGGATCTCTTCTATATTGATGACAGGGAGGTAGACTTCAAAGAGATTATTGAGGCCCCTCTACCTAAAGCTCCTCTTGATACAGCAGTTGTAGCTCACTGGCTAGCCATTGAGGGAGTCCAGCCTGCAATTCCAGAGAATCCTCCTGTAGATGCTATCGTAGCACCAACAGAGAATAAAAGGACAGAGCATGGGAAAGATGATGGACTTCCTGTTGACATCAAGCTTCCTGTTAAGCATGTGTTATCTAGAGAACTCCAGATGTATTTTGATAAAATAGCAGAGCTTACAATGAGTAGATCTGAAACCTCAGTTTTTAGAGAAGCATTAGTGAGCTTATCAAGAGACTCAGGCCTTCATCCGTTGGTTCCTTACTTTTCCTACTTCATCGCCGATGAGGTTACCCGGAGTTTAGGTGATCTTCCTGTTTTATTTGCTCTCATGCGTGTAGTCCAAAGCCTCCTACACAATCCCCACATTCATATTGAACCATATTTGCATCAGTTGATGCCGTCAATTATCACCTGCATGGTTGCGAAAAGGCTTGGGCATAGGCTTTCAGACAACCATTGGGAGCTTAGAGACTTCTCTGCTAATTTGGTTGGTTCAGTATGTCGAAGGTTTGGTCATGCGTATCACAACATCCAAACCCGGGTGACAAGGACGTTGGTCCAGGGATTTCTTGATCCTCAGAAATCATTGACACAACACTATGGTGCGATTCAAGGGATATCTGCATTGGGGCCCAGTGCAATTAGGCTTCTGCTTTTGCCCAACCTCGAGACATACATGCAGCTTTTAGAGCCGGAATTACAACTTGATAAGCAGAAAAATGAGATGAAAAGAAAGGAAGCATGGCGTGTTTATGGTGCCCTGCTGTGTGCTGCAGGAAAATGCTTATATGATCGGCTCAAGTTGTTTCCTAATTTGCTTTCTCCATCAACACGGCCTCTTTTGAGGAGTAATAAGAGAGTCGTGACTAACAACCCAAATAAACGGAAGTCTAGTACAGATCTCTCCACATCCCAGCCACCTCTGAAGAAGATGACAACAGATGGTGCGATGAATTCTATGACTTCAGCTCCCATGCCAGGAACCATGGATGGCTTCTCCACCCAATTACCCAACCCTAGCATGACGCAAACTTCATCCTCTGGGCAATTGGTGGAAAGCACCGCATCAGGTGTGATTCGGAGGGATCAGGGAAGCAACCACACGCAAAGAGTTTCCACAGTGCTGAGGCTAGCCTGGAAGGAGGACCAAAATGCTGGGCATCTGTTGAGTTCATTGTACGAGGTATTCGGTGAAGCCATCTTCTCCTTTGTTCAACCACCAGAGATATCGTTCTTTTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MQEAIKCMRHAKRTVLTADDVDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAVVAHWLAIEGVQPAIPENPPVDAIVAPTENKRTEHGKDDGLPVDIKLPVKHVLSRELQMYFDKIAELTMSRSETSVFREALVSLSRDSGLHPLVPYFSYFIADEVTRSLGDLPVLFALMRVVQSLLHNPHIHIEPYLHQLMPSIITCMVAKRLGHRLSDNHWELRDFSANLVGSVCRRFGHAYHNIQTRVTRTLVQGFLDPQKSLTQHYGAIQGISALGPSAIRLLLLPNLETYMQLLEPELQLDKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPNLLSPSTRPLLRSNKRVVTNNPNKRKSSTDLSTSQPPLKKMTTDGAMNSMTSAPMPGTMDGFSTQLPNPSMTQTSSSGQLVESTASGVIRRDQGSNHTQRVSTVLRLAWKEDQNAGHLLSSLYEVFGEAIFSFVQPPEISFFL</aaseq>

