BGIOSGA001609

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Revision as of 10:23, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001609| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001609, complete gene.| tag = OsI_020...")
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Gene Name

BGIOSGA001609

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001609, complete gene.

LocusTag

OsI_02002

Ensembl Transcript ID

BGIOSGA001609-TA

Ensembl Protein ID

BGIOSGA001609-PA

Length

5713

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:17430224..17435936

Sequence Coding Region

17435785..17435936,17433327..17433408,17433096..17433236,17432748..17432914,17430940..17431201
,17430485..17430860,17430359..17430400,17430224..17430285

Genome Context

<gbrowseImage1> name=IndicaChromosome01:17430224..17435936 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:17430224..17435936 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATCTACACTGCGATAGACACGTTCTACCTGACGGACGAGCAGCTGCGGGACTCGCCGTCGAGGAAGGATGGGATCGACGAGGCCACCGAGACCGCCCTCCGCGTCTACGGCTGCGACCTCATCCAGGAGAGCGGCATCCTCCTCAAGCTACCACAAGCAGTGATGGCCACAGCACAAGTATTGTTTCATCGTTTTTACTGCAAGAAATCATTTGTTCGGTTTAGCGTTAAGAGAGTTGCTGCAAGCTGTGTTTGGCTGGCAGGGAAGTTGGAGGAGAGTCCAAGGAGATCAAAGCATATAATCATTGTCTTCCATAGAATGGAATGTAGGAGAGAGAACGTACCAATAGAACACTTAGATGTGTTATCAAAGAAATACTCAGACTTGAAGCATGATCTGGTAAGGACAGAACGCCATCTACTGAAAGAGATGGGGTTTATTTGCCATGTAGAGCACCCTCATAAGTTCATATCTAACTACCTTGCAACACTTGAAGCCCCCGAACTGACGCAAGAGGCATGGAACCTTGCCAACGATAGCTTGCGGACAACTTTATGTGTAAGATTCAAGAGTGAAGTTGTAGCATGTGGAGTTGTGTATGCTGCAGCAAGGAGGCATGGCGTGCCCCTCCCTGAAGATCCCCCCTGGTGGAATGTGTTTGATGCTGATGAGGCAGGAATTCAGGAAGTTTGCAGAGTTCTTGCTCATCTCTACAGCCTCCCCAAGTCACAATATATACAAGTGTATAAGGACAATGATTCCTTCACGCATAGGAGGACTTCTGATACAAATGCTTCAAAGGAAAGTCCTGCAACGACTGTTGCAAGCGATAAGGGTACCCCTGTACCGTCAAGTTCTAGCCAGGAAAAGGATGCACTGATTAAGGCAGAGTCAGACAATGTGAAAGAAAAATGTGACGATGATGGAAAGACATTGCCTTCTGAACCCAATGGTAAAGAAGGCCCTGCAGTGAATTTGAAGAGTGAGAAGTCAGAATCCAATGTTGATCGCTCTCGGGAAAGAGAAAGAGATAGATCAAGAGGGCGGGACCGTGATAGCAGGGGCAGGGACTCTGATCGTGATAGCAAGGGCAGGGACTCCGATCGGGAGAGGGAGCGTGACAGAGAAGCAGACAGGGATAGGCAGCGGAGACACCATTCTAAGGACAGAAGTTCAGGATACTCTGACAAAGAGAAGTCAAGGCACCGCTCATCAAGAGATCGTGGTGATCACTACAGTTCGCACTCATCTCGTGACAAAGATCGGCACAGGCGGCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MIYTAIDTFYLTDEQLRDSPSRKDGIDEATETALRVYGCDLIQESGILLKLPQAVMATAQVLFHRFYCKKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECRRENVPIEHLDVLSKKYSDLKHDLVRTERHLLKEMGFICHVEHPHKFISNYLATLEAPELTQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRHGVPLPEDPPWWNVFDADEAGIQEVCRVLAHLYSLPKSQYIQVYKDNDSFTHRRTSDTNASKESPATTVASDKGTPVPSSSSQEKDALIKAESDNVKEKCDDDGKTLPSEPNGKEGPAVNLKSEKSESNVDRSRERERDRSRGRDRDSRGRDSDRDSKGRDSDRERERDREADRDRQRRHHSKDRSSGYSDKEKSRHRSSRDRGDHYSSHSSRDKDRHRRQ</aaseq>