Gene Sequence

<dnaseqindica>1..6#1157..1243#2636..2737#2834..2942#3460..3566#3639..3776#3851..3946#4067..4191#5931..6063#6136..6261#6341..6452#6622..6986#ATGCAGGTCCGTCCCCCCCGCGCTCCCGAATCTCTCGCTTCCCTTCGGTTTTAGTTTCGTGCACTTTGGGGGACTAGGAGGCAACTTCCACCATTCCCTTCGTAGGAAAATTGCCTGCCCCCCCGAGGCGTGGATTTGTAGTTTCTGGGTGATTTGGGACCGCAGGGAGCAATTGCTTGCTCTTTGTTCTTCGTTCTCTCAATTGATTGCTATGCTCAACCATTGTGCTAAGTTGTGTGGTGGAATATTTGCGATAGACCTATTCCAATGGGTTTTGAGTTTGCTGGACGAGATGCGTTTCCATCTTGTTGTTTGAACATGCTGGTTCACACTGACTGCTTAACTGTGTCCTGCTCAATATATGTTCACTGGGTTTTTGTAGCAATGCAATATATTGGACGGTCTTCATAGCAATGCAATATATTGGACGGTCTTCATAGCAATGCAATATATTGGACGGAAGATGGTTGTTTTTTTTGTTCACTATTGTCTCTTCAAAAGCATTGAAGCACACCATTACAGAGTTTCTGGACTGTTCAATCTTCTCTCATTCGATTGCATGCTATAGCTTACTGGTAACATATGTTGGGGTTTTGTTCCTGTTTTATCACCATTTTTTTTAATTTGTATATATTTAGTGAGGTAGTGAGTCTAAGAATTTGCGTTCTATCCACTATTTACACGATAAATTCATCATTTGAGGTTTTCTTTACTGAATCTTGGAAATATGTTATTCCTATCTGATCTTTACTCATAAAGTTTGGAAAACTATCATTGACAAACTACAGAGTTGTCACAAAAAATACAAATTTAACACTGCATTACCAGAAAAATACATATTTGAGCCATATCACACAATTATCGATTTAGCACCGATTTTATCATGAAACTACAAATTTTACAGGTTTCATCTATCGTGATGAACTTTTCATAAATTGTAGTTTTCTCATAAAGTCCGTGCTTTATCTGTAGATCTATAATCTCGTTGCTTAAGTTATAAATTTGGTGTTACATCTGTTGTTTTGCGATAATTTTCTGGAAGTATATGTTGATCTGCAAAATTTGTATGTAAGCATATAAATATTCAGTCACAGAAATGCCATTCCATTTTCTCCTAGGCACTATATGTATTTTATTATGCTGTGGATTGTGACAGGAGGCCATCAAGTGTATGCGGCATGCAAAGAGGACAGTCCTGACTGCCGATGATGTTGATAGTGCTCTCAGCCTCAGGAATGTTGAGGTAGTTTCTATTTCGTTGACAATATTTTTTAGGACTACTAAATAAAGGTTTTGTAGATCTAGTAACTGTTGTATGCTTGAATGCATCAAACTTCTGAGTTGGATAGCTAAATAGTCGAGCTCAGTATTTCTCGGAATCAGCTCATTATTAAGCTAAAAGTATAAATGTTTAAGAAACTTAGAGTTGACGATCTTTTCATGGAGACATGTTAGCCATAAATAAGGCAAAATCTATGCCTGTATCTGTTTTTGGTATGTCTGTTCCCTGACATATAAATGCCATTGCAATCATCTCTTGTTTGAAAACTGATACTGCAATTGGTAGAGGCTTTTGGTGTCTGGGTGTATTCGGTGGTTTCTTCCCCTCTCTTCTTCTTTAATACAAATATACAATCCTTCTGTTCCATTTGAGAACACAGCTCTCCTGTGTGTTCGAGAAAACAAATAATGTCTTTAAAGCTTGACATGTAATTCCTCAAGGGAACAGCTGAACTGAGCATAGGGGAGAAACCATATCCTTCCATTCAGCCCCCTATTTCTCTGACACCCACTAGTTGTGAGGTTACTGCAGTCCAGTAGGATGCTGATTTTACTTTGCGTGGAACTGAATGAGAGAAAGCTGAATAAGTAGGATGAAGCCCAATAGTGTACGCTGGGTAAGATGGGGGAAATAATCCATGTGAAAATACAAAATAAAATATGAGATATGTATTCATGTCAAATGGGGTGTGCTAAGCTAAATGCACTTTATGTTAGAATTTGATGATTATGTTTTTTGTTTCAAATCAAGGACTGAGAACTATGTATTAAACATTGCCAATGTGTTTATATGCTGTTGTATATGACTTCGTATGTAAAAGTTTCCTACTTTGCTTACAAGTAACATAATGCCTCTTTGCCACGCTCAATGTTAGAACTGGGAAAATGTGAAACTGTTTTTCTTTTAATTTCAGATTAAGAACTGAGAAGTATATATTAAACATTGCCAATGTGTTTATATGTTTTGTATGACTCCATATATAGGCGTTTCCTCCTTTTTTGAGTAACATAATGTCCTTTTTGGCACTCTCAATATTATCACTGGGTTGGTTTAGCGTGCTAGGTTGGTTTCTTTGATGTTACTTTTGCTACATATTTTCGTTATTTTGGTTAAAATGTTACTGTAGTGGAGTTTAGGTGGGACATGATTGCCTTCAGTGTCTAAGACACAAGCTAAAAATAATAGCATTGTATTGGATCATAATCTATTACCACAAAAACTGATGCATATGCAGCACCGCTGGTAGGAAATTTGTTGACATTAGTTTTTATGGTGGTTCTATGTTATGGTGAAGTTGGCATTAAAAAGTATTGTTTCAGTGCATTTATTTAATTGCTTTGAATTTTCACACAGCCTGTATATGGATTTGCTTCCGGTGACCCCTTGCGGTTTAAGAGAGCTGTGGGACACAAGGATCTCTTCTATATTGATGACAGGGAGGTAGACTTCAAAGAGGTAGGGGCTCTACTAATGGATGAATCAAATAACTTTTGTACTTATTTTATTATAGGGATCAATTTGAAAATTTTCTTATTCATTGGCTCTGTGCAGATTATTGAGGCCCCTCTACCTAAAGCTCCTCTTGATACAGCAGTTGTAGCTCACTGGCTAGCCATTGAGGGAGTCCAGCCTGCAATTCCAGAGAATCCTCCTGTAGATGGTTAGCTCATATATCTTATCTTATTTTACTCTTTAAAAGAGGGAGTTGGGGGGTTATGCTAGGTTCTACACCCACCCCCACGCTGATCTTTTGTGGCTGTAAATATGTAGGTATGTGTTATTCGTGAGATTTTTATAGAAAAATATTGAATCTTTGAATATGAGTATACGAGGTGGTTAGTTGGTGTTCAATTGGAGGATAATTAATTACCTGTTGCATTTTATATTCTAGAACTAACATTTAGTTAGGATATTTGGATCCATTCCAACACAAATACCTTCTAGTTATCTGTATATGGATTTGCTTCCGGTGACCCCTTGCGGTTTAAGTTATCTTCACAAAACTTACATCATATTGTTACCTGCTTTATGTATACAATGTTCCTTGGGTGAGGAAGAGATTAGTTGTGGGATCTATTAACAGACCTTAGTGTGATTAAATCCGTGTTTATAATGTTCCTTGCTTGTTCATTATTTGTAGATTTTGGTATTATCTGACAATTAGTGTTTCACTTCAGCTATCGTAGCACCAACAGAGAATAAAAGGACAGAGCATGGGAAAGATGATGGACTTCCTGTTGACATCAAGCTTCCTGTTAAGCATGTGTTATCTAGAGAACTCCAGGTATTGTGGTTACTGTATATTGTTAGAGCCTTACATAAGATTTATATTCTTCTTTACTGGTTTCGTTTGCAGATGTATTTTGATAAAATAGCAGAGCTTACAATGAGTAGATCTGAAACCTCAGTTTTTAGAGAAGCATTAGTGAGCTTATCAAGAGACTCAGGCCTTCATCCGTTGGTTCCTTACTTTTCCTACTTCATCGCCGATGAGGTTGTTATCTTGCTCTTAGAGTCTATATTGTGCGAGCTGGCATTGCCTTACAATGTATATCCTTATAATTTCAGGTTACCCGGAGTTTAGGTGATCTTCCTGTTTTATTTGCTCTCATGCGTGTAGTCCAAAGCCTCCTACACAATCCCCACATTCATATTGAACCATATGTAAGTGGTTGATCAGTCAACTTTGATGCTTCTACTTTCTAGTTGTTTTGTTTTTAGCATTGCACACTTATGTTTGCAGCATATTTCTGCTAAAGAAACAAAATTTCTCTTGATTGCCAGTTGCATCAGTTGATGCCGTCAATTATCACCTGCATGGTTGCGAAAAGGCTTGGGCATAGGCTTTCAGACAACCATTGGGAGCTTAGAGACTTCTCTGCTAATTTGGTTGGTTCAGTATGTCGAAGGTGAGTGAACACGAAGAGTAACTACTCAAATACCTATGCATCGCAATGGGCTTCAAATAGACATATAATAAGTAATAAAAAATATGAAAAAGGCGTATATATTTCGTGAATTAATCTTGTTACAAGCCATACAAGCGAATGATCAAATAGTCCACAGAATATGAAAATATCCCACTAACTCAGGATGTTACCACTACTAGGTTCAAAAATATATATCATAAATTTTAAATTTTTAGAAGTTTTAAAGCTGCATGCACAAGGATCTACTTGTAGAGAAACTCAACTGGAGAAGGACGAGAAGAAAGACTTGAGTAGCTTCTTTTATCAGATAGTAATATGTGCTATCTAACCTCATTCTACTCAGATCCAAGAATGTTATCAGAATCTAATCTGTTCTTGATGGTTACAGTTTCTAGACATAATCTTTAGAATCATTTCCACACCATTATCATAGTTCTTCATTTCTTCTATTCCCTCCATTCTCTTATACATGACATTTGTTATTTCATTTTTGGATGAATGGTGTACGGACTCTCTGCACTGACTTCTGGATGAATGGGAAGTCAATAGTGGTTTGACCTCCATTTCCTACTGTGTCAGTTATTTATTTCTAGGATAAGTCCATTTTATCCCCCTCGATTCTTGCCTTTGTAACACACCCCCAAACTTCCAATACCATACAATTTACCCGCTTGGAAATTCGGGGGGGGGGGGGGGGGGGGGGTTGCAAAATACCTGGTTTTGAAGTTCAGTGGTGTGTTTTAGACAAAGGCAAGTAGAATGGACTTATCCCTTTATTTCTTGGCGAGACAAGAACAATTACCATCAGTTATGGAACCGTTTCCTCACTTGCATAATTCTACTAATAAATAGAATGTTAGGTAGTATTTGTTTTATGTTACATTGATTTTTGCATTTTTCTAGGCCATGTAGACTAAAAGCTCCACGCTTTATCTCGATGCATATATTTAGTTGGCGGTGACTTTGTCTCATGTGAAGTCCCCTTAGAGAAACGATAGGGGAGAACCCCACTTAGAAATATAGCATACAGTAGATAATAAAGCACAAAAAATTTCAAGACCCAACAAGAACAAGGTCTACAAGATCATAAAAGCTAGGAAACTGGACACTGGAGAGTGTTAATACAGATGGAAACTAATAACCATACATATTTCCATGTGGGGCAGGAACTTGCTTGAGGCTTATTCCTTACGGATTTACTATGTGTGATAGCACCTCTTCTTAGATTTATGTTTAGTTGGAGGAGCTTTGTCACAATTACTAGGGGTGGGCGTTCGGTTTCCTCGGTTTAATTGGATCGGGTTTTTCGGGTTGCTTGGAATTCGGTTTTCGTAAAATGTAAACCGAAGGAAGTTCTAGAAAAATATCAACCGAGCAAAATAAACCGAAGAAGATCGGTTCGGTTTTTTCGGGGTTCAGTTTTTACCGAGAAAGATCTATGCCACACACCGCGGTTGACTTCACGCGAGTACGCACGGCCTGCCCAGCTTTGCCCGAGGGCGTGTGCTTGATTTGGAGAGGGAACAGGATTTGTGGATCTATTAGCTGTCATGTATTTGAGTGCTTATGTTAACACACTTCTGTTATGAAGTCCCTGCGAATGGTTGAACATTACTTAAGTTGCTCTGTGGCTAGAGGTTAATTGGTTTCTGCTGCTTGTGCTGATTGATTGCCTTTTGATGTTGCTTTCATTGAAATACAAACATTTCTTTTTGTAGGTTTGGTCATGCGTATCACAACATCCAAACCCGGGTGACAAGGACGTTGGTCCAGGGATTTCTTGATCCTCAGAAATCATTGACACAACACTATGGTGCGATTCAAGGGATATCTGCATTGGGGCCCAGTGCAGTAAGTCCTGTTCAAGCTAATCTAATTTTATATTTCAGCAAAATTTTGCTCACAATTTTTGTTCTTTACCAGATTAGGCTTCTGCTTTTGCCCAACCTCGAGACATACATGCAGCTTTTAGAGCCGGAATTACAACTTGATAAGCAGAAAAATGAGATGAAAAGAAAGGAAGCATGGCGTGTTTATGGTGCCCTGCTGGTTAGATTACAAGCTTTCAATGAATACATGTTATCTATTTTTATGCACCAGCTTCTTACCTGTGGAATGCATTTTTCAGTGTGCTGCAGGAAAATGCTTATATGATCGGCTCAAGTTGTTTCCTAATTTGCTTTCTCCATCAACACGGCCTCTTTTGAGGAGTAATAAGAGAGTCGTGACTAACAACCCAAGTAAGTTGGTACTTCTATATAATATATGTGTTGCTACTTGCTTGGCAACGCACAACAAATAAAAATGGTTATTTTATCGGCTGAACAATTTCTTCTCAGATACATAATACTGCAAAATGTTGAAATTATTAAGGTGTGAAAGTAAGGCTATGGTCAATTCAAATTTCAGATAAACGGAAGTCTAGTACAGATCTCTCCACATCCCAGCCACCTCTGAAGAAGATGACAACAGATGGTGCGATGAATTCTATGACTTCAGCTCCCATGCCAGGAACCATGGATGGCTTCTCCACCCAATTACCCAACCCTAGCATGACGCAAACTTCATCCTCTGGGCAATTGGTGGAAAGCACCGCATCAGGTGTGATTCGGAGGGATCAGGGAAGCAACCACACGCAAAGAGTTTCCACAGTGCTGAGGCTAGCCTGGAAGGAGGACCAAAATGCTGGGCATCTGTTGAGTTCATTGTACGAGGTATTCGGTGAAGCCATCTTCTCCTTTGTTCAACCACCAGAGATATCGTTCTTTTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001547

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA001547&oldid=39271"