Gene Sequence

<dnaseqindica>1..152#2529..2610#2701..2841#3023..3189#4736..4997#5077..5452#5537..5578#5652..5713#ATGATCTACACTGCGATAGACACGTTCTACCTGACGGACGAGCAGCTGCGGGACTCGCCGTCGAGGAAGGATGGGATCGACGAGGCCACCGAGACCGCCCTCCGCGTCTACGGCTGCGACCTCATCCAGGAGAGCGGCATCCTCCTCAAGCTGTATCCTTCTGCCCCTCCTCCCAGATCCCCCCACCTTTTCCCGCCTTGGTTCTTATGCCCAAGTCAAATCGTTAGGGGTCTCTCAAGCATGCTAGGGTTTCCAGCGGTTCTGTGATTACCATCCATGTTTACTAGCGCTCGCTAAATCTCAATTGATAGGGTTATTATTTGGTTTGCTTAGTTTTAGTTCGAACGTTGTGCTTCGGATTAGAGTTTTGGTTTTGTCAGATTAGAGATGTTTCTCTTTTATATTAGATTATCCAGCTAAACTAATGAAAATGTCAATGTTTTCTGTTTCTTTTCGGAGTCTTCTGTTTTTTCAATGTAGACCAATACATCATTTATTCAGTTTGATGTTCTCAAGAAGATTATCATTATATAAGGTTACACGCATCACTGAATCTTGATAATTTTGATTCTAATGAAAAAAAATGCAAATAAATGTGTTATGCTTCTTTGTTTATATGATATAGGAGAAAATGAGGATCTCTTGGGCTTACTTAAGGTGATAAGTTGTTCCAGGACGGTTGATAGTTGCCATTGCATTTTGTTTGTAGAATTTTGTCTTTTCATGCCATTCAGGTCATCTGTTTTTAACAAAGTTCACAAGCTTGAAATCTGTAAATTTTTGTTGGGCAAGGAATCAGGATGATATGGGTATTAATCAGTGTGCTACCCACATATATTAGGTTATGCACTGTTGCATGGTTTTTTCTGTTTAATGAAATATGATAGAAACAGTTGTCGGTTGCTGGGCTGAATGAAGCGGTACTTGTAGTAAATGGTGCTCGCTACACCATCTTATCTTCTGCCTTGCAGAGGTAAAATAAATTGGATGGAATTGATAGTTGATGTAAAATACATAAAATTTGTCTTCTCAAGCCATTCAGGTTATCAGATTTTCACAAAATGCACAAGCTTGAAATGTGTAAATTTTTATTGGGTCAGGACTCAGGATTATGTGGGTATGGATCAGTGTGTTTCCACATGTTTTAGGTATGCATTGCCTCATGATTTTTGCTGGTTAATGGAATATGATGGAAGCAGTAGGAGTTGGTTGCTAGGGTGAATGAAGTGATACTTAACTTGTAGTAAACGATGTTTGCAACGCCATCTTATCTTTTGCCTTGCAGAGGAAAAACAATTCGGATGAAAGAGAGAGTTGTTGCATATAGGCTACTTTATAAATTATATACTATAAGTAAAAACCTTTTTCTCATACTGGCCTATTTAGGAGAGGGAACAAATCTATAAGTCAAATAGTGGATGGATCACATGCGTGTCCATGTTTTTACATCGATTACAAACTTGAATATTCTCATATCTGAGGTTGAATTTAGATATCATCATTGTTTTAACATGAAATGATCCAAAATGCCAGAACATGAAATGTGCATCCTATGGAGTATTTGGGAAGCACTGAAAGTACACTCTGTGGAGTGGCAAAAATGTTTTTCACTCTGTTTTGTTAGACATGCCACATATATCTTCATTGCATTTTCTAGTTAAAATAGAAAAGAGCATAATACAACATGTCCAATGGAAAACATTAAACCATATTTGCATCTGTCAAATCTAGATGAGTGGCTTATGAATTGGTTAGCACAACAAAGAAACAACAGTTGTGGTCAAGCCACCATATTTGCATCCATTCTATTTCAGATGTCAAATAATTTAGTTAGTCAGATGTCCAACCAAACTAGGGGTGTCAATCGGATACGAATTATCTGTAGACTACACAATTCTTTAGGTTAAAATATGGTTTATTATTTCCATCGGTTAAATAGTTTTTCCCTCTATTTGATTGTGTATATGTGTTCTACATTTCCAAATAATGTTATCTGAGCTGTTTGTATTCAACAAACAATATACATATTTTATTGTAGTTTGCCTAACAGTTTTTCTTTTTATGTTTTTTCCCTGTTCACTCAATTTAATATAATTATTAGTTATGTTTTCTAAGAGGTTAAACGTCCTCAATATCATACTGCTACATAAATTACATGGATATTGAAATCCAACTGAATTACTTATGTGTTTGTTTCATATTTTTATTCATCACAACAATCAGTTCTCCTTTTTAGTCCGTGTGAGCGTATTTGAATATCTTTTGTTATGTGCTTAAAACATGAGCATGAATGTGTAAAGACCTTACTCGATTCTTATTAGATCTGTTGACATCCGTACCCCATACCGTATTTCATGTTGCCACAATTGATGTATCAAATCTTCAAAGATATCTAGTTGGGAGATAGTGATTTTCATAAGTTTCTATGTAGCTTGAATTTTGCTAGGCCCCATTCTTGCAACTTTTATTTTCTTTTCTTTCTTAAAAGTATAATATTTGCATGTGGTGGATTCCTTGACGCACCAAAGACCACAAGCAGTGATGGCCACAGCACAAGTATTGTTTCATCGTTTTTACTGCAAGAAATCATTTGTTCGGTTTAGCGTTAAGGTAAGCAAATCTTTTGTCTCAGTTACTCTGATCAAACCAGTCTTTGATTTTATGAGCGGAACCAATGAATATCTCTGTTTATGCTTGCAGAGAGTTGCTGCAAGCTGTGTTTGGCTGGCAGGGAAGTTGGAGGAGAGTCCAAGGAGATCAAAGCATATAATCATTGTCTTCCATAGAATGGAATGTAGGAGAGAGAACGTACCAATAGAACACTTAGATGTGTTATCAAAGGTAATTCTTTACTCTCTGTTTATTTTAAATATTTTTTGAACCTTTGTGCACTTCAAATCTTGATGTCTCTAGTTCTTGCTCTCTTGCTGCTAGAGCTGTAATACCTATGCTTTTTTTTATAGAAAATATGTAACTTCTATAAAGAATTATGCTAATTGAAAGCTGTAACTATTTGTTGCAGAAATACTCAGACTTGAAGCATGATCTGGTAAGGACAGAACGCCATCTACTGAAAGAGATGGGGTTTATTTGCCATGTAGAGCACCCTCATAAGTTCATATCTAACTACCTTGCAACACTTGAAGCCCCCGAACTGACGCAAGAGGCATGGAACCTTGCCAACGATAGGTACTTCATTTGAACTAAACTTACCTTATTGTAGTTAGATATTCTTATTGAATTTATGCAGTTCAATTATATCTTACTCTTAAGTCTTAACTAGTTTTTTATAGTCCTTGGGAGGTATTTCTAGTTGTAGACTATTAAGGCTGTGTTTGGCAGCTTGTGTTCCCAACCCCTCTCCCTTGTTTTCTGCGCGCACGCTTTTCAAACTACTAAATGGTGTGTTTTTTTGCAAAAAAATTTCTATAGGAAAGTTTCTTAAAAAAATCCATTTTTTTTAAGTAAATTTTAGCTAATACTTTATTAATTATGCGATAATAAGCTGTTACATTTTCCTTGCCGGAGGGATAGACTCCCAACCGGCACAAACGAACACAGCCTAATTGTACCTGTTATCTTATAATAACTCCCAAGGACCAAAAATAATAATATATTCTACCTTATTGGTGGAATTTTGTTTTAGTTTAGAATTATTGGTTCTCTTAAAAGATTTTTCCAGCATTGCTCTTGACTTTTCTCTTCTTATAGTACTTTGTTTGTCTCGCAGATCCTTACCATTTCTAATTAACTATTGAAAAGCTTGACTAAGTGATACCTTTTATTTTCTGTAGTCATCTGTCTGTATCATGTCATATATGTACAAGAATCCTTAATATTCTGATCAGTGCAAATTATGAATGAGTTGCCTGTAGTTTCAGAATGTGCAAATTTGCTAATTGCAACAGCAAAAATCAAATAGGGGCTAAAATGCTAAATGAACTGTATTCTGAACATATAGTTCTCCCTTATGCTATCATATGTATAGAGTTGTAGATAGTGCTCTGGTACAGAATGATAACAGTTAACAAATAACAAATCTTCCCATGACAGTGATAAGATCCAGTTAACCTAGTGCAGGTTTGCAGTTTCAGCAATATGAATGCAGCGTTGTTAAAGGTGCCCTTAGACCAAAACAAGCCTTCAATAATAATCGCATTAGCTTTTGGATTTTGAAAACTTATAGTCACATATGGTGCTGGCCCAAGTTACAAGAAGTATGATTATGCTGTAGAACTTGTGGATGAACTTGATGGCCAATACAATATTTTTTATAAAAAATATGAGTATGTTACCAAAATGTTGTTAGCTGATGATCAGCCTACTTCATTGGAAGATTATCACGTATGTTGTATGAAAATCTCATTTATATCTCTTAGCTTCAGTAAGATAAGTGGAAGAAAAGAAAAGAAAGCAAGGGAAATGTAACGTGTTAGCACTCTTGGTCTAATGCAACCATAATTTATTGTGCCTTTACCGAGATGACTTTTATTTTTTTTTCATGTAATAGTATATTTAGATGACCAACCTATTTGCCAAGATGATGCCTGTGCCATCTCATAAGGAATGCATGTGTCAAAATATTTTAGAATTTCAAGTCTGATCAGTCAGGATTTAGTGTACCATAAAATATATTTATTATCAAGGCTTACTGCTTTTGCCTTGAGCTTTTTCAATCATACTGAGAGTTGAGTTCAATTTGCACTTCTAATTCAATGCGTATTTTGCATAACAGCTTGCGGACAACTTTATGTGTAAGATTCAAGAGTGAAGTTGTAGCATGTGGAGTTGTGTATGCTGCAGCAAGGAGGCATGGCGTGCCCCTCCCTGAAGATCCCCCCTGGTGGAATGTGTTTGATGCTGATGAGGCAGGAATTCAGGAAGTTTGCAGAGTTCTTGCTCATCTCTACAGCCTCCCCAAGTCACAATATATACAAGTGTATAAGGACAATGATTCCTTCACGCATAGGAGGACTTCTGATACAAATGCTTCAAAGGTTAAAAAGAATGATTGGACTCGCTAAGTTTAATTTAAAAAAATTGTTACCGATGTCATTTTTTTGTACTCATGTGCAGGAAAGTCCTGCAACGACTGTTGCAAGCGATAAGGGTACCCCTGTACCGTCAAGTTCTAGCCAGGAAAAGGATGCACTGATTAAGGCAGAGTCAGACAATGTGAAAGAAAAATGTGACGATGATGGAAAGACATTGCCTTCTGAACCCAATGGTAAAGAAGGCCCTGCAGTGAATTTGAAGAGTGAGAAGTCAGAATCCAATGTTGATCGCTCTCGGGAAAGAGAAAGAGATAGATCAAGAGGGCGGGACCGTGATAGCAGGGGCAGGGACTCTGATCGTGATAGCAAGGGCAGGGACTCCGATCGGGAGAGGGAGCGTGACAGAGAAGCAGACAGGGATAGGCAGCGGAGACACCATTCTAAGGACAGAAGTTCAGGTATTGCCATTGATTATTCTGCTTTGGCTCTTTTTATAAGCATGTTACGTTTTCCTGATGTTGCATGGTGCCCCTCCAATGCAGGATACTCTGACAAAGAGAAGTCAAGGCACCGCTCATCAAGAGGTATGTTAGCACATTAGCGGCCCTCATCTATATATCTGTTTTCATATCTGCTTCATTTTGGCTACCTTTTCAGATCGTGGTGATCACTACAGTTCGCACTCATCTCGTGACAAAGATCGGCACAGGCGGCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001609

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA001609&oldid=39333